A citation-based method for searching scientific literature

Lisa J Martin, Jayanta Gupta, Soma S S K Jyothula, Melinda Butsch Kovacic, Jocelyn M Biagini Myers, Tia L Patterson, Mark B Ericksen, Hua He, Aaron M Gibson, Tesfaye M Baye, Sushil Amirisetty, Anna M Tsoras, Youbao Sha, N Tony Eissa, Gurjit K Khurana Hershey. PLoS One 2012
Times Cited: 93







List of co-cited articles
1208 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Genetic and histologic evidence for autophagy in asthma pathogenesis.
Audrey H Poon, Fazila Chouiali, Sze Man Tse, Augusto A Litonjua, Sabah N A Hussain, Carolyn J Baglole, David H Eidelman, Ronald Olivenstein, James G Martin, Scott T Weiss,[...]. J Allergy Clin Immunol 2012
58
62

ATG5, autophagy and lung function in asthma.
Audrey Poon, David Eidelman, Catherine Laprise, Qutayba Hamid. Autophagy 2012
48
50

Autophagy in immunity and inflammation.
Beth Levine, Noboru Mizushima, Herbert W Virgin. Nature 2011
22

Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production.
Tatsuya Saitoh, Naonobu Fujita, Myoung Ho Jang, Satoshi Uematsu, Bo-Gie Yang, Takashi Satoh, Hiroko Omori, Takeshi Noda, Naoki Yamamoto, Masaaki Komatsu,[...]. Nature 2008
19

Autophagy mechanisms in sputum and peripheral blood cells of patients with severe asthma: a new therapeutic target.
G-Y Ban, D L Pham, T H K Trinh, S-I Lee, D-H Suh, E-M Yang, Y-M Ye, Y S Shin, Y-J Chwae, H-S Park. Clin Exp Allergy 2016
46
39

The Atg5 Atg12 conjugate associates with innate antiviral immune responses.
Nao Jounai, Fumihiko Takeshita, Kouji Kobiyama, Asako Sawano, Atsushi Miyawaki, Ke-Qin Xin, Ken J Ishii, Taro Kawai, Shizuo Akira, Koichi Suzuki,[...]. Proc Natl Acad Sci U S A 2007
394
17

In vivo requirement for Atg5 in antigen presentation by dendritic cells.
Heung Kyu Lee, Lisa M Mattei, Benjamin E Steinberg, Philipp Alberts, Yun Hee Lee, Alexander Chervonsky, Noboru Mizushima, Sergio Grinstein, Akiko Iwasaki. Immunity 2010
303
16

Autophagy and role in asthma.
Soma S S K Jyothula, N Tony Eissa. Curr Opin Pulm Med 2013
31
48

Lack of autophagy induces steroid-resistant airway inflammation.
Yuzo Suzuki, Hadi Maazi, Ishwarya Sankaranarayanan, Jonathan Lam, Bryant Khoo, Pejman Soroosh, Richard G Barbers, J-H James Ou, Jae U Jung, Omid Akbari. J Allergy Clin Immunol 2016
37
40

The role of autophagy during the early neonatal starvation period.
Akiko Kuma, Masahiko Hatano, Makoto Matsui, Akitsugu Yamamoto, Haruaki Nakaya, Tamotsu Yoshimori, Yoshinori Ohsumi, Takeshi Tokuhisa, Noboru Mizushima. Nature 2004
13

Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome.
Kiichi Nakahira, Jeffrey Adam Haspel, Vijay A K Rathinam, Seon-Jin Lee, Tamas Dolinay, Hilaire C Lam, Joshua A Englert, Marlene Rabinovitch, Manuela Cernadas, Hong Pyo Kim,[...]. Nat Immunol 2011
13

Autophagy in thymic epithelium shapes the T-cell repertoire and is essential for tolerance.
Jelena Nedjic, Martin Aichinger, Jan Emmerich, Noboru Mizushima, Ludger Klein. Nature 2008
330
13

A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells.
Ken Cadwell, John Y Liu, Sarah L Brown, Hiroyuki Miyoshi, Joy Loh, Jochen K Lennerz, Chieko Kishi, Wumesh Kc, Javier A Carrero, Steven Hunt,[...]. Nature 2008
960
13

Autophagy in infection, inflammation and immunity.
Vojo Deretic, Tatsuya Saitoh, Shizuo Akira. Nat Rev Immunol 2013
13

IL13 activates autophagy to regulate secretion in airway epithelial cells.
John D Dickinson, Yael Alevy, Nicole P Malvin, Khushbu K Patel, Sean P Gunsten, Michael J Holtzman, Thaddeus S Stappenbeck, Steven L Brody. Autophagy 2016
64
20

