A citation-based method for searching scientific literature

Laura J Dumas, Majesta S O'Bleness, Jonathan M Davis, C Michael Dickens, Nathan Anderson, J G Keeney, Jay Jackson, Megan Sikela, Armin Raznahan, Jay Giedd, Judith Rapoport, Sandesh S C Nagamani, Ayelet Erez, Nicola Brunetti-Pierri, Rachel Sugalski, James R Lupski, Tasha Fingerlin, Sau Wai Cheung, James M Sikela. Am J Hum Genet 2012
Times Cited: 65







List of co-cited articles
500 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Human lineage-specific amplification, selection, and neuronal expression of DUF1220 domains.
Magdalena C Popesco, Erik J Maclaren, Janet Hopkins, Laura Dumas, Michael Cox, Lynne Meltesen, Loris McGavran, Gerald J Wyckoff, James M Sikela. Science 2006
124
52

Recurrent reciprocal 1q21.1 deletions and duplications associated with microcephaly or macrocephaly and developmental and behavioral abnormalities.
Nicola Brunetti-Pierri, Jonathan S Berg, Fernando Scaglia, John Belmont, Carlos A Bacino, Trilochan Sahoo, Seema R Lalani, Brett Graham, Brendan Lee, Marwan Shinawi,[...]. Nat Genet 2008
387
43

Evolutionary history and genome organization of DUF1220 protein domains.
Majesta S O'Bleness, C Michael Dickens, Laura J Dumas, Hildegard Kehrer-Sawatzki, Gerald J Wyckoff, James M Sikela. G3 (Bethesda) 2012
45
62

A novel gene family NBPF: intricate structure generated by gene duplications during primate evolution.
Karl Vandepoele, Nadine Van Roy, Katrien Staes, Frank Speleman, Frans van Roy. Mol Biol Evol 2005
93
38

DUF1220 domains, cognitive disease, and human brain evolution.
L Dumas, J M Sikela. Cold Spring Harb Symp Quant Biol 2009
40
60

Recurrent rearrangements of chromosome 1q21.1 and variable pediatric phenotypes.
Heather C Mefford, Andrew J Sharp, Carl Baker, Andy Itsara, Zhaoshi Jiang, Karen Buysse, Shuwen Huang, Viv K Maloney, John A Crolla, Diana Baralle,[...]. N Engl J Med 2008
513
33

DUF1220 dosage is linearly associated with increasing severity of the three primary symptoms of autism.
Jonathan M Davis, Veronica B Searles, Nathan Anderson, Jonathon Keeney, Laura Dumas, James M Sikela. PLoS Genet 2014
31
67

DUF1220 protein domains drive proliferation in human neural stem cells and are associated with increased cortical volume in anthropoid primates.
J G Keeney, J M Davis, J Siegenthaler, M D Post, B S Nielsen, W D Hopkins, J M Sikela. Brain Struct Funct 2015
33
57

The case for DUF1220 domain dosage as a primary contributor to anthropoid brain expansion.
Jonathon G Keeney, Laura Dumas, James M Sikela. Front Hum Neurosci 2014
23
82

Evolution of human-specific neural SRGAP2 genes by incomplete segmental duplication.
Megan Y Dennis, Xander Nuttle, Peter H Sudmant, Francesca Antonