A citation-based method for searching scientific literature

Amy M Furda, Adele M Marrangoni, Anna Lokshin, Bennett Van Houten. DNA Repair (Amst) 2012
Times Cited: 59







List of co-cited articles
651 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Oxidative stress induces degradation of mitochondrial DNA.
Inna Shokolenko, Natalia Venediktova, Alexandra Bochkareva, Glenn L Wilson, Mikhail F Alexeyev. Nucleic Acids Res 2009
283
30

Apoptosis induced by persistent single-strand breaks in mitochondrial genome: critical role of EXOG (5'-EXO/endonuclease) in their repair.
Anne W Tann, Istvan Boldogh, Gregor Meiss, Wei Qian, Bennett Van Houten, Sankar Mitra, Bartosz Szczesny. J Biol Chem 2011
102
27

Minimizing the damage: repair pathways keep mitochondrial DNA intact.
Lawrence Kazak, Aurelio Reyes, Ian J Holt. Nat Rev Mol Cell Biol 2012
207
25

The maintenance of mitochondrial DNA integrity--critical analysis and update.
Mikhail Alexeyev, Inna Shokolenko, Glenn Wilson, Susan LeDoux. Cold Spring Harb Perspect Biol 2013
239
23

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
18

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
290
18

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
18

Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repair.
Deniz Simsek, Amy Furda, Yankun Gao, Jérôme Artus, Erika Brunet, Anna-Katerina Hadjantonakis, Bennett Van Houten, Stewart Shuman, Peter J McKinnon, Maria Jasin. Nature 2011
149
15

DNA repair in mammalian mitochondria: Much more than we thought?
Pingfang Liu, Bruce Demple. Environ Mol Mutagen 2010
117
15

Persistent damage induces mitochondrial DNA degradation.
Inna N Shokolenko, Glenn L Wilson, Mikhail F Alexeyev. DNA Repair (Amst) 2013
34
26

Normal oxidative damage to mitochondrial and nuclear DNA is extensive.
C Richter, J W Park, B N Ames. Proc Natl Acad Sci U S A 1988
13

Mitochondrial DNA mutations in human disease.
Robert W Taylor, Doug M Turnbull. Nat Rev Genet 2005
13

Human DNA2 is a mitochondrial nuclease/helicase for efficient processing of DNA replication and repair intermediates.
Li Zheng, Mian Zhou, Zhigang Guo, Huiming Lu, Limin Qian, Huifang Dai, Junzhuan Qiu, Elena Yakubovskaya, Daniel F Bogenhagen, Bruce Demple,[...]. Mol Cell 2008
160
13

Mitochondria and cancer.
Douglas C Wallace. Nat Rev Cancer 2012
13

Mitochondrial point mutations do not limit the natural lifespan of mice.
Marc Vermulst, Jason H Bielas, Gregory C Kujoth, Warren C Ladiges, Peter S Rabinovitch, Tomas A Prolla, Lawrence A Loeb. Nat Genet 2007
272
13

Mitochondrial DNA mutations, oxidative stress, and apoptosis in mammalian aging.
G C Kujoth, A Hiona, T D Pugh, S Someya, K Panzer, S E Wohlgemuth, T Hofer, A Y Seo, R Sullivan, W A Jobling,[...]. Science 2005
13


Mitochondrial DNA nucleoid structure.
Daniel F Bogenhagen. Biochim Biophys Acta 2012
155
11

Identification and characterization of mitochondrial abasic (AP)-endonuclease in mammalian cells.
Ranajoy Chattopadhyay, Lee Wiederhold, Bartosz Szczesny, Istvan Boldogh, Tapas K Hazra, Tadahide Izumi, Sankar Mitra. Nucleic Acids Res 2006
113
11

Removal of oxidative DNA damage via FEN1-dependent long-patch base excision repair in human cell mitochondria.
Pingfang Liu, Limin Qian, Jung-Suk Sung, Nadja C de Souza-Pinto, Li Zheng, Daniel F Bogenhagen, Vilhelm A Bohr, David M Wilson, Binghui Shen, Bruce Demple. Mol Cell Biol 2008
149
11


The absence of a pyrimidine dimer repair mechanism in mammalian mitochondria.
D A Clayton, J N Doda, E C Friedberg. Proc Natl Acad Sci U S A 1974
421
11

Single-strand break repair and genetic disease.
Keith W Caldecott. Nat Rev Genet 2008
577
11