A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1.
Jochen Hampe, Andre Franke, Philip Rosenstiel, Andreas Till, Markus Teuber, Klaus Huse, Mario Albrecht, Gabriele Mayr, Francisco M De La Vega, Jason Briggs,[...]. Nat Genet 2007
12

T helper 2 cytokines inhibit autophagic control of intracellular Mycobacterium tuberculosis.
James Harris, Sergio A De Haro, Sharon S Master, Joseph Keane, Esteban A Roberts, Monica Delgado, Vojo Deretic. Immunity 2007
311
12

Autophagy in human health and disease.
Augustine M K Choi, Stefan W Ryter, Beth Levine. N Engl J Med 2013
12

Genetic association of PRDM1-ATG5 intergenic region and autophagy with systemic lupus erythematosus in a Chinese population.
Xu-jie Zhou, Xiao-lan Lu, Ji-cheng Lv, Hai-zhen Yang, Lian-xiang Qin, Ming-hui Zhao, Yin Su, Zhan-guo Li, Hong Zhang. Ann Rheum Dis 2011
135
12

Autophagy in airway diseases: a new frontier in human asthma?
A A Zeki, B Yeganeh, N J Kenyon, M Post, S Ghavami. Allergy 2016
39
30

The role of autophagy in allergic inflammation: a new target for severe asthma.
Jing-Nan Liu, Dong-Hyeon Suh, Hoang Kim Tu Trinh, Yong-Joon Chwae, Hae-Sim Park, Yoo Seob Shin. Exp Mol Med 2016
42
28

Autophagy Activation in Asthma Airways Remodeling.
Kielan D McAlinden, Deepak A Deshpande, Saeid Ghavami, Dia Xenaki, Sukhwinder Singh Sohal, Brian G Oliver, Mehra Haghi, Pawan Sharma. Am J Respir Cell Mol Biol 2019
38
31

A critical role for the autophagy gene Atg5 in T cell survival and proliferation.
Heather H Pua, Ivan Dzhagalov, Mariana Chuck, Noboru Mizushima, You-Wen He. J Exp Med 2007
418
11

The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
11

Autophagy-dependent viral recognition by plasmacytoid dendritic cells.
Heung Kyu Lee, Jennifer M Lund, Balaji Ramanathan, Noboru Mizushima, Akiko Iwasaki. Science 2007
601
11

Activation of autophagy by inflammatory signals limits IL-1β production by targeting ubiquitinated inflammasomes for destruction.
Chong-Shan Shi, Kevin Shenderov, Ning-Na Huang, Juraj Kabat, Mones Abu-Asab, Katherine A Fitzgerald, Alan Sher, John H Kehrl. Nat Immunol 2012
776
11

Autophagy controls IL-1beta secretion by targeting pro-IL-1beta for degradation.
James Harris, Michelle Hartman, Caitrionna Roche, Shijuan G Zeng, Amy O'Shea, Fiona A Sharp, Eimear M Lambe, Emma M Creagh, Douglas T Golenbock, Jurg Tschopp,[...]. J Biol Chem 2011
506
11

The autophagy gene ATG5 plays an essential role in B lymphocyte development.
Brian C Miller, Zijiang Zhao, Linda M Stephenson, Ken Cadwell, Heather H Pua, Heung Kyu Lee, Noboru N Mizushima, Akiko Iwasaki, You-Wen He, Wojciech Swat,[...]. Autophagy 2008
225
10

Autophagy: process and function.
Noboru Mizushima. Genes Dev 2007
10

Autophagy in the pathogenesis of disease.
Beth Levine, Guido Kroemer. Cell 2008
10

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
10

Egr-1 regulates autophagy in cigarette smoke-induced chronic obstructive pulmonary disease.
Zhi-Hua Chen, Hong Pyo Kim, Frank C Sciurba, Seon-Jin Lee, Carol Feghali-Bostwick, Donna B Stolz, Rajiv Dhir, Rodney J Landreneau, Mathew J Schuchert, Samuel A Yousem,[...]. PLoS One 2008
307
10

Plasma cells require autophagy for sustainable immunoglobulin production.
Niccolò Pengo, Maria Scolari, Laura Oliva, Enrico Milan, Federica Mainoldi, Andrea Raimondi, Claudio Fagioli, Arianna Merlini, Elisabetta Mariani, Elena Pasqualetto,[...]. Nat Immunol 2013
232
10

Toll-like receptor signalling in macrophages links the autophagy pathway to phagocytosis.
Miguel A Sanjuan, Christopher P Dillon, Stephen W G Tait, Simon Moshiach, Frank Dorsey, Samuel Connell, Masaaki Komatsu, Keiji Tanaka, John L Cleveland, Sebo Withoff,[...]. Nature 2007
835
10

Autophagy: renovation of cells and tissues.
Noboru Mizushima, Masaaki Komatsu. Cell 2011
10

