A citation-based method for searching scientific literature

Bryan A Gibson, W Lee Kraus. Nat Rev Mol Cell Biol 2012
Times Cited: 718







List of co-cited articles
767 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



PARP inhibitors: Synthetic lethality in the clinic.
Christopher J Lord, Alan Ashworth. Science 2017
876
18

The multifaceted roles of PARP1 in DNA repair and chromatin remodelling.
Arnab Ray Chaudhuri, André Nussenzweig. Nat Rev Mol Cell Biol 2017
424
17

Poly(ADP-ribose): novel functions for an old molecule.
Valérie Schreiber, Françoise Dantzer, Jean-Christophe Ame, Gilbert de Murcia. Nat Rev Mol Cell Biol 2006
15

Targeting the DNA repair defect in BRCA mutant cells as a therapeutic strategy.
Hannah Farmer, Nuala McCabe, Christopher J Lord, Andrew N J Tutt, Damian A Johnson, Tobias B Richardson, Manuela Santarosa, Krystyna J Dillon, Ian Hickson, Charlotte Knights,[...]. Nature 2005
15

Specific killing of BRCA2-deficient tumours with inhibitors of poly(ADP-ribose) polymerase.
Helen E Bryant, Niklas Schultz, Huw D Thomas, Kayan M Parker, Dan Flower, Elena Lopez, Suzanne Kyle, Mark Meuth, Nicola J Curtin, Thomas Helleday. Nature 2005
14

Family-wide analysis of poly(ADP-ribose) polymerase activity.
Sejal Vyas, Ivan Matic, Lilen Uchima, Jenny Rood, Roko Zaja, Ronald T Hay, Ivan Ahel, Paul Chang. Nat Commun 2014
246
14

The PARP superfamily.
Jean-Christophe Amé, Catherine Spenlehauer, Gilbert de Murcia. Bioessays 2004
13


Trapping of PARP1 and PARP2 by Clinical PARP Inhibitors.
Junko Murai, Shar-yin N Huang, Benu Brata Das, Amelie Renaud, Yiping Zhang, James H Doroshow, Jiuping Ji, Shunichi Takeda, Yves Pommier. Cancer Res 2012
981
12

Toward a unified nomenclature for mammalian ADP-ribosyltransferases.
Michael O Hottiger, Paul O Hassa, Bernhard Lüscher, Herwig Schüler, Friedrich Koch-Nolte. Trends Biochem Sci 2010
558
12

Poly(ADP-ribosyl)ation by PARP1: reaction mechanism and regulatory proteins.
Elizaveta E Alemasova, Olga I Lavrik. Nucleic Acids Res 2019
90
12

PARP-2, A novel mammalian DNA damage-dependent poly(ADP-ribose) polymerase.
J C Amé, V Rolli, V Schreiber, C Niedergang, F Apiou, P Decker, S Muller, T Höger, J Ménissier-de Murcia, G de Murcia. J Biol Chem 1999
525
11

Laying a trap to kill cancer cells: PARP inhibitors and their mechanisms of action.
Yves Pommier, Mark J O'Connor, Johann de Bono. Sci Transl Med 2016
283
10

PARP-1 Activation Requires Local Unfolding of an Autoinhibitory Domain.
Jennine M Dawicki-McKenna, Marie-France Langelier, Jamie E DeNizio, Amanda A Riccio, Connie D Cao, Kelly R Karch, Michael McCauley, Jamin D Steffen, Ben E Black, John M Pascal. Mol Cell 2015
129
10

Serine ADP-ribosylation reversal by the hydrolase ARH3.
Pietro Fontana, Juan José Bonfiglio, Luca Palazzo, Edward Bartlett, Ivan Matic, Ivan Ahel. Elife 2017
106
10

Reversible mono-ADP-ribosylation of DNA breaks.
Deeksha Munnur, Ivan Ahel. FEBS J 2017
81
12

