A citation-based method for searching scientific literature

Matthew N Davies, Manuela Volta, Ruth Pidsley, Katie Lunnon, Abhishek Dixit, Simon Lovestone, Cristian Coarfa, R Alan Harris, Aleksandar Milosavljevic, Claire Troakes, Safa Al-Sarraj, Richard Dobson, Leonard C Schalkwyk, Jonathan Mill. Genome Biol 2012
Times Cited: 441







List of co-cited articles
905 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Correspondence of DNA Methylation Between Blood and Brain Tissue and Its Application to Schizophrenia Research.
Esther Walton, Johanna Hass, Jingyu Liu, Joshua L Roffman, Fabio Bernardoni, Veit Roessner, Matthias Kirsch, Gabriele Schackert, Vince Calhoun, Stefan Ehrlich. Schizophr Bull 2016
135
17


Aging effects on DNA methylation modules in human brain and blood tissue.
Steve Horvath, Yafeng Zhang, Peter Langfelder, René S Kahn, Marco P M Boks, Kristel van Eijk, Leonard H van den Berg, Roel A Ophoff. Genome Biol 2012
345
16

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis.
Pan Du, Xiao Zhang, Chiang-Ching Huang, Nadereh Jafari, Warren A Kibbe, Lifang Hou, Simon M Lin. BMC Bioinformatics 2010
953
16

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Martin J Aryee, Andrew E Jaffe, Hector Corrada-Bravo, Christine Ladd-Acosta, Andrew P Feinberg, Kasper D Hansen, Rafael A Irizarry. Bioinformatics 2014
15

DNA methylation arrays as surrogate measures of cell mixture distribution.
Eugene Andres Houseman, William P Accomando, Devin C Koestler, Brock C Christensen, Carmen J Marsit, Heather H Nelson, John K Wiencke, Karl T Kelsey. BMC Bioinformatics 2012
15

Genome-wide DNA methylation comparison between live human brain and peripheral tissues within individuals.
Patricia R Braun, Shizhong Han, Benjamin Hing, Yasunori Nagahama, Lindsey N Gaul, Jonathan T Heinzman, Andrew J Grossbach, Liesl Close, Brian J Dlouhy, Matthew A Howard,[...]. Transl Psychiatry 2019
87
16

DNA extracted from saliva for methylation studies of psychiatric traits: evidence tissue specificity and relatedness to brain.
Alicia K Smith, Varun Kilaru, Torsten Klengel, Kristina B Mercer, Bekh Bradley, Karen N Conneely, Kerry J Ressler, Elisabeth B Binder. Am J Med Genet B Neuropsychiatr Genet 2015
178
13

Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse.
Patrick O McGowan, Aya Sasaki, Ana C D'Alessio, Sergiy Dymov, Benoit Labonté, Moshe Szyf, Gustavo Turecki, Michael J Meaney. Nat Neurosci 2009
13

Epigenetic programming by maternal behavior.
Ian C G Weaver, Nadia Cervoni, Frances A Champagne, Ana C D'Alessio, Shakti Sharma, Jonathan R Seckl, Sergiy Dymov, Moshe Szyf, Michael J Meaney. Nat Neurosci 2004
12

Global epigenomic reconfiguration during mammalian brain development.
Ryan Lister, Eran A Mukamel, Joseph R Nery, Mark Urich, Clare A Puddifoot, Nicholas D Johnson, Jacinta Lucero, Yun Huang, Andrew J Dwork, Matthew D Schultz,[...]. Science 2013
12

BECon: a tool for interpreting DNA methylation findings from blood in the context of brain.
R D Edgar, M J Jones, M J Meaney, G Turecki, M S Kobor. Transl Psychiatry 2017
87
13

Allele-specific FKBP5 DNA demethylation mediates gene-childhood trauma interactions.
Torsten Klengel, Divya Mehta, Christoph Anacker, Monika Rex-Haffner, Jens C Pruessner, Carmine M Pariante, Thaddeus W W Pace, Kristina B Mercer, Helen S Mayberg, Bekh Bradley,[...]. Nat Neurosci 2013
770
11


Methylation QTLs in the developing brain and their enrichment in schizophrenia risk loci.
Eilis Hannon, Helen Spiers, Joana Viana, Ruth Pidsley, Joe Burrage, Therese M Murphy, Claire Troakes, Gustavo Turecki, Michael C O'Donovan, Leonard C Schalkwyk,[...]. Nat Neurosci 2016
175
9


Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray.
Yi-an Chen, Mathieu Lemire, Sanaa Choufani, Darci T Butcher, Daria Grafodatskaya, Brent W Zanke, Steven Gallinger, Thomas J Hudson, Rosanna Weksberg. Epigenetics 2013
794
9

Prenatal exposure to maternal depression, neonatal methylation of human glucocorticoid receptor gene (NR3C1) and infant cortisol stress responses.
Tim F Oberlander, Joanne Weinberg, Michael Papsdorf, Ruth Grunau, Shaila Misri, Angela M Devlin. Epigenetics 2008
822
8

Methylome-wide association study of schizophrenia: identifying blood biomarker signatures of environmental insults.
Karolina A Aberg, Joseph L McClay, Srilaxmi Nerella, Shaunna Clark, Gaurav Kumar, Wenan Chen, Amit N Khachane, Linying Xie, Alexandra Hudson, Guimin Gao,[...]. JAMA Psychiatry 2014
145
8

Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain.
J Raphael Gibbs, Marcel P van der Brug, Dena G Hernandez, Bryan J Traynor, Michael A Nalls, Shiao-Lin Lai, Sampath Arepalli, Allissa Dillman, Ian P Rafferty, Juan Troncoso,[...]. PLoS Genet 2010
559
8

An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation.
Eilis Hannon, Emma Dempster, Joana Viana, Joe Burrage, Adam R Smith, Ruby Macdonald, David St Clair, Colette Mustard, Gerome Breen, Sebastian Therman,[...]. Genome Biol 2016
139
8

Epigenomic profiling reveals DNA-methylation changes associated with major psychosis.
Jonathan Mill, Thomas Tang, Zachary Kaminsky, Tarang Khare, Simin Yazdanpanah, Luigi Bouchard, Peixin Jia, Abbas Assadzadeh, James Flanagan, Axel Schumacher,[...]. Am J Hum Genet 2008
515
8

Buccals are likely to be a more informative surrogate tissue than blood for epigenome-wide association studies.
Robert Lowe, Carolina Gemma, Huriya Beyan, Mohammed I Hawa, Alexandra Bazeos, R David Leslie, Alexandre Montpetit, Vardhman K Rakyan, Sreeram V Ramagopalan. Epigenetics 2013
100
8


limma powers differential expression analyses for RNA-sequencing and microarray studies.
Matthew E Ritchie, Belinda Phipson, Di Wu, Yifang Hu, Charity W Law, Wei Shi, Gordon K Smyth. Nucleic Acids Res 2015
8


Disease-associated epigenetic changes in monozygotic twins discordant for schizophrenia and bipolar disorder.
Emma L Dempster, Ruth Pidsley, Leonard C Schalkwyk, Sheena Owens, Anna Georgiades, Fergus Kane, Sridevi Kalidindi, Marco Picchioni, Eugenia Kravariti, Timothea Toulopoulou,[...]. Hum Mol Genet 2011
284
7

Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.
Ruth Pidsley, Elena Zotenko, Timothy J Peters, Mitchell G Lawrence, Gail P Risbridger, Peter Molloy, Susan Van Djik, Beverly Muhlhausler, Clare Stirzaker, Susan J Clark. Genome Biol 2016
343
7


Epigenetic vestiges of early developmental adversity: childhood stress exposure and DNA methylation in adolescence.
Marilyn J Essex, W Thomas Boyce, Clyde Hertzman, Lucia L Lam, Jeffrey M Armstrong, Sarah M A Neumann, Michael S Kobor. Child Dev 2013
224
7

Systematic identification of genetic influences on methylation across the human life course.
Tom R Gaunt, Hashem A Shihab, Gibran Hemani, Josine L Min, Geoff Woodward, Oliver Lyttleton, Jie Zheng, Aparna Duggirala, Wendy L McArdle, Karen Ho,[...]. Genome Biol 2016
244
7

Serotonin transporter gene hypomethylation predicts impaired antidepressant treatment response.
Katharina Domschke, Nicola Tidow, Kathrin Schwarte, Jürgen Deckert, Klaus-Peter Lesch, Volker Arolt, Peter Zwanzger, Bernhard T Baune. Int J Neuropsychopharmacol 2014
83
8

DNA methylation and its basic function.
Lisa D Moore, Thuc Le, Guoping Fan. Neuropsychopharmacology 2013
864
7

