A citation-based method for searching scientific literature

Thorkell Gudjonsson, Matthias Altmeyer, Velibor Savic, Luis Toledo, Christoffel Dinant, Merete Grøfte, Jirina Bartkova, Maria Poulsen, Yasuyoshi Oka, Simon Bekker-Jensen, Niels Mailand, Beate Neumann, Jean-Karim Heriche, Robert Shearer, Darren Saunders, Jiri Bartek, Jiri Lukas, Claudia Lukas. Cell 2012
Times Cited: 207







List of co-cited articles
965 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


RNF168 ubiquitinates K13-15 on H2A/H2AX to drive DNA damage signaling.
Francesca Mattiroli, Joseph H A Vissers, Willem J van Dijk, Pauline Ikpa, Elisabetta Citterio, Wim Vermeulen, Jurgen A Marteijn, Titia K Sixma. Cell 2012
377
30

RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins.
Carsten Doil, Niels Mailand, Simon Bekker-Jensen, Patrice Menard, Dorthe Helena Larsen, Rainer Pepperkok, Jan Ellenberg, Stephanie Panier, Daniel Durocher, Jiri Bartek,[...]. Cell 2009
631
27

The RIDDLE syndrome protein mediates a ubiquitin-dependent signaling cascade at sites of DNA damage.
Grant S Stewart, Stephanie Panier, Kelly Townsend, Abdallah K Al-Hakim, Nadine K Kolas, Edward S Miller, Shinichiro Nakada, Jarkko Ylanko, Signe Olivarius, Megan Mendez,[...]. Cell 2009
527
26

Histone H1 couples initiation and amplification of ubiquitin signalling after DNA damage.
Tina Thorslund, Anita Ripplinger, Saskia Hoffmann, Thomas Wild, Michael Uckelmann, Bine Villumsen, Takeo Narita, Titia K Sixma, Chunaram Choudhary, Simon Bekker-Jensen,[...]. Nature 2015
207
23

The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
21

53BP1 is a reader of the DNA-damage-induced H2A Lys 15 ubiquitin mark.
Amélie Fradet-Turcotte, Marella D Canny, Cristina Escribano-Díaz, Alexandre Orthwein, Charles C Y Leung, Hao Huang, Marie-Claude Landry, Julianne Kitevski-LeBlanc, Sylvie M Noordermeer, Frank Sicheri,[...]. Nature 2013
389
21

Orchestration of the DNA-damage response by the RNF8 ubiquitin ligase.
Nadine K Kolas, J Ross Chapman, Shinichiro Nakada, Jarkko Ylanko, Richard Chahwan, Frédéric D Sweeney, Stephanie Panier, Megan Mendez, Jan Wildenhain, Timothy M Thomson,[...]. Science 2007
654
17

RNF8 transduces the DNA-damage signal via histone ubiquitylation and checkpoint protein assembly.
Michael S Y Huen, Robert Grant, Isaac Manke, Kay Minn, Xiaochun Yu, Michael B Yaffe, Junjie Chen. Cell 2007
758
17

RNF8 ubiquitylates histones at DNA double-strand breaks and promotes assembly of repair proteins.
Niels Mailand, Simon Bekker-Jensen, Helene Faustrup, Fredrik Melander, Jiri Bartek, Claudia Lukas, Jiri Lukas. Cell 2007
829
17

The ubiquitin code.
David Komander, Michael Rape. Annu Rev Biochem 2012
16

53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks.
Samuel F Bunting, Elsa Callén, Nancy Wong, Hua-Tang Chen, Federica Polato, Amanda Gunn, Anne Bothmer, Niklas Feldhahn, Oscar Fernandez-Capetillo, Liu Cao,[...]. Cell 2010
997
15

A cell cycle-dependent regulatory circuit composed of 53BP1-RIF1 and BRCA1-CtIP controls DNA repair pathway choice.
Cristina Escribano-Díaz, Alexandre Orthwein, Amélie Fradet-Turcotte, Mengtan Xing, Jordan T F Young, Ján Tkáč, Michael A Cook, Adam P Rosebrock, Meagan Munro, Marella D Canny,[...]. Mol Cell 2013
518
14

ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks.
Niraj M Shanbhag, Ilona U Rafalska-Metcalf, Carlo Balane-Bolivar, Susan M Janicki, Roger A Greenberg. Cell 2010
450
13

