Sofia Francia, Flavia Michelini, Alka Saxena, Dave Tang, Michiel de Hoon, Viviana Anelli, Marina Mione, Piero Carninci, Fabrizio d'Adda di Fagagna. Nature 2012
Times Cited: 369
Times Cited: 369
Times Cited
Times Co-cited
Similarity
Damage-induced lncRNAs control the DNA damage response through interaction with DDRNAs at individual double-strand breaks.
Flavia Michelini, Sethuramasundaram Pitchiaya, Valerio Vitelli, Sheetal Sharma, Ubaldo Gioia, Fabio Pessina, Matteo Cabrini, Yejun Wang, Ilaria Capozzo, Fabio Iannelli,[...]. Nat Cell Biol 2017
Flavia Michelini, Sethuramasundaram Pitchiaya, Valerio Vitelli, Sheetal Sharma, Ubaldo Gioia, Fabio Pessina, Matteo Cabrini, Yejun Wang, Ilaria Capozzo, Fabio Iannelli,[...]. Nat Cell Biol 2017
62
A role for small RNAs in DNA double-strand break repair.
Wei Wei, Zhaoqing Ba, Min Gao, Yang Wu, Yanting Ma, Simon Amiard, Charles I White, Jannie Michaela Rendtlew Danielsen, Yun-Gui Yang, Yijun Qi. Cell 2012
Wei Wei, Zhaoqing Ba, Min Gao, Yang Wu, Yanting Ma, Simon Amiard, Charles I White, Jannie Michaela Rendtlew Danielsen, Yun-Gui Yang, Yijun Qi. Cell 2012
46
Drosha drives the formation of DNA:RNA hybrids around DNA break sites to facilitate DNA repair.
Wei-Ting Lu, Ben R Hawley, George L Skalka, Robert A Baldock, Ewan M Smith, Aldo S Bader, Michal Malewicz, Felicity Z Watts, Ania Wilczynska, Martin Bushell. Nat Commun 2018
Wei-Ting Lu, Ben R Hawley, George L Skalka, Robert A Baldock, Ewan M Smith, Aldo S Bader, Michal Malewicz, Felicity Z Watts, Ania Wilczynska, Martin Bushell. Nat Commun 2018
40
Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair.
Corina Ohle, Rafael Tesorero, Géza Schermann, Nikolay Dobrev, Irmgard Sinning, Tamás Fischer. Cell 2016
Corina Ohle, Rafael Tesorero, Géza Schermann, Nikolay Dobrev, Irmgard Sinning, Tamás Fischer. Cell 2016
39
BRCA2 controls DNA:RNA hybrid level at DSBs by mediating RNase H2 recruitment.
Giuseppina D'Alessandro, Donna Rose Whelan, Sean Michael Howard, Valerio Vitelli, Xavier Renaudin, Marek Adamowicz, Fabio Iannelli, Corey Winston Jones-Weinert, MiYoung Lee, Valentina Matti,[...]. Nat Commun 2018
Giuseppina D'Alessandro, Donna Rose Whelan, Sean Michael Howard, Valerio Vitelli, Xavier Renaudin, Marek Adamowicz, Fabio Iannelli, Corey Winston Jones-Weinert, MiYoung Lee, Valentina Matti,[...]. Nat Commun 2018
35
Senataxin resolves RNA:DNA hybrids forming at DNA double-strand breaks to prevent translocations.
Sarah Cohen, Nadine Puget, Yea-Lih Lin, Thomas Clouaire, Marion Aguirrebengoa, Vincent Rocher, Philippe Pasero, Yvan Canitrot, Gaëlle Legube. Nat Commun 2018
Sarah Cohen, Nadine Puget, Yea-Lih Lin, Thomas Clouaire, Marion Aguirrebengoa, Vincent Rocher, Philippe Pasero, Yvan Canitrot, Gaëlle Legube. Nat Commun 2018
32
Functional transcription promoters at DNA double-strand breaks mediate RNA-driven phase separation of damage-response factors.
Fabio Pessina, Fabio Giavazzi, Yandong Yin, Ubaldo Gioia, Valerio Vitelli, Alessandro Galbiati, Sara Barozzi, Massimiliano Garre, Amanda Oldani, Andrew Flaus,[...]. Nat Cell Biol 2019
Fabio Pessina, Fabio Giavazzi, Yandong Yin, Ubaldo Gioia, Valerio Vitelli, Alessandro Galbiati, Sara Barozzi, Massimiliano Garre, Amanda Oldani, Andrew Flaus,[...]. Nat Cell Biol 2019
32
DICER, DROSHA and DNA damage response RNAs are necessary for the secondary recruitment of DNA damage response factors.