HPF1 completes the PARP active site for DNA damage-induced ADP-ribosylation.
Marcin J Suskiewicz, Florian Zobel, Tom E H Ogden, Pietro Fontana, Antonio Ariza, Ji-Chun Yang, Kang Zhu, Lily Bracken, William J Hawthorne, Dragana Ahel,[...]. Nature 2020
63
15

(ADP-ribosyl)hydrolases: structure, function, and biology.
Johannes Gregor Matthias Rack, Luca Palazzo, Ivan Ahel. Genes Dev 2020
39
25

Readers of poly(ADP-ribose): designed to be fit for purpose.
Federico Teloni, Matthias Altmeyer. Nucleic Acids Res 2016
113
10

Chemical genetic discovery of PARP targets reveals a role for PARP-1 in transcription elongation.
Bryan A Gibson, Yajie Zhang, Hong Jiang, Kristine M Hussey, Jonathan H Shrimp, Hening Lin, Frank Schwede, Yonghao Yu, W Lee Kraus. Science 2016
181
10

HPF1/C4orf27 Is a PARP-1-Interacting Protein that Regulates PARP-1 ADP-Ribosylation Activity.
Ian Gibbs-Seymour, Pietro Fontana, Johannes Gregor Matthias Rack, Ivan Ahel. Mol Cell 2016
114
10


Macrodomains: Structure, Function, Evolution, and Catalytic Activities.
Johannes Gregor Matthias Rack, Dragutin Perina, Ivan Ahel. Annu Rev Biochem 2016
110
9

Functional interaction between PARP-1 and PARP-2 in chromosome stability and embryonic development in mouse.
Josiane Ménissier de Murcia, Michelle Ricoul, Laurence Tartier, Claude Niedergang, Aline Huber, Françoise Dantzer, Valérie Schreiber, Jean-Christophe Amé, Andrée Dierich, Marianne LeMeur,[...]. EMBO J 2003
426
9

Site-specific characterization of the Asp- and Glu-ADP-ribosylated proteome.
Yajie Zhang, Jianqi Wang, Ming Ding, Yonghao Yu. Nat Methods 2013
193
9



Serine ADP-Ribosylation Depends on HPF1.
Juan José Bonfiglio, Pietro Fontana, Qi Zhang, Thomas Colby, Ian Gibbs-Seymour, Ilian Atanassov, Edward Bartlett, Roko Zaja, Ivan Ahel, Ivan Matic. Mol Cell 2017
136
9


ADP-Ribosylation, a Multifaceted Posttranslational Modification Involved in the Control of Cell Physiology in Health and Disease.
Bernhard Lüscher, Mareike Bütepage, Laura Eckei, Sarah Krieg, Patricia Verheugd, Brian H Shilton. Chem Rev 2018
87
10

Structural basis for allosteric PARP-1 retention on DNA breaks.
Levani Zandarashvili, Marie-France Langelier, Uday Kiran Velagapudi, Mark A Hancock, Jamin D Steffen, Ramya Billur, Zain M Hannan, Andrew J Wicks, Dragomir B Krastev, Stephen J Pettitt,[...]. Science 2020
58
15


Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation.
Sara C Larsen, Ivo A Hendriks, David Lyon, Lars J Jensen, Michael L Nielsen. Cell Rep 2018
53
15

The structure and catalytic mechanism of a poly(ADP-ribose) glycohydrolase.
Dea Slade, Mark S Dunstan, Eva Barkauskaite, Ria Weston, Pierre Lafite, Neil Dixon, Marijan Ahel, David Leys, Ivan Ahel. Nature 2011
219
8

Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease.
Reza Sharifi, Rosa Morra, C Denise Appel, Michael Tallis, Barry Chioza, Gytis Jankevicius, Michael A Simpson, Ivan Matic, Ege Ozkan, Barbara Golia,[...]. EMBO J 2013
190
8