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
13

A mechanism for the suppression of homologous recombination in G1 cells.
Alexandre Orthwein, Sylvie M Noordermeer, Marcus D Wilson, Sébastien Landry, Radoslav I Enchev, Alana Sherker, Meagan Munro, Jordan Pinder, Jayme Salsman, Graham Dellaire,[...]. Nature 2015
267
13

Functional Roles of the E3 Ubiquitin Ligase UBR5 in Cancer.
Robert F Shearer, Mary Iconomou, Colin K W Watts, Darren N Saunders. Mol Cancer Res 2015
56
23


RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites.
Bijan Sobhian, Genze Shao, Dana R Lilli, Aedín C Culhane, Lisa A Moreau, Bing Xia, David M Livingston, Roger A Greenberg. Science 2007
508
11


53BP1 nuclear bodies form around DNA lesions generated by mitotic transmission of chromosomes under replication stress.
Claudia Lukas, Velibor Savic, Simon Bekker-Jensen, Carsten Doil, Beate Neumann, Ronni Sølvhøj Pedersen, Merete Grøfte, Kok Lung Chan, Ian David Hickson, Jiri Bartek,[...]. Nat Cell Biol 2011
438
10


Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair.
Maria Victoria Botuyan, Joseph Lee, Irene M Ward, Ja-Eun Kim, James R Thompson, Junjie Chen, Georges Mer. Cell 2006
676
10

Double-strand break repair: 53BP1 comes into focus.
Stephanie Panier, Simon J Boulton. Nat Rev Mol Cell Biol 2014
553
10

RIF1 is essential for 53BP1-dependent nonhomologous end joining and suppression of DNA double-strand break resection.
J Ross Chapman, Patricia Barral, Jean-Baptiste Vannier, Valérie Borel, Martin Steger, Antonia Tomas-Loba, Alessandro A Sartori, Ian R Adams, Facundo D Batista, Simon J Boulton. Mol Cell 2013
374
10

Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination.
Jiangbo Tang, Nam Woo Cho, Gaofeng Cui, Erica M Manion, Niraj M Shanbhag, Maria Victoria Botuyan, Georges Mer, Roger A Greenberg. Nat Struct Mol Biol 2013
297
10

RNF168 promotes noncanonical K27 ubiquitination to signal DNA damage.
Marco Gatti, Sabrina Pinato, Alessio Maiolica, Francesca Rocchio, Maria Giulia Prato, Ruedi Aebersold, Lorenza Penengo. Cell Rep 2015
99
10

MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks.
Manuel Stucki, Julie A Clapperton, Duaa Mohammad, Michael B Yaffe, Stephen J Smerdon, Stephen P Jackson. Cell 2005
723
10

The E3 ubiquitin ligase UBR5 is recurrently mutated in mantle cell lymphoma.
Barbara Meissner, Robert Kridel, Raymond S Lim, Sanja Rogic, Kane Tse, David W Scott, Richard Moore, Andy J Mungall, Marco A Marra, Joseph M Connors,[...]. Blood 2013
92
9

ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
Shuhei Matsuoka, Bryan A Ballif, Agata Smogorzewska, E Robert McDonald, Kristen E Hurov, Ji Luo, Corey E Bakalarski, Zhenming Zhao, Nicole Solimini, Yaniv Lerenthal,[...]. Science 2007
9

RNF8- and RNF168-dependent degradation of KDM4A/JMJD2A triggers 53BP1 recruitment to DNA damage sites.
Frédérick A Mallette, Francesca Mattiroli, Gaofeng Cui, Leah C Young, Michael J Hendzel, Georges Mer, Titia K Sixma, Stéphane Richard. EMBO J 2012
227
9

53BP1 mediates productive and mutagenic DNA repair through distinct phosphoprotein interactions.
Elsa Callen, Michela Di Virgilio, Michael J Kruhlak, Maria Nieto-Soler, Nancy Wong, Hua-Tang Chen, Robert B Faryabi, Federica Polato, Margarida Santos, Linda M Starnes,[...]. Cell 2013
219
9

53BP1 regulates DSB repair using Rif1 to control 5' end resection.
Michal Zimmermann, Francisca Lottersberger, Sara B Buonomo, Agnel Sfeir, Titia de Lange. Science 2013
375
9

53BP1 loss rescues BRCA1 deficiency and is associated with triple-negative and BRCA-mutated breast cancers.
Peter Bouwman, Amal Aly, Jose M Escandell, Mark Pieterse, Jirina Bartkova, Hanneke van der Gulden, Sanne Hiddingh, Maria Thanasoula, Atul Kulkarni, Qifeng Yang,[...]. Nat Struct Mol Biol 2010
621
9

