A citation-based method for searching scientific literature

Nadine Roth, Jacqueline Klimesch, Stefanie Dukowic-Schulze, Michael Pacher, Anja Mannuss, Holger Puchta. Plant J 2012
Times Cited: 45







List of co-cited articles
654 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.
Anja Mannuss, Stefanie Dukowic-Schulze, Stefanie Suer, Frank Hartung, Michael Pacher, Holger Puchta. Plant Cell 2010
73
33

In planta gene targeting.
Friedrich Fauser, Nadine Roth, Michael Pacher, Gabriele Ilg, Rocío Sánchez-Fernández, Christian Biesgen, Holger Puchta. Proc Natl Acad Sci U S A 2012
127
33


Precise genome modification in the crop species Zea mays using zinc-finger nucleases.
Vipula K Shukla, Yannick Doyon, Jeffrey C Miller, Russell C DeKelver, Erica A Moehle, Sarah E Worden, Jon C Mitchell, Nicole L Arnold, Sunita Gopalan, Xiangdong Meng,[...]. Nature 2009
434
28

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
28



Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis.
Cyril Charbonnel, Elisabeth Allain, Maria Eugenia Gallego, Charles I White. DNA Repair (Amst) 2011
71
24


Regulation of homologous recombination in eukaryotes.
Wolf-Dietrich Heyer, Kirk T Ehmsen, Jie Liu. Annu Rev Genet 2010
683
22

High-frequency modification of plant genes using engineered zinc-finger nucleases.
Jeffrey A Townsend, David A Wright, Ronnie J Winfrey, Fengli Fu, Morgan L Maeder, J Keith Joung, Daniel F Voytas. Nature 2009
365
22

Differing requirements for the Arabidopsis Rad51 paralogs in meiosis and DNA repair.
Jean-Yves Bleuyard, Maria E Gallego, Florence Savigny, Charles I White. Plant J 2005
109
22

The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis.
Wuxing Li, Changbin Chen, Ullrich Markmann-Mulisch, Ljudmilla Timofejeva, Elmon Schmelzer, Hong Ma, Bernd Reiss. Proc Natl Acad Sci U S A 2004
198
22

Effects of XRCC2 and RAD51B mutations on somatic and meiotic recombination in Arabidopsis thaliana.
Olivier Da Ines, Fabienne Degroote, Simon Amiard, Chantal Goubely, Maria E Gallego, Charles I White. Plant J 2013
32
31

Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9.
Jian-Feng Li, Julie E Norville, John Aach, Matthew McCormack, Dandan Zhang, Jenifer Bush, George M Church, Jen Sheen. Nat Biotechnol 2013
753
22

Targeted genome modification of crop plants using a CRISPR-Cas system.
Qiwei Shan, Yanpeng Wang, Jun Li, Yi Zhang, Kunling Chen, Zhen Liang, Kang Zhang, Jinxing Liu, Jianzhong Jeff Xi, Jin-Long Qiu,[...]. Nat Biotechnol 2013
929
22

The Fanconi anemia ortholog FANCM ensures ordered homologous recombination in both somatic and meiotic cells in Arabidopsis.
Alexander Knoll, James D Higgins, Katharina Seeliger, Sarah J Reha, Natalie J Dangel, Markus Bauknecht, Susan Schröpfer, F Christopher H Franklin, Holger Puchta. Plant Cell 2012
72
20


Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.
Tomas Cermak, Erin L Doyle, Michelle Christian, Li Wang, Yong Zhang, Clarice Schmidt, Joshua A Baller, Nikunj V Somia, Adam J Bogdanove, Daniel F Voytas. Nucleic Acids Res 2011
20

The Arabidopsis homologue of Xrcc3 plays an essential role in meiosis.
Jean-Yves Bleuyard, Charles I White. EMBO J 2004
103
20

Repairing breaks in the plant genome: the importance of keeping it together.
Wanda M Waterworth, Georgina E Drury, Clifford M Bray, Christopher E West. New Phytol 2011
106
20

Site-directed mutagenesis in Arabidopsis using custom-designed zinc finger nucleases.
Keishi Osakabe, Yuriko Osakabe, Seiichi Toki. Proc Natl Acad Sci U S A 2010
140
20

Plant genome engineering with sequence-specific nucleases.
Daniel F Voytas. Annu Rev Plant Biol 2013
242
20

Increased frequency of homologous recombination and T-DNA integration in Arabidopsis CAF-1 mutants.
Masaki Endo, Yuichi Ishikawa, Keishi Osakabe, Shigeki Nakayama, Hidetaka Kaya, Takashi Araki, Kei-ichi Shibahara, Kiyomi Abe, Hiroaki Ichikawa, Lisa Valentine,[...]. EMBO J 2006
127
17