The biologic clock: the mitochondria?
D Harman. J Am Geriatr Soc 1972
11

Mitochondrial DNA ligase is dispensable for the viability of cultured cells but essential for mtDNA maintenance.
Inna N Shokolenko, Rafik Z Fayzulin, Sachin Katyal, Peter J McKinnon, Glenn L Wilson, Mikhail F Alexeyev. J Biol Chem 2013
22
31

Mitochondrial dynamics and autophagy aid in removal of persistent mitochondrial DNA damage in Caenorhabditis elegans.
Amanda S Bess, Tracey L Crocker, Ian T Ryde, Joel N Meyer. Nucleic Acids Res 2012
71
10

Quantitative PCR-based measurement of nuclear and mitochondrial DNA damage and repair in mammalian cells.
Janine H Santos, Joel N Meyer, Bhaskar S Mandavilli, Bennett Van Houten. Methods Mol Biol 2006
218
10

Mitochondrial transcription factor A regulates mtDNA copy number in mammals.
Mats I Ekstrand, Maria Falkenberg, Anja Rantanen, Chan Bae Park, Martina Gaspari, Kjell Hultenby, Pierre Rustin, Claes M Gustafsson, Nils-Göran Larsson. Hum Mol Genet 2004
562
10



Human mitochondrial DNA is packaged with TFAM.
Tanfis Istiaq Alam, Tomotake Kanki, Tsuyoshi Muta, Koutarou Ukaji, Yoshito Abe, Hiroshi Nakayama, Koji Takio, Naotaka Hamasaki, Dongchon Kang. Nucleic Acids Res 2003
244
10

Generation of rho0 cells utilizing a mitochondrially targeted restriction endonuclease and comparative analyses.
Alexandra Kukat, Christian Kukat, Jan Brocher, Ingo Schäfer, Georg Krohne, Ian A Trounce, Gaetano Villani, Peter Seibel. Nucleic Acids Res 2008
67
10

Long patch base excision repair in mammalian mitochondrial genomes.
Bartosz Szczesny, Anne W Tann, Matthew J Longley, William C Copeland, Sankar Mitra. J Biol Chem 2008
107
10

Number matters: control of mammalian mitochondrial DNA copy number.
Laura L Clay Montier, Janice J Deng, Yidong Bai. J Genet Genomics 2009
305
10


Analysis of gene-specific DNA damage and repair using quantitative polymerase chain reaction.
S Ayala-Torres, Y Chen, T Svoboda, J Rosenblatt, B Van Houten. Methods 2000
174
10

Cell sorting experiments link persistent mitochondrial DNA damage with loss of mitochondrial membrane potential and apoptotic cell death.
Janine Hertzog Santos, L'uba Hunakova, Yiming Chen, Carl Bortner, Bennett Van Houten. J Biol Chem 2003
145
10

Mitochondrial DNA damage induced autophagy, cell death, and disease.
Bennett Van Houten, Senyene E Hunter, Joel N Meyer. Front Biosci (Landmark Ed) 2016
76
10

The QPCR assay for analysis of mitochondrial DNA damage, repair, and relative copy number.
Senyene E Hunter, Dawoon Jung, Richard T Di Giulio, Joel N Meyer. Methods 2010
96
8

Human mitochondrial DNA polymerase γ exhibits potential for bypass and mutagenesis at UV-induced cyclobutane thymine dimers.
Rajesh Kasiviswanathan, Margaret A Gustafson, William C Copeland, Joel N Meyer. J Biol Chem 2012
29
17

Role of mitochondrial DNA in toxic responses to oxidative stress.
Bennett Van Houten, Victoria Woshner, Janine H Santos. DNA Repair (Amst) 2006
270
8

Mitochondrial dysfunction in neurodegenerative diseases and cancer.
Michelle Barbi de Moura, Lucas Santana dos Santos, Bennett Van Houten. Environ Mol Mutagen 2010
145
8


Defects in mitochondrial DNA replication and human disease.
William C Copeland. Crit Rev Biochem Mol Biol 2012
113
8

Mitochondrial DNA repair in aging and disease.
Nadiya M Druzhyna, Glenn L Wilson, Susan P LeDoux. Mech Ageing Dev 2008
105
8

Mitochondrial DNA repair and association with aging--an update.
Ricardo Gredilla, Vilhelm A Bohr, Tinna Stevnsner. Exp Gerontol 2010
99
8


DNA2 resolves expanding flap in mitochondrial base excision repair.
William C Copeland, Matthew J Longley. Mol Cell 2008
39
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.