The signature of maternal rearing in the methylome in rhesus macaque prefrontal cortex and T cells.
Nadine Provençal, Matthew J Suderman, Claire Guillemin, Renaud Massart, Angela Ruggiero, Dongsha Wang, Allyson J Bennett, Peter J Pierre, David P Friedman, Sylvana M Côté,[...]. J Neurosci 2012
192
7


Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
7

Tobacco smoking leads to extensive genome-wide changes in DNA methylation.
Sonja Zeilinger, Brigitte Kühnel, Norman Klopp, Hansjörg Baurecht, Anja Kleinschmidt, Christian Gieger, Stephan Weidinger, Eva Lattka, Jerzy Adamski, Annette Peters,[...]. PLoS One 2013
447
7

Methylomic profiling implicates cortical deregulation of ANK1 in Alzheimer's disease.
Katie Lunnon, Rebecca Smith, Eilis Hannon, Philip L De Jager, Gyan Srivastava, Manuela Volta, Claire Troakes, Safa Al-Sarraj, Joe Burrage, Ruby Macdonald,[...]. Nat Neurosci 2014
273
7

DNA methylation signatures within the human brain.
Christine Ladd-Acosta, Jonathan Pevsner, Sarven Sabunciyan, Robert H Yolken, Maree J Webster, Tiffany Dinkins, Pauline A Callinan, Jian-Bing Fan, James B Potash, Andrew P Feinberg. Am J Hum Genet 2007
196
7

The sva package for removing batch effects and other unwanted variation in high-throughput experiments.
Jeffrey T Leek, W Evan Johnson, Hilary S Parker, Andrew E Jaffe, John D Storey. Bioinformatics 2012
7

Association of DNA Methylation Differences With Schizophrenia in an Epigenome-Wide Association Study.
Carolina Montano, Margaret A Taub, Andrew Jaffe, Eirikur Briem, Jason I Feinberg, Rakel Trygvadottir, Adrian Idrizi, Arni Runarsson, Birna Berndsen, Ruben C Gur,[...]. JAMA Psychiatry 2016
79
8

Selective DNA methylation of BDNF promoter in bipolar disorder: differences among patients with BDI and BDII.
Claudio D'Addario, Bernardo Dell'Osso, Maria Carlotta Palazzo, Beatrice Benatti, Licia Lietti, Elisabetta Cattaneo, Daniela Galimberti, Chiara Fenoglio, Francesca Cortini, Elio Scarpini,[...]. Neuropsychopharmacology 2012
109
6

Genome-wide methylomic analysis of monozygotic twins discordant for adolescent depression.
Emma L Dempster, Chloe C Y Wong, Kathryn J Lester, Joe Burrage, Alice M Gregory, Jonathan Mill, Thalia C Eley. Biol Psychiatry 2014
79
7

ChAMP: 450k Chip Analysis Methylation Pipeline.
Tiffany J Morris, Lee M Butcher, Andrew Feber, Andrew E Teschendorff, Ankur R Chakravarthy, Tomasz K Wojdacz, Stephan Beck. Bioinformatics 2014
385
6

DNA methylation of the serotonin transporter gene in peripheral cells and stress-related changes in hippocampal volume: a study in depressed patients and healthy controls.
Linda Booij, Moshe Szyf, Angela Carballedo, Eva-Maria Frey, Derek Morris, Sergiy Dymov, Farida Vaisheva, Victoria Ly, Ciara Fahey, James Meaney,[...]. PLoS One 2015
73
8

Persistent epigenetic differences associated with prenatal exposure to famine in humans.
Bastiaan T Heijmans, Elmar W Tobi, Aryeh D Stein, Hein Putter, Gerard J Blauw, Ezra S Susser, P Eline Slagboom, L H Lumey. Proc Natl Acad Sci U S A 2008
6

Epigenetic Basis of Mental Illness.
Eric J Nestler, Catherine J Peña, Marija Kundakovic, Amanda Mitchell, Schahram Akbarian. Neuroscientist 2016
131
6

The role of DNA methylation in stress-related psychiatric disorders.
Torsten Klengel, Julius Pape, Elisabeth B Binder, Divya Mehta. Neuropharmacology 2014
151
6

Peripheral SLC6A4 DNA methylation is associated with in vivo measures of human brain serotonin synthesis and childhood physical aggression.
Dongsha Wang, Moshe Szyf, Chawki Benkelfat, Nadine Provençal, Gustavo Turecki, Doretta Caramaschi, Sylvana M Côté, Frank Vitaro, Richard E Tremblay, Linda Booij. PLoS One 2012
126
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.