Arabidopsis RAD51C gene is important for homologous recombination in meiosis and mitosis.
Kiyomi Abe, Keishi Osakabe, Shigeki Nakayama, Masaki Endo, Akemi Tagiri, Setsuko Todoriki, Hiroaki Ichikawa, Seiichi Toki. Plant Physiol 2005
71
17

Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants.
Cyril Charbonnel, Maria E Gallego, Charles I White. Plant J 2010
63
17

Recent advances in understanding of the DNA double-strand break repair machinery of plants.
Jean-Yves Bleuyard, Maria E Gallego, Charles I White. DNA Repair (Amst) 2006
77
17

Targeted mutagenesis using zinc-finger nucleases in Arabidopsis.
Alan Lloyd, Christopher L Plaisier, Dana Carroll, Gary N Drews. Proc Natl Acad Sci U S A 2005
218
17

High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases.
Feng Zhang, Morgan L Maeder, Erica Unger-Wallace, Justin P Hoshaw, Deepak Reyon, Michelle Christian, Xiaohong Li, Christopher J Pierick, Drena Dobbs, Thomas Peterson,[...]. Proc Natl Acad Sci U S A 2010
197
17

Transcription activator-like effector nucleases enable efficient plant genome engineering.
Yong Zhang, Feng Zhang, Xiaohong Li, Joshua A Baller, Yiping Qi, Colby G Starker, Adam J Bogdanove, Daniel F Voytas. Plant Physiol 2013
241
17

High-efficiency TALEN-based gene editing produces disease-resistant rice.
Ting Li, Bo Liu, Martin H Spalding, Donald P Weeks, Bing Yang. Nat Biotechnol 2012
530
17

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
17

Roles of XRCC2, RAD51B and RAD51D in RAD51-independent SSA recombination.
Heïdi Serra, Olivier Da Ines, Fabienne Degroote, Maria E Gallego, Charles I White. PLoS Genet 2013
42
19

DNA replicons for plant genome engineering.
Nicholas J Baltes, Javier Gil-Humanes, Tomas Cermak, Paul A Atkins, Daniel F Voytas. Plant Cell 2014
263
17


Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice.
Ayako Nishizawa-Yokoi, Satoko Nonaka, Hiroaki Saika, Yong-Ik Kwon, Keishi Osakabe, Seiichi Toki. New Phytol 2012
39
17

Arabidopsis Rad51B is important for double-strand DNA breaks repair in somatic cells.
Keishi Osakabe, Kiyomi Abe, Hiroaki Yamanouchi, Toshio Takyuu, Terutaka Yoshioka, Yuji Ito, Tomohiko Kato, Satoshi Tabata, Shunsuke Kurei, Yasushi Yoshioka,[...]. Plant Mol Biol 2005
46
15

Pathways to meiotic recombination in Arabidopsis thaliana.
Kim Osman, James D Higgins, Eugenio Sanchez-Moran, Susan J Armstrong, F Chris H Franklin. New Phytol 2011
136
15

RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
15

Breaking the code of DNA binding specificity of TAL-type III effectors.
Jens Boch, Heidi Scholze, Sebastian Schornack, Angelika Landgraf, Simone Hahn, Sabine Kay, Thomas Lahaye, Anja Nickstadt, Ulla Bonas. Science 2009
15

Localized egg-cell expression of effector proteins for targeted modification of the Arabidopsis genome.
Liron Even-Faitelson, Aviva Samach, Cathy Melamed-Bessudo, Naomi Avivi-Ragolsky, Avraham A Levy. Plant J 2011
44
15

Efficient genome editing in plants using a CRISPR/Cas system.
Zhengyan Feng, Botao Zhang, Wona Ding, Xiaodong Liu, Dong-Lei Yang, Pengliang Wei, Fengqiu Cao, Shihua Zhu, Feng Zhang, Yanfei Mao,[...]. Cell Res 2013
514
15


High-frequency homologous recombination in plants mediated by zinc-finger nucleases.
David A Wright, Jeffrey A Townsend, Ronnie Joe Winfrey, Phillip A Irwin, Jyothi Rajagopal, Patricia M Lonosky, Bradford D Hall, Michael D Jondle, Daniel F Voytas. Plant J 2005
186
15

Increasing frequencies of site-specific mutagenesis and gene targeting in Arabidopsis by manipulating DNA repair pathways.
Yiping Qi, Yong Zhang, Feng Zhang, Joshua A Baller, Spencer C Cleland, Yungil Ryu, Colby G Starker, Daniel F Voytas. Genome Res 2013
104
15

Poly(ADP-ribose)polymerases are involved in microhomology mediated back-up non-homologous end joining in Arabidopsis thaliana.
Qi Jia, Amke den Dulk-Ras, Hexi Shen, Paul J J Hooykaas, Sylvia de Pater. Plant Mol Biol 2013
53
15

Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease.
Vladimir Nekrasov, Brian Staskawicz, Detlef Weigel, Jonathan D G Jones, Sophien Kamoun. Nat Biotechnol 2013
553
15



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.