Sofia Francia, Matteo Cabrini, Valentina Matti, Amanda Oldani, Fabrizio d'Adda di Fagagna. J Cell Sci 2016
Sofia Francia, Matteo Cabrini, Valentina Matti, Amanda Oldani, Fabrizio d'Adda di Fagagna. J Cell Sci 2016
32
ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks.
Niraj M Shanbhag, Ilona U Rafalska-Metcalf, Carlo Balane-Bolivar, Susan M Janicki, Roger A Greenberg. Cell 2010
Niraj M Shanbhag, Ilona U Rafalska-Metcalf, Carlo Balane-Bolivar, Susan M Janicki, Roger A Greenberg. Cell 2010
27
Human Rad52 Promotes XPG-Mediated R-loop Processing to Initiate Transcription-Associated Homologous Recombination Repair.
Takaaki Yasuhara, Reona Kato, Yoshihiko Hagiwara, Bunsyo Shiotani, Motohiro Yamauchi, Shinichiro Nakada, Atsushi Shibata, Kiyoshi Miyagawa. Cell 2018
Takaaki Yasuhara, Reona Kato, Yoshihiko Hagiwara, Bunsyo Shiotani, Motohiro Yamauchi, Shinichiro Nakada, Atsushi Shibata, Kiyoshi Miyagawa. Cell 2018
26
Ago2 facilitates Rad51 recruitment and DNA double-strand break repair by homologous recombination.
Min Gao, Wei Wei, Ming-Ming Li, Yong-Sheng Wu, Zhaoqing Ba, Kang-Xuan Jin, Miao-Miao Li, You-Qi Liao, Samir Adhikari, Zechen Chong,[...]. Cell Res 2014
Min Gao, Wei Wei, Ming-Ming Li, Yong-Sheng Wu, Zhaoqing Ba, Kang-Xuan Jin, Miao-Miao Li, You-Qi Liao, Samir Adhikari, Zechen Chong,[...]. Cell Res 2014
25
Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks.
François Aymard, Beatrix Bugler, Christine K Schmidt, Emmanuelle Guillou, Pierre Caron, Sébastien Briois, Jason S Iacovoni, Virginie Daburon, Kyle M Miller, Stephen P Jackson,[...]. Nat Struct Mol Biol 2014
François Aymard, Beatrix Bugler, Christine K Schmidt, Emmanuelle Guillou, Pierre Caron, Sébastien Briois, Jason S Iacovoni, Virginie Daburon, Kyle M Miller, Stephen P Jackson,[...]. Nat Struct Mol Biol 2014
25
Transcript-RNA-templated DNA recombination and repair.
Havva Keskin, Ying Shen, Fei Huang, Mikir Patel, Taehwan Yang, Katie Ashley, Alexander V Mazin, Francesca Storici. Nature 2014
Havva Keskin, Ying Shen, Fei Huang, Mikir Patel, Taehwan Yang, Katie Ashley, Alexander V Mazin, Francesca Storici. Nature 2014
24
Tyrosine kinase c-Abl couples RNA polymerase II transcription to DNA double-strand breaks.
Kaspar Burger, Margarita Schlackow, Monika Gullerova. Nucleic Acids Res 2019
Kaspar Burger, Margarita Schlackow, Monika Gullerova. Nucleic Acids Res 2019
46
Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks.
Franziska Bonath, Judit Domingo-Prim, Marcel Tarbier, Marc R Friedländer, Neus Visa. Nucleic Acids Res 2018
Franziska Bonath, Judit Domingo-Prim, Marcel Tarbier, Marc R Friedländer, Neus Visa. Nucleic Acids Res 2018
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R Loops: From Physiological to Pathological Roles.
Tatiana García-Muse, Andrés Aguilera. Cell 2019
Tatiana García-Muse, Andrés Aguilera. Cell 2019
19
A small RNA response at DNA ends in Drosophila.
Katharina M Michalik, Romy Böttcher, Klaus Förstemann. Nucleic Acids Res 2012
Katharina M Michalik, Romy Böttcher, Klaus Förstemann. Nucleic Acids Res 2012
18
RNA polymerase III is required for the repair of DNA double-strand breaks by homologous recombination.