The structural basis of modified nucleosome recognition by 53BP1.
Marcus D Wilson, Samir Benlekbir, Amélie Fradet-Turcotte, Alana Sherker, Jean-Philippe Julien, Andrea McEwan, Sylvie M Noordermeer, Frank Sicheri, John L Rubinstein, Daniel Durocher. Nature 2016
124
9

A novel ubiquitin mark at the N-terminal tail of histone H2As targeted by RNF168 ubiquitin ligase.
Marco Gatti, Sabrina Pinato, Elena Maspero, Paolo Soffientini, Simona Polo, Lorenza Penengo. Cell Cycle 2012
110
9

Ubiquitin Ligases: Structure, Function, and Regulation.
Ning Zheng, Nitzan Shabek. Annu Rev Biochem 2017
385
9

Replication stress induces 53BP1-containing OPT domains in G1 cells.
Jeanine A Harrigan, Rimma Belotserkovskaya, Julia Coates, Daniela S Dimitrova, Sophie E Polo, Charles R Bradshaw, Peter Fraser, Stephen P Jackson. J Cell Biol 2011
217
8



RAP80-directed tuning of BRCA1 homologous recombination function at ionizing radiation-induced nuclear foci.
Yiduo Hu, Ralph Scully, Bijan Sobhian, Anyong Xie, Elena Shestakova, David M Livingston. Genes Dev 2011
160
8

RIF1 counteracts BRCA1-mediated end resection during DNA repair.
Lin Feng, Ka-Wing Fong, Jiadong Wang, Wenqi Wang, Junjie Chen. J Biol Chem 2013
176
8

Mitosis inhibits DNA double-strand break repair to guard against telomere fusions.
Alexandre Orthwein, Amélie Fradet-Turcotte, Sylvie M Noordermeer, Marella D Canny, Catherine M Brun, Jonathan Strecker, Cristina Escribano-Diaz, Daniel Durocher. Science 2014
198
8

BRCA1-associated exclusion of 53BP1 from DNA damage sites underlies temporal control of DNA repair.
J Ross Chapman, Alex J Sossick, Simon J Boulton, Stephen P Jackson. J Cell Sci 2012
197
8

Transcription-independent ARF regulation in oncogenic stress-mediated p53 responses.
Delin Chen, Jing Shan, Wei-Guo Zhu, Jun Qin, Wei Gu. Nature 2010
108
8

UBR5-mediated ubiquitination of ATMIN is required for ionizing radiation-induced ATM signaling and function.
Tianyi Zhang, Janet Cronshaw, Nnennaya Kanu, Ambrosius P Snijders, Axel Behrens. Proc Natl Acad Sci U S A 2014
39
20

Playing the end game: DNA double-strand break repair pathway choice.
J Ross Chapman, Martin R G Taylor, Simon J Boulton. Mol Cell 2012
929
8

Regulation of homologous recombination by RNF20-dependent H2B ubiquitination.
Kyosuke Nakamura, Akihiro Kato, Junya Kobayashi, Hiromi Yanagihara, Shuichi Sakamoto, Douglas V N P Oliveira, Mikio Shimada, Hiroshi Tauchi, Hidekazu Suzuki, Satoshi Tashiro,[...]. Mol Cell 2011
227
8

Requirement of ATM-dependent monoubiquitylation of histone H2B for timely repair of DNA double-strand breaks.
Lilach Moyal, Yaniv Lerenthal, Mali Gana-Weisz, Gilad Mass, Sairei So, Shih-Ya Wang, Berina Eppink, Young Min Chung, Gil Shalev, Efrat Shema,[...]. Mol Cell 2011
253
8

Acetylation regulates gluconeogenesis by promoting PEPCK1 degradation via recruiting the UBR5 ubiquitin ligase.
Wenqing Jiang, Shiwen Wang, Mengtao Xiao, Yan Lin, Lisha Zhou, Qunying Lei, Yue Xiong, Kun-Liang Guan, Shimin Zhao. Mol Cell 2011
243
7

RING finger nuclear factor RNF168 is important for defects in homologous recombination caused by loss of the breast cancer susceptibility factor BRCA1.
Meilen C Muñoz, Corentin Laulier, Amanda Gunn, Anita Cheng, Davide F Robbiani, André Nussenzweig, Jeremy M Stark. J Biol Chem 2012
36
19


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.