A citation-based method for searching scientific literature

Michaela Vorlíčková, Iva Kejnovská, Janos Sagi, Daniel Renčiuk, Klára Bednářová, Jitka Motlová, Jaroslav Kypr. Methods 2012
Times Cited: 256







List of co-cited articles
903 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
23

Circular dichroism and conformational polymorphism of DNA.
Jaroslav Kypr, Iva Kejnovská, Daniel Renciuk, Michaela Vorlícková. Nucleic Acids Res 2009
922
22

Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
227
21

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
735
21

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
19

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
781
19

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
18

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
18

G-Quadruplex Secondary Structure Obtained from Circular Dichroism Spectroscopy.
Rafael Del Villar-Guerra, John O Trent, Jonathan B Chaires. Angew Chem Int Ed Engl 2018
167
18

Following G-quartet formation by UV-spectroscopy.
J L Mergny, A T Phan, L Lacroix. FEBS Lett 1998
531
17

Circular dichroism of quadruplex DNAs: applications to structure, cation effects and ligand binding.
Sattanathan Paramasivan, Iulian Rujan, Philip H Bolton. Methods 2007
369
17

Topological characterization of nucleic acid G-quadruplexes by UV absorption and circular dichroism.
Andreas Ioannis Karsisiotis, Nason Ma'ani Hessari, Ettore Novellino, Gian Piero Spada, Antonio Randazzo, Mateus Webba da Silva. Angew Chem Int Ed Engl 2011
251
17

A non-empirical chromophoric interpretation of CD spectra of DNA G-quadruplex structures.
Stefano Masiero, Roberta Trotta, Silvia Pieraccini, Stefano De Tito, Rosaria Perone, Antonio Randazzo, Gian Piero Spada. Org Biomol Chem 2010
193
17

Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold.
Kim Ngoc Luu, Anh Tuân Phan, Vitaly Kuryavyi, Laurent Lacroix, Dinshaw J Patel. J Am Chem Soc 2006
585
16

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
400
15


Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
14

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
14

QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
Oleg Kikin, Lawrence D'Antonio, Paramjeet S Bagga. Nucleic Acids Res 2006
493
14

NMR spectroscopy of G-quadruplexes.
Michael Adrian, Brahim Heddi, Anh Tuân Phan. Methods 2012
161
13

G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Nucleic Acids Res 2018
177
13


Circular dichroism of quadruplex structures.
Antonio Randazzo, Gian Piero Spada, Mateus Webba da Silva. Top Curr Chem 2013
127
11

Circular dichroism spectroscopy of DNA: from duplexes to quadruplexes.
Michaela Vorlíčková, Iva Kejnovská, Klára Bednářová, Daniel Renčiuk, Jaroslav Kypr. Chirality 2012
147
11


Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
11

G-quadruplex structures: in vivo evidence and function.
Hans J Lipps, Daniela Rhodes. Trends Cell Biol 2009
551
11

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
840
11

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
574
11



An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation.
Sunita Kumari, Anthony Bugaut, Julian L Huppert, Shankar Balasubramanian. Nat Chem Biol 2007
517
10

High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity.
Irene Russo Krauss, Antonello Merlino, Antonio Randazzo, Ettore Novellino, Lelio Mazzarella, Filomena Sica. Nucleic Acids Res 2012
156
9

Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution.
R F Macaya, P Schultze, F W Smith, J A Roe, J Feigon. Proc Natl Acad Sci U S A 1993
669
9

Thermal difference spectra: a specific signature for nucleic acid structures.
Jean-Louis Mergny, Jing Li, Laurent Lacroix, Samir Amrane, Jonathan B Chaires. Nucleic Acids Res 2005
286
9

Selection of single-stranded DNA molecules that bind and inhibit human thrombin.
L C Bock, L C Griffin, J A Latham, E H Vermaas, J J Toole. Nature 1992
8


Polymorphism of human telomeric quadruplex structures.
Jixun Dai, Megan Carver, Danzhou Yang. Biochimie 2008
293
8

Biophysical and biological properties of quadruplex oligodeoxyribonucleotides.
Virna Dapić, Vedra Abdomerović, Rachel Marrington, Jemma Peberdy, Alison Rodger, John O Trent, Paula J Bates. Nucleic Acids Res 2003
303
8

Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers.
Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
324
8


How long is too long? Effects of loop size on G-quadruplex stability.
Aurore Guédin, Julien Gros, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2010
264
8

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
686
8

G-quadruplexes: the beginning and end of UTRs.
Julian Leon Huppert, Anthony Bugaut, Sunita Kumari, Shankar Balasubramanian. Nucleic Acids Res 2008
284
8


UV Melting of G-Quadruplexes.
Jean-Louis Mergny, Laurent Lacroix. Curr Protoc Nucleic Acid Chem 2009
94
8

Mapping and characterization of G-quadruplexes in Mycobacterium tuberculosis gene promoter regions.
Rosalba Perrone, Enrico Lavezzo, Erika Riello, Riccardo Manganelli, Giorgio Palù, Stefano Toppo, Roberta Provvedi, Sara N Richter. Sci Rep 2017
47
17



Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution.
Anh Tuân Phan, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2006
236
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.