A citation-based method for searching scientific literature

Jelena Jakovljevic, Uli Ohmayer, Michael Gamalinda, Jason Talkish, Lisa Alexander, Jan Linnemann, Philipp Milkereit, John L Woolford. RNA 2012
Times Cited: 47







List of co-cited articles
576 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
718
70

Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre-rRNA processing.
Aarti Sahasranaman, Jill Dembowski, John Strahler, Philip Andrews, Janine Maddock, John L Woolford. EMBO J 2011
70
57


rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.
Gisela Pöll, Tobias Braun, Jelena Jakovljevic, Andreas Neueder, Steffen Jakob, John L Woolford, Herbert Tschochner, Philipp Milkereit. PLoS One 2009
70
48

A hierarchical model for assembly of eukaryotic 60S ribosomal subunit domains.
Michael Gamalinda, Uli Ohmayer, Jelena Jakovljevic, Beril Kumcuoglu, Joshua Woolford, Bertrade Mbom, Lawrence Lin, John L Woolford. Genes Dev 2014
77
48

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
431
46

Yeast polypeptide exit tunnel ribosomal proteins L17, L35 and L37 are necessary to recruit late-assembling factors required for 27SB pre-rRNA processing.
Michael Gamalinda, Jelena Jakovljevic, Reyes Babiano, Jason Talkish, Jesús de la Cruz, John L Woolford. Nucleic Acids Res 2013
39
53

Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes.
Jingyu Zhang, Piyanun Harnpicharnchai, Jelena Jakovljevic, Lan Tang, Yurong Guo, Marlene Oeffinger, Michael P Rout, Shawna L Hiley, Timothy Hughes, John L Woolford. Genes Dev 2007
138
38

Analysis of the in vivo assembly pathway of eukaryotic 40S ribosomal proteins.
Sébastien Ferreira-Cerca, Gisela Pöll, Holger Kühn, Andreas Neueder, Steffen Jakob, Herbert Tschochner, Philipp Milkereit. Mol Cell 2007
106
34


Sequential protein association with nascent 60S ribosomal particles.
Cosmin Saveanu, Abdelkader Namane, Pierre-Emmanuel Gleizes, Alice Lebreton, Jean-Claude Rousselle, Jacqueline Noaillac-Depeyre, Nicole Gas, Alain Jacquier, Micheline Fromont-Racine. Mol Cell Biol 2003
157
34

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae.
Jason Talkish, Jingyu Zhang, Jelena Jakovljevic, Edward W Horsey, John L Woolford. Nucleic Acids Res 2012
46
34

Saccharomyces cerevisiae ribosomal protein L26 is not essential for ribosome assembly and function.
Reyes Babiano, Michael Gamalinda, John L Woolford, Jesús de la Cruz. Mol Cell Biol 2012
40
40

Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Bettina Bradatsch, Christoph Leidig, Sander Granneman, Marén Gnädig, David Tollervey, Bettina Böttcher, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2012
85
34

Studies on the assembly characteristics of large subunit ribosomal proteins in S. cerevisae.
Uli Ohmayer, Michael Gamalinda, Martina Sauert, Julius Ossowski, Gisela Pöll, Jan Linnemann, Thomas Hierlmeier, Jorge Perez-Fernandez, Beril Kumcuoglu, Isabelle Leger-Silvestre,[...]. PLoS One 2013
38
42

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Sofia Arpagaus, Nenad Ban. Science 2011
243
31

Assembly of bacterial ribosomes.
Zahra Shajani, Michael T Sykes, James R Williamson. Annu Rev Biochem 2011
288
29

Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function.
Sébastien Ferreira-Cerca, Gisela Pöll, Pierre-Emmanuel Gleizes, Herbert Tschochner, Philipp Milkereit. Mol Cell 2005
216
29

Mechanochemical removal of ribosome biogenesis factors from nascent 60S ribosomal subunits.
Cornelia Ulbrich, Meikel Diepholz, Jochen Bassler, Dieter Kressler, Brigitte Pertschy, Kyriaki Galani, Bettina Böttcher, Ed Hurt. Cell 2009
103
27

Driving ribosome assembly.
Dieter Kressler, Ed Hurt, Jochen Bassler. Biochim Biophys Acta 2010
332
27

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
408
27

Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.
Basil J Greber, Daniel Boehringer, Christian Montellese, Nenad Ban. Nat Struct Mol Biol 2012
72
27

Maturation of eukaryotic ribosomes: acquisition of functionality.
Vikram Govind Panse, Arlen W Johnson. Trends Biochem Sci 2010
141
27

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
175
27

Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps.
C Saveanu, D Bienvenu, A Namane, P E Gleizes, N Gas, A Jacquier, M Fromont-Racine. EMBO J 2001
151
25

Composition and functional characterization of yeast 66S ribosome assembly intermediates.
P Harnpicharnchai, J Jakovljevic, E Horsey, T Miles, J Roman, M Rout, D Meagher, B Imai, Y Guo, C J Brame,[...]. Mol Cell 2001
244
25