Sijie Liu, Yu Hua, Jingna Wang, Lingyan Li, Junjie Yuan, Bo Zhang, Ziyang Wang, Jianguo Ji, Daochun Kong. Cell 2021
Sijie Liu, Yu Hua, Jingna Wang, Lingyan Li, Junjie Yuan, Bo Zhang, Ziyang Wang, Jianguo Ji, Daochun Kong. Cell 2021
36
Rad52 Inverse Strand Exchange Drives RNA-Templated DNA Double-Strand Break Repair.
Olga M Mazina, Havva Keskin, Kritika Hanamshet, Francesca Storici, Alexander V Mazin. Mol Cell 2017
Olga M Mazina, Havva Keskin, Kritika Hanamshet, Francesca Storici, Alexander V Mazin. Mol Cell 2017
20
The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
Stephen P Jackson, Jiri Bartek. Nature 2009
17
BRCA1 recruitment to transcriptional pause sites is required for R-loop-driven DNA damage repair.
Elodie Hatchi, Konstantina Skourti-Stathaki, Steffen Ventz, Luca Pinello, Angela Yen, Kinga Kamieniarz-Gdula, Stoil Dimitrov, Shailja Pathania, Kristine M McKinney, Matthew L Eaton,[...]. Mol Cell 2015
Elodie Hatchi, Konstantina Skourti-Stathaki, Steffen Ventz, Luca Pinello, Angela Yen, Kinga Kamieniarz-Gdula, Stoil Dimitrov, Shailja Pathania, Kristine M McKinney, Matthew L Eaton,[...]. Mol Cell 2015
17
DEAD Box 1 Facilitates Removal of RNA and Homologous Recombination at DNA Double-Strand Breaks.
Lei Li, Devon R Germain, Ho-Yin Poon, Matthew R Hildebrandt, Elizabeth A Monckton, Darin McDonald, Michael J Hendzel, Roseline Godbout. Mol Cell Biol 2016
Lei Li, Devon R Germain, Ho-Yin Poon, Matthew R Hildebrandt, Elizabeth A Monckton, Darin McDonald, Michael J Hendzel, Roseline Godbout. Mol Cell Biol 2016
19
The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
16
DNAPKcs-dependent arrest of RNA polymerase II transcription in the presence of DNA breaks.
Tibor Pankotai, Céline Bonhomme, David Chen, Evi Soutoglou. Nat Struct Mol Biol 2012
Tibor Pankotai, Céline Bonhomme, David Chen, Evi Soutoglou. Nat Struct Mol Biol 2012
16
Nuclear phosphorylated Dicer processes double-stranded RNA in response to DNA damage.
Kaspar Burger, Margarita Schlackow, Martin Potts, Svenja Hester, Shabaz Mohammed, Monika Gullerova. J Cell Biol 2017
Kaspar Burger, Margarita Schlackow, Martin Potts, Svenja Hester, Shabaz Mohammed, Monika Gullerova. J Cell Biol 2017
28
MRE11-RAD50-NBS1 Complex Is Sufficient to Promote Transcription by RNA Polymerase II at Double-Strand Breaks by Melting DNA Ends.
Sheetal Sharma, Roopesh Anand, Xuzhu Zhang, Sofia Francia, Flavia Michelini, Alessandro Galbiati, Hannah Williams, Daryl A Ronato, Jean-Yves Masson, Eli Rothenberg,[...]. Cell Rep 2021
Sheetal Sharma, Roopesh Anand, Xuzhu Zhang, Sofia Francia, Flavia Michelini, Alessandro Galbiati, Hannah Williams, Daryl A Ronato, Jean-Yves Masson, Eli Rothenberg,[...]. Cell Rep 2021
64
ATM, ATR, and DNA-PK: The Trinity at the Heart of the DNA Damage Response.
Andrew N Blackford, Stephen P Jackson. Mol Cell 2017
Andrew N Blackford, Stephen P Jackson. Mol Cell 2017
15
Classical non-homologous end-joining pathway utilizes nascent RNA for error-free double-strand break repair of transcribed genes.
Anirban Chakraborty, Nisha Tapryal, Tatiana Venkova, Nobuo Horikoshi, Raj K Pandita, Altaf H Sarker, Partha S Sarkar, Tej K Pandita, Tapas K Hazra. Nat Commun 2016
Anirban Chakraborty, Nisha Tapryal, Tatiana Venkova, Nobuo Horikoshi, Raj K Pandita, Altaf H Sarker, Partha S Sarkar, Tej K Pandita, Tapas K Hazra. Nat Commun 2016
15
EXOSC10 is required for RPA assembly and controlled DNA end resection at DNA double-strand breaks.
