A citation-based method for searching scientific literature

Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella, Jolene Kidney, Hong Gu, Yimei Mao, Bryan M Hooks, Edward S Boyden, György Buzsáki, Jan Marino Ramirez, Allan R Jones, Karel Svoboda, Xue Han, Eric E Turner, Hongkui Zeng. Nat Neurosci 2012
Times Cited: 781







List of co-cited articles
656 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
19

A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex.
Hiroki Taniguchi, Miao He, Priscilla Wu, Sangyong Kim, Raehum Paik, Ken Sugino, Duda Kvitsiani, Yu Fu, Jiangteng Lu, Ying Lin,[...]. Neuron 2011
19

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
665
10

DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
885
10

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
9


Melanocortin-4 receptors expressed by cholinergic neurons regulate energy balance and glucose homeostasis.
Jari Rossi, Nina Balthasar, David Olson, Michael Scott, Eric Berglund, Charlotte E Lee, Michelle J Choi, Danielle Lauzon, Bradford B Lowell, Joel K Elmquist. Cell Metab 2011
410
9

A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality.
Tanya L Daigle, Linda Madisen, Travis A Hage, Matthew T Valley, Ulf Knoblich, Rylan S Larsen, Marc M Takeno, Lawrence Huang, Hong Gu, Rachael Larsen,[...]. Cell 2018
268
9

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
9

A developmental switch in the response of DRG neurons to ETS transcription factor signaling.
Simon Hippenmeyer, Eline Vrieseling, Markus Sigrist, Thomas Portmann, Celia Laengle, David R Ladle, Silvia Arber. PLoS Biol 2005
712
9

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
8

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
7

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
6

A cortical circuit for gain control by behavioral state.
Yu Fu, Jason M Tucciarone, J Sebastian Espinosa, Nengyin Sheng, Daniel P Darcy, Roger A Nicoll, Z Josh Huang, Michael P Stryker. Cell 2014
517
6

Distinct behavioural and network correlates of two interneuron types in prefrontal cortex.
D Kvitsiani, S Ranade, B Hangya, H Taniguchi, J Z Huang, A Kepecs. Nature 2013
277
6

Shared and distinct transcriptomic cell types across neocortical areas.
Bosiljka Tasic, Zizhen Yao, Lucas T Graybuck, Kimberly A Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N Economo, Sarada Viswanathan,[...]. Nature 2018
617
6

Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems.
Ken Y Chan, Min J Jang, Bryan B Yoo, Alon Greenbaum, Namita Ravi, Wei-Li Wu, Luis Sánchez-Guardado, Carlos Lois, Sarkis K Mazmanian, Benjamin E Deverman,[...]. Nat Neurosci 2017
510
6

Regulation of parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry.
Alexxai V Kravitz, Benjamin S Freeze, Philip R L Parker, Kenneth Kay, Myo T Thwin, Karl Deisseroth, Anatol C Kreitzer. Nature 2010
5


Inhibition of inhibition in visual cortex: the logic of connections between molecularly distinct interneurons.
Carsten K Pfeffer, Mingshan Xue, Miao He, Z Josh Huang, Massimo Scanziani. Nat Neurosci 2013
750
5

Three groups of interneurons account for nearly 100% of neocortical GABAergic neurons.
Bernardo Rudy, Gordon Fishell, SooHyun Lee, Jens Hjerling-Leffler. Dev Neurobiol 2011
801
5

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
568
5

Neural mechanisms of movement planning: motor cortex and beyond.
Karel Svoboda, Nuo Li. Curr Opin Neurobiol 2018
130
5

A disinhibitory circuit mediates motor integration in the somatosensory cortex.
Soohyun Lee, Illya Kruglikov, Z Josh Huang, Gord Fishell, Bernardo Rudy. Nat Neurosci 2013
439
5

Distributed coding of choice, action and engagement across the mouse brain.
Nicholas A Steinmetz, Peter Zatka-Haas, Matteo Carandini, Kenneth D Harris. Nature 2019
191
5

Distinct descending motor cortex pathways and their roles in movement.
Michael N Economo, Sarada Viswanathan, Bosiljka Tasic, Erhan Bas, Johan Winnubst, Vilas Menon, Lucas T Graybuck, Thuc Nghi Nguyen, Kimberly A Smith, Zizhen Yao,[...]. Nature 2018
152
5

BRAIN CIRCUITS. A parvalbumin-positive excitatory visual pathway to trigger fear responses in mice.
Congping Shang, Zhihui Liu, Zijun Chen, Yingchao Shi, Qian Wang, Su Liu, Dapeng Li, Peng Cao. Science 2015
159
5