Distribution of protein poly(ADP-ribosyl)ation systems across all domains of life.
Dragutin Perina, Andreja Mikoč, Josip Ahel, Helena Ćetković, Roko Žaja, Ivan Ahel. DNA Repair (Amst) 2014
85
9

Poly(ADP-ribose) polymerases covalently modify strand break termini in DNA fragments in vitro.
Ibtissam Talhaoui, Natalia A Lebedeva, Gabriella Zarkovic, Christine Saint-Pierre, Mikhail M Kutuzov, Maria V Sukhanova, Bakhyt T Matkarimov, Didier Gasparutto, Murat K Saparbaev, Olga I Lavrik,[...]. Nucleic Acids Res 2016
69
11

Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Silvija Bilokapic, Marcin J Suskiewicz, Ivan Ahel, Mario Halic. Nature 2020
22
36

Proteome-wide identification of the endogenous ADP-ribosylome of mammalian cells and tissue.
Rita Martello, Mario Leutert, Stephanie Jungmichel, Vera Bilan, Sara C Larsen, Clifford Young, Michael O Hottiger, Michael L Nielsen. Nat Commun 2016
104
8

Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation.
Sara C Buch-Larsen, Ivo A Hendriks, Jean M Lodge, Martin Rykær, Benjamin Furtwängler, Evgenia Shishkova, Michael S Westphall, Joshua J Coon, Michael L Nielsen. Cell Rep 2020
25
32

Interplay of Histone Marks with Serine ADP-Ribosylation.
Edward Bartlett, Juan José Bonfiglio, Evgeniia Prokhorova, Thomas Colby, Florian Zobel, Ivan Ahel, Ivan Matic. Cell Rep 2018
39
20

PARP inhibition: PARP1 and beyond.
Michèle Rouleau, Anand Patel, Michael J Hendzel, Scott H Kaufmann, Guy G Poirier. Nat Rev Cancer 2010
881
7

Isolation and characterization of the cDNA encoding bovine poly(ADP-ribose) glycohydrolase.
W Lin, J C Amé, N Aboul-Ela, E L Jacobson, M K Jacobson. J Biol Chem 1997
172
7

The diverse roles and clinical relevance of PARPs in DNA damage repair: current state of the art.
Mike De Vos, Valérie Schreiber, Françoise Dantzer. Biochem Pharmacol 2012
323
7

Poly(ADP-ribose) polymerase-2 (PARP-2) is required for efficient base excision DNA repair in association with PARP-1 and XRCC1.
Valérie Schreiber, Jean-Christophe Amé, Pascal Dollé, Inès Schultz, Bruno Rinaldi, Valérie Fraulob, Josiane Ménissier-de Murcia, Gilbert de Murcia. J Biol Chem 2002
504
7

Inhibition of poly(ADP-ribose) polymerase in tumors from BRCA mutation carriers.
Peter C Fong, David S Boss, Timothy A Yap, Andrew Tutt, Peijun Wu, Marja Mergui-Roelvink, Peter Mortimer, Helen Swaisland, Alan Lau, Mark J O'Connor,[...]. N Engl J Med 2009
7

Structural Basis of Detection and Signaling of DNA Single-Strand Breaks by Human PARP-1.
Sebastian Eustermann, Wing-Fung Wu, Marie-France Langelier, Ji-Chun Yang, Laura E Easton, Amanda A Riccio, John M Pascal, David Neuhaus. Mol Cell 2015
134
7

The role of poly ADP-ribosylation in the first wave of DNA damage response.
Chao Liu, Aditi Vyas, Muzaffer A Kassab, Anup K Singh, Xiaochun Yu. Nucleic Acids Res 2017
78
8

NAD+ analog reveals PARP-1 substrate-blocking mechanism and allosteric communication from catalytic center to DNA-binding domains.
Marie-France Langelier, Levani Zandarashvili, Pedro M Aguiar, Ben E Black, John M Pascal. Nat Commun 2018
76
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.