Judit Domingo-Prim, Martin Endara-Coll, Franziska Bonath, Sonia Jimeno, Rosario Prados-Carvajal, Marc R Friedländer, Pablo Huertas, Neus Visa. Nat Commun 2019
Judit Domingo-Prim, Martin Endara-Coll, Franziska Bonath, Sonia Jimeno, Rosario Prados-Carvajal, Marc R Friedländer, Pablo Huertas, Neus Visa. Nat Commun 2019
24
53BP1 exchanges slowly at the sites of DNA damage and appears to require RNA for its association with chromatin.
Fiona Pryde, Shirin Khalili, Kathryn Robertson, Jim Selfridge, Ann-Marie Ritchie, David W Melton, Denis Jullien, Yasuhisa Adachi. J Cell Sci 2005
Fiona Pryde, Shirin Khalili, Kathryn Robertson, Jim Selfridge, Ann-Marie Ritchie, David W Melton, Denis Jullien, Yasuhisa Adachi. J Cell Sci 2005
14
Small RNAs Recruit Chromatin-Modifying Enzymes MMSET and Tip60 to Reconfigure Damaged DNA upon Double-Strand Break and Facilitate Repair.
Qinhong Wang, Michael Goldstein. Cancer Res 2016
Qinhong Wang, Michael Goldstein. Cancer Res 2016
23
METTL3 and N6-Methyladenosine Promote Homologous Recombination-Mediated Repair of DSBs by Modulating DNA-RNA Hybrid Accumulation.
Canfeng Zhang, Liping Chen, Di Peng, Ao Jiang, Yunru He, Yanru Zeng, Chen Xie, Haoxian Zhou, Xiaotong Luo, Haiying Liu,[...]. Mol Cell 2020
Canfeng Zhang, Liping Chen, Di Peng, Ao Jiang, Yunru He, Yanru Zeng, Chen Xie, Haoxian Zhou, Xiaotong Luo, Haiying Liu,[...]. Mol Cell 2020
14
RNF168 ubiquitinates K13-15 on H2A/H2AX to drive DNA damage signaling.
Francesca Mattiroli, Joseph H A Vissers, Willem J van Dijk, Pauline Ikpa, Elisabetta Citterio, Wim Vermeulen, Jurgen A Marteijn, Titia K Sixma. Cell 2012
Francesca Mattiroli, Joseph H A Vissers, Willem J van Dijk, Pauline Ikpa, Elisabetta Citterio, Wim Vermeulen, Jurgen A Marteijn, Titia K Sixma. Cell 2012
13
BRCA2 prevents R-loop accumulation and associates with TREX-2 mRNA export factor PCID2.
Vaibhav Bhatia, Sonia I Barroso, María L García-Rubio, Emanuela Tumini, Emilia Herrera-Moyano, Andrés Aguilera. Nature 2014
Vaibhav Bhatia, Sonia I Barroso, María L García-Rubio, Emanuela Tumini, Emilia Herrera-Moyano, Andrés Aguilera. Nature 2014
13
RNA-templated DNA repair.
Francesca Storici, Katarzyna Bebenek, Thomas A Kunkel, Dmitry A Gordenin, Michael A Resnick. Nature 2007
Francesca Storici, Katarzyna Bebenek, Thomas A Kunkel, Dmitry A Gordenin, Michael A Resnick. Nature 2007
12
Single-molecule imaging of transcription at damaged chromatin.
Alexandra C Vítor, Sreerama C Sridhara, João C Sabino, Ana I Afonso, Ana R Grosso, Robert M Martin, Sérgio F de Almeida. Sci Adv 2019
Alexandra C Vítor, Sreerama C Sridhara, João C Sabino, Ana I Afonso, Ana R Grosso, Robert M Martin, Sérgio F de Almeida. Sci Adv 2019
37
Human senataxin resolves RNA/DNA hybrids formed at transcriptional pause sites to promote Xrn2-dependent termination.
Konstantina Skourti-Stathaki, Nicholas J Proudfoot, Natalia Gromak. Mol Cell 2011
Konstantina Skourti-Stathaki, Nicholas J Proudfoot, Natalia Gromak. Mol Cell 2011
12
DNA:RNA hybrids form at DNA double-strand breaks in transcriptionally active loci.