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
298
5

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
581
5

Spatiotemporal constraints on optogenetic inactivation in cortical circuits.
Nuo Li, Susu Chen, Zengcai V Guo, Han Chen, Yan Huo, Hidehiko K Inagaki, Guang Chen, Courtney Davis, David Hansel, Caiying Guo,[...]. Elife 2019
67
7

Cell type–specific channelrhodopsin-2 transgenic mice for optogenetic dissection of neural circuitry function.
Shengli Zhao, Jonathan T Ting, Hisham E Atallah, Li Qiu, Jie Tan, Bernd Gloss, George J Augustine, Karl Deisseroth, Minmin Luo, Ann M Graybiel,[...]. Nat Methods 2011
445
5

Parvalbumin neurons and gamma rhythms enhance cortical circuit performance.
Vikaas S Sohal, Feng Zhang, Ofer Yizhar, Karl Deisseroth. Nature 2009
4

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
4

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
4

Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
628
4

A Cre-inducible diphtheria toxin receptor mediates cell lineage ablation after toxin administration.
Thorsten Buch, Frank L Heppner, Christine Tertilt, Tobias J A J Heinen, Marcel Kremer, F Thomas Wunderlich, Steffen Jung, Ari Waisman. Nat Methods 2005
586
4

A cortico-cerebellar loop for motor planning.
Zhenyu Gao, Courtney Davis, Alyse M Thomas, Michael N Economo, Amada M Abrego, Karel Svoboda, Chris I De Zeeuw, Nuo Li. Nature 2018
156
4

Driving fast-spiking cells induces gamma rhythm and controls sensory responses.
Jessica A Cardin, Marie Carlén, Konstantinos Meletis, Ulf Knoblich, Feng Zhang, Karl Deisseroth, Li-Huei Tsai, Christopher I Moore. Nature 2009
4

Hierarchical organization of cortical and thalamic connectivity.
Julie A Harris, Stefan Mihalas, Karla E Hirokawa, Jennifer D Whitesell, Hannah Choi, Amy Bernard, Phillip Bohn, Shiella Caldejon, Linzy Casal, Andrew Cho,[...]. Nature 2019
157
4

Flow of cortical activity underlying a tactile decision in mice.
Zengcai V Guo, Nuo Li, Daniel Huber, Eran Ophir, Diego Gutnisky, Jonathan T Ting, Guoping Feng, Karel Svoboda. Neuron 2014
344
4

Cortical interneurons that specialize in disinhibitory control.
Hyun-Jae Pi, Balázs Hangya, Duda Kvitsiani, Joshua I Sanders, Z Josh Huang, Adam Kepecs. Nature 2013
639
4

AAV-Mediated Anterograde Transsynaptic Tagging: Mapping Corticocollicular Input-Defined Neural Pathways for Defense Behaviors.
Brian Zingg, Xiao-Lin Chou, Zheng-Gang Zhang, Lukas Mesik, Feixue Liang, Huizhong Whit Tao, Li I Zhang. Neuron 2017
307
4

The largest group of superficial neocortical GABAergic interneurons expresses ionotropic serotonin receptors.
SooHyun Lee, Jens Hjerling-Leffler, Edward Zagha, Gord Fishell, Bernardo Rudy. J Neurosci 2010
395
4

Cell-Type-Specific Control of Brainstem Locomotor Circuits by Basal Ganglia.
Thomas K Roseberry, A Moses Lee, Arnaud L Lalive, Linda Wilbrecht, Antonello Bonci, Anatol C Kreitzer. Cell 2016
192
4

The subcellular organization of neocortical excitatory connections.
Leopoldo Petreanu, Tianyi Mao, Scott M Sternson, Karel Svoboda. Nature 2009
668
4

Bcl-x is required for proper development of the mouse substantia nigra.
Joseph M Savitt, Susie S Jang, Weitong Mu, Valina L Dawson, Ted M Dawson. J Neurosci 2005
106
4


NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
4

Evolving the lock to fit the key to create a family of G protein-coupled receptors potently activated by an inert ligand.
Blaine N Armbruster, Xiang Li, Mark H Pausch, Stefan Herlitze, Bryan L Roth. Proc Natl Acad Sci U S A 2007
4

PINP: a new method of tagging neuronal populations for identification during in vivo electrophysiological recording.
Susana Q Lima, Tomás Hromádka, Petr Znamenskiy, Anthony M Zador. PLoS One 2009
236
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.