Guidelines for the use and interpretation of assays for monitoring autophagy.
Daniel J Klionsky, Fabio C Abdalla, Hagai Abeliovich, Robert T Abraham, Abraham Acevedo-Arozena, Khosrow Adeli, Lotta Agholme, Maria Agnello, Patrizia Agostinis, Julio A Aguirre-Ghiso,[...]. Autophagy 2012
10

Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci.
John B Harley, Marta E Alarcón-Riquelme, Lindsey A Criswell, Chaim O Jacob, Robert P Kimberly, Kathy L Moser, Betty P Tsao, Timothy J Vyse, Carl D Langefeld, Swapan K Nath,[...]. Nat Genet 2008
896
9

Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis.
Shida Yousefi, Remo Perozzo, Inès Schmid, Andrew Ziemiecki, Thomas Schaffner, Leonardo Scapozza, Thomas Brunner, Hans-Uwe Simon. Nat Cell Biol 2006
849
9

Defective CFTR induces aggresome formation and lung inflammation in cystic fibrosis through ROS-mediated autophagy inhibition.
Alessandro Luciani, Valeria Rachela Villella, Speranza Esposito, Nicola Brunetti-Pierri, Diego Medina, Carmine Settembre, Manuela Gavina, Laura Pulze, Ida Giardino, Massimo Pettoello-Mantovani,[...]. Nat Cell Biol 2010
317
9

Autophagy-based unconventional secretory pathway for extracellular delivery of IL-1β.
Nicolas Dupont, Shanya Jiang, Manohar Pilli, Wojciech Ornatowski, Dhruva Bhattacharya, Vojo Deretic. EMBO J 2011
516
9

ATG5 regulates plasma cell differentiation.
Kara L Conway, Petric Kuballa, Bernard Khor, Mei Zhang, Hai Ning Shi, Herbert W Virgin, Ramnik J Xavier. Autophagy 2013
94
9

Absence of autophagy results in reactive oxygen species-dependent amplification of RLR signaling.
Michal Caspi Tal, Miwa Sasai, Heung Kyu Lee, Brian Yordy, Gerald S Shadel, Akiko Iwasaki. Proc Natl Acad Sci U S A 2009
378
9

Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy.
Daniel F Egan, David B Shackelford, Maria M Mihaylova, Sara Gelino, Rebecca A Kohnz, William Mair, Debbie S Vasquez, Aashish Joshi, Dana M Gwinn, Rebecca Taylor,[...]. Science 2011
9

Selective autophagy of the adaptor protein Bcl10 modulates T cell receptor activation of NF-κB.
Suman Paul, Anuj K Kashyap, Wei Jia, You-Wen He, Brian C Schaefer. Immunity 2012
131
9

Identification of a candidate therapeutic autophagy-inducing peptide.
Sanae Shoji-Kawata, Rhea Sumpter, Matthew Leveno, Grant R Campbell, Zhongju Zou, Lisa Kinch, Angela D Wilkins, Qihua Sun, Kathrin Pallauf, Donna MacDuff,[...]. Nature 2013
450
9

Autophagy protects against active tuberculosis by suppressing bacterial burden and inflammation.
Eliseo F Castillo, Alexander Dekonenko, John Arko-Mensah, Michael A Mandell, Nicolas Dupont, Shanya Jiang, Monica Delgado-Vargas, Graham S Timmins, Dhruva Bhattacharya, Hongliang Yang,[...]. Proc Natl Acad Sci U S A 2012
267
9

Recessive mutations in EPG5 cause Vici syndrome, a multisystem disorder with defective autophagy.
Thomas Cullup, Ay Lin Kho, Carlo Dionisi-Vici, Birgit Brandmeier, Frances Smith, Zoe Urry, Michael A Simpson, Shu Yau, Enrico Bertini, Verity McClelland,[...]. Nat Genet 2013
144
9

Association of autophagy related gene polymorphisms with neutrophilic airway inflammation in adult asthma.
Duy Le Pham, Seung-Hyun Kim, Purevsuren Losol, Eun-Mi Yang, Yoo Seob Shin, Young-Min Ye, Hae-Sim Park. Korean J Intern Med 2016
22
40

Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12-Apg5 conjugate.
Noboru Mizushima, Akiko Kuma, Yoshinori Kobayashi, Akitsugu Yamamoto, Masami Matsubae, Toshifumi Takao, Tohru Natsume, Yoshinori Ohsumi, Tamotsu Yoshimori. J Cell Sci 2003
483
8

Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice.
Taichi Hara, Kenji Nakamura, Makoto Matsui, Akitsugu Yamamoto, Yohko Nakahara, Rika Suzuki-Migishima, Minesuke Yokoyama, Kenji Mishima, Ichiro Saito, Hideyuki Okano,[...]. Nature 2006
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.