Aldo S Bader, Martin Bushell. Cell Death Dis 2020
Aldo S Bader, Martin Bushell. Cell Death Dis 2020
63
ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
Shuhei Matsuoka, Bryan A Ballif, Agata Smogorzewska, E Robert McDonald, Kristen E Hurov, Ji Luo, Corey E Bakalarski, Zhenming Zhao, Nicole Solimini, Yaniv Lerenthal,[...]. Science 2007
Shuhei Matsuoka, Bryan A Ballif, Agata Smogorzewska, E Robert McDonald, Kristen E Hurov, Ji Luo, Corey E Bakalarski, Zhenming Zhao, Nicole Solimini, Yaniv Lerenthal,[...]. Science 2007
11
RNA/DNA Hybrid Interactome Identifies DXH9 as a Molecular Player in Transcriptional Termination and R-Loop-Associated DNA Damage.
Agnese Cristini, Matthias Groh, Maiken S Kristiansen, Natalia Gromak. Cell Rep 2018
Agnese Cristini, Matthias Groh, Maiken S Kristiansen, Natalia Gromak. Cell Rep 2018
11
A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks.
Fabio Iannelli, Alessandro Galbiati, Ilaria Capozzo, Quan Nguyen, Brian Magnuson, Flavia Michelini, Giuseppina D'Alessandro, Matteo Cabrini, Marco Roncador, Sofia Francia,[...]. Nat Commun 2017
Fabio Iannelli, Alessandro Galbiati, Ilaria Capozzo, Quan Nguyen, Brian Magnuson, Flavia Michelini, Giuseppina D'Alessandro, Matteo Cabrini, Marco Roncador, Sofia Francia,[...]. Nat Commun 2017
17
Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination.
Pablo Huertas, Andrés Aguilera. Mol Cell 2003
Pablo Huertas, Andrés Aguilera. Mol Cell 2003
11
The roles of RNA in DNA double-strand break repair.
Aldo S Bader, Ben R Hawley, Ania Wilczynska, Martin Bushell. Br J Cancer 2020
Aldo S Bader, Ben R Hawley, Ania Wilczynska, Martin Bushell. Br J Cancer 2020
23
Phase separation of 53BP1 determines liquid-like behavior of DNA repair compartments.
Sinan Kilic, Aleksandra Lezaja, Marco Gatti, Eliana Bianco, Jone Michelena, Ralph Imhof, Matthias Altmeyer. EMBO J 2019
Sinan Kilic, Aleksandra Lezaja, Marco Gatti, Eliana Bianco, Jone Michelena, Ralph Imhof, Matthias Altmeyer. EMBO J 2019
11
DNA damage during the G0/G1 phase triggers RNA-templated, Cockayne syndrome B-dependent homologous recombination.
Leizhen Wei, Satoshi Nakajima, Stefanie Böhm, Kara A Bernstein, Zhiyuan Shen, Michael Tsang, Arthur S Levine, Li Lan. Proc Natl Acad Sci U S A 2015
Leizhen Wei, Satoshi Nakajima, Stefanie Böhm, Kara A Bernstein, Zhiyuan Shen, Michael Tsang, Arthur S Levine, Li Lan. Proc Natl Acad Sci U S A 2015
11
DNA damage triggers SAF-A and RNA biogenesis factors exclusion from chromatin coupled to R-loops removal.
Sébastien Britton, Emma Dernoncourt, Christine Delteil, Carine Froment, Odile Schiltz, Bernard Salles, Philippe Frit, Patrick Calsou. Nucleic Acids Res 2014
Sébastien Britton, Emma Dernoncourt, Christine Delteil, Carine Froment, Odile Schiltz, Bernard Salles, Philippe Frit, Patrick Calsou. Nucleic Acids Res 2014
10
Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures.
Thomas Clouaire, Vincent Rocher, Anahita Lashgari, Coline Arnould, Marion Aguirrebengoa, Anna Biernacka, Magdalena Skrzypczak, François Aymard, Bernard Fongang, Norbert Dojer,[...]. Mol Cell 2018
Thomas Clouaire, Vincent Rocher, Anahita Lashgari, Coline Arnould, Marion Aguirrebengoa, Anna Biernacka, Magdalena Skrzypczak, François Aymard, Bernard Fongang, Norbert Dojer,[...]. Mol Cell 2018
10
DNA double-strand break repair-pathway choice in somatic mammalian cells.
Ralph Scully, Arvind Panday, Rajula Elango, Nicholas A Willis. Nat Rev Mol Cell Biol 2019
Ralph Scully, Arvind Panday, Rajula Elango, Nicholas A Willis. Nat Rev Mol Cell Biol 2019
10
Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals.
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
10
R-Loops as Cellular Regulators and Genomic Threats.
Madzia P Crossley, Michael Bocek, Karlene A Cimprich. Mol Cell 2019
Madzia P Crossley, Michael Bocek, Karlene A Cimprich. Mol Cell 2019
10
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.