Role and dynamics of the ribosomal protein P0 and its related trans-acting factor Mrt4 during ribosome assembly in Saccharomyces cerevisiae.
María Rodríguez-Mateos, Juan J García-Gómez, Rosario Francisco-Velilla, Miguel Remacha, Jesús de la Cruz, Juan P G Ballesta. Nucleic Acids Res 2009
54
25

Functional analysis of Saccharomyces cerevisiae ribosomal protein Rpl3p in ribosome synthesis.
Iván V Rosado, Dieter Kressler, Jesús de la Cruz. Nucleic Acids Res 2007
39
30

Ytm1, Nop7, and Erb1 form a complex necessary for maturation of yeast 66S preribosomes.
Tiffany D Miles, Jelena Jakovljevic, Edward W Horsey, Piyanun Harnpicharnchai, Lan Tang, John L Woolford. Mol Cell Biol 2005
74
25

Has1 regulates consecutive maturation and processing steps for assembly of 60S ribosomal subunits.
Jill A Dembowski, Benjamin Kuo, John L Woolford. Nucleic Acids Res 2013
34
35

Yeast ribosomal protein L7 and its homologue Rlp7 are simultaneously present at distinct sites on pre-60S ribosomal particles.
Reyes Babiano, Gwenael Badis, Cosmin Saveanu, Abdelkader Namane, Antonia Doyen, Antonio Díaz-Quintana, Alain Jacquier, Micheline Fromont-Racine, Jesús de la Cruz. Nucleic Acids Res 2013
19
63

Ribosome assembly factors Pwp1 and Nop12 are important for folding of 5.8S rRNA during ribosome biogenesis in Saccharomyces cerevisiae.
Jason Talkish, Ian Winsten Campbell, Aarti Sahasranaman, Jelena Jakovljevic, John L Woolford. Mol Cell Biol 2014
23
52

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
322
25

Has1p, a member of the DEAD-box family, is required for 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae.
Bertrand Emery, Jesús de la Cruz, Sanda Rocak, Olivier Deloche, Patrick Linder. Mol Microbiol 2004
63
23

Nsa2 is an unstable, conserved factor required for the maturation of 27 SB pre-rRNAs.
Alice Lebreton, Cosmin Saveanu, Laurence Decourty, Alain Jacquier, Micheline Fromont-Racine. J Biol Chem 2006
39
28

60S ribosomal subunit assembly dynamics defined by semi-quantitative mass spectrometry of purified complexes.
Alice Lebreton, Jean-Claude Rousselle, Pascal Lenormand, Abdelkader Namane, Alain Jacquier, Micheline Fromont-Racine, Cosmin Saveanu. Nucleic Acids Res 2008
42
26

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
M S Longtine, A McKenzie, D J Demarini, N G Shah, A Wach, A Brachat, P Philippsen, J R Pringle. Yeast 1998
23

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.
Kai-Yin Lo, Zhihua Li, Cyril Bussiere, Stefan Bresson, Edward M Marcotte, Arlen W Johnson. Mol Cell 2010
132
23

Defining the order in which Nmd3p and Rpl10p load onto nascent 60S ribosomal subunits.
Matthew West, John B Hedges, Anthony Chen, Arlen W Johnson. Mol Cell Biol 2005
99
23

Rlp7p is associated with 60S preribosomes, restricted to the granular component of the nucleolus, and required for pre-rRNA processing.
Olivier Gadal, Daniela Strauss, Elisabeth Petfalski, Pierre-Emmanuel Gleizes, Nicole Gas, David Tollervey, Ed Hurt. J Cell Biol 2002
62
23


Ebp2 and Brx1 function cooperatively in 60S ribosomal subunit assembly in Saccharomyces cerevisiae.
Kaori Shimoji, Jelena Jakovljevic, Kanako Tsuchihashi, Yuka Umeki, Kun Wan, Suzuka Kawasaki, Jason Talkish, John L Woolford, Keiko Mizuta. Nucleic Acids Res 2012
26
42

Quality control mechanisms during ribosome maturation.
Katrin Karbstein. Trends Cell Biol 2013
81
23

One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
225
23

Coupled GTPase and remodelling ATPase activities form a checkpoint for ribosome export.
Yoshitaka Matsuo, Sander Granneman, Matthias Thoms, Rizos-Georgios Manikas, David Tollervey, Ed Hurt. Nature 2014
90
23

60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Christoph Leidig, Matthias Thoms, Iris Holdermann, Bettina Bradatsch, Otto Berninghausen, Gert Bange, Irmgard Sinning, Ed Hurt, Roland Beckmann. Nat Commun 2014
89
23

Ribosome deficiency protects against ER stress in Saccharomyces cerevisiae.
Kristan K Steffen, Mark A McCormick, Kim M Pham, Vivian L MacKay, Joe R Delaney, Christopher J Murakami, Matt Kaeberlein, Brian K Kennedy. Genetics 2012
115
21

The economics of ribosome biosynthesis in yeast.
J R Warner. Trends Biochem Sci 1999
21

The role of human ribosomal proteins in the maturation of rRNA and ribosome production.
Sara Robledo, Rachel A Idol, Dan L Crimmins, Jack H Ladenson, Philip J Mason, Monica Bessler. RNA 2008
158
21

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.
Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis. Science 2011
154
21


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.