A citation-based method for searching scientific literature

Aboudi M Moabbi, Neha Agarwal, Belal El Kaderi, Athar Ansari. Proc Natl Acad Sci U S A 2012
Times Cited: 64







List of co-cited articles
454 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


How introns influence and enhance eukaryotic gene expression.
Hervé Le Hir, Ajit Nott, Melissa J Moore. Trends Biochem Sci 2003
455
31

The enduring mystery of intron-mediated enhancement.
Jenna E Gallegos, Alan B Rose. Plant Sci 2015
70
29

Introns increase gene expression in cultured maize cells.
J Callis, M Fromm, V Walbot. Genes Dev 1987
441
28

Gene loops enhance transcriptional directionality.
Sue Mei Tan-Wong, Judith B Zaugg, Jurgi Camblong, Zhenyu Xu, David W Zhang, Hannah E Mischo, Aseem Z Ansari, Nicholas M Luscombe, Lars M Steinmetz, Nick J Proudfoot. Science 2012
153
23

Promoter proximal splice sites enhance transcription.
Andre Furger, Justin M O'Sullivan, Alexandra Binnie, Barbara A Lee, Nick J Proudfoot. Genes Dev 2002
183
23



A transcription-independent role for TFIIB in gene looping.
Badri Nath Singh, Michael Hampsey. Mol Cell 2007
126
20

A physiological role for gene loops in yeast.
Jean-Philippe Lainé, Badri Nath Singh, Shankarling Krishnamurthy, Michael Hampsey. Genes Dev 2009
109
20


Intron-mediated regulation of gene expression.
A B Rose. Curr Top Microbiol Immunol 2008
145
20

Gene looping is conferred by activator-dependent interaction of transcription initiation and termination machineries.
Belal El Kaderi, Scott Medler, Sarita Raghunayakula, Athar Ansari. J Biol Chem 2009
50
24


Heterologous introns can enhance expression of transgenes in mice.
R D Palmiter, E P Sandgren, M R Avarbock, D D Allen, R L Brinster. Proc Natl Acad Sci U S A 1991
401
18

Gene loops function to maintain transcriptional memory through interaction with the nuclear pore complex.
Sue Mei Tan-Wong, Hashanthi D Wijayatilake, Nick J Proudfoot. Genes Dev 2009
194
17

The effects of a stimulating intron on the expression of heterologous genes in Arabidopsis thaliana.
Shahram Emami, Dinah Arumainayagam, Ian Korf, Alan B Rose. Plant Biotechnol J 2013
27
40


First exon length controls active chromatin signatures and transcription.
Nicole I Bieberstein, Fernando Carrillo Oesterreich, Korinna Straube, Karla M Neugebauer. Cell Rep 2012
114
17

Intron-mediated enhancement of heterologous gene expression in maize.
D Mascarenhas, I J Mettler, D A Pierce, H W Lowe. Plant Mol Biol 1990
145
17

How introns enhance gene expression.
Orit Shaul. Int J Biochem Cell Biol 2017
106
17

Gene loops juxtapose promoters and terminators in yeast.
Justin M O'Sullivan, Sue Mei Tan-Wong, Antonin Morillon, Barbara Lee, Joel Coles, Jane Mellor, Nick J Proudfoot. Nat Genet 2004
267
15

Exon junction complexes mediate the enhancing effect of splicing on mRNA expression.
Heather L Wiegand, Shihua Lu, Bryan R Cullen. Proc Natl Acad Sci U S A 2003
173
15




Evidence for a complex of transcription factor IIB with poly(A) polymerase and cleavage factor 1 subunits required for gene looping.
Scott Medler, Nadra Al Husini, Sarita Raghunayakula, Banupriya Mukundan, Ashley Aldea, Athar Ansari. J Biol Chem 2011
30
30

U1 snRNA associates with TFIIH and regulates transcriptional initiation.
Kon Yew Kwek, Shona Murphy, Andre Furger, Benjamin Thomas, William O'Gorman, Hiroshi Kimura, Nick J Proudfoot, Alexandre Akoulitchev. Nat Struct Biol 2002
195
14

Introns regulate RNA and protein abundance in yeast.
Kara Juneau, Molly Miranda, Maureen E Hillenmeyer, Corey Nislow, Ronald W Davis. Genetics 2006
68
14

A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo.
Christian Kroun Damgaard, Søren Kahns, Søren Lykke-Andersen, Anders Lade Nielsen, Torben Heick Jensen, Jørgen Kjems. Mol Cell 2008
117
14

Distinct roles of the first introns on the expression of Arabidopsis profilin gene family members.
Young-Min Jeong, Jeong-Hwan Mun, Ilha Lee, Je Chang Woo, Choo Bong Hong, Sang-Gu Kim. Plant Physiol 2006
78
14

Introns increase transcriptional efficiency in transgenic mice.
R L Brinster, J M Allen, R R Behringer, R E Gelinas, R D Palmiter. Proc Natl Acad Sci U S A 1988
599
14


Evidence for a DNA-Based Mechanism of Intron-Mediated Enhancement.
Alan B Rose, Shahram Emami, Keith Bradnam, Ian Korf. Front Plant Sci 2011
29
27

Sequence requirements for myosin gene expression and regulation in Caenorhabditis elegans.
P G Okkema, S W Harrison, V Plunger, A Aryana, A Fire. Genetics 1993
314
12



Intron sequences that stimulate gene expression in Arabidopsis.
Alan B Rose, Amanda Carter, Ian Korf, Noah Kojima. Plant Mol Biol 2016
24
33

Capturing chromosome conformation.
Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
10



The function of introns.
Michal Chorev, Liran Carmel. Front Genet 2012
165
10



An ending is a new beginning: transcription termination supports re-initiation.
Søren Lykke-Andersen, Christophe K Mapendano, Torben Heick Jensen. Cell Cycle 2011
26
23

A quantitative analysis of intron effects on mammalian gene expression.
Ajit Nott, Shlomo H Meislin, Melissa J Moore. RNA 2003
304
9



Intron position affects expression from the tpi promoter in rice.
K C Snowden, W G Buchhholz, T C Hall. Plant Mol Biol 1996
28
21


A role for CF1A 3' end processing complex in promoter-associated transcription.
Nadra Al Husini, Paul Kudla, Athar Ansari. PLoS Genet 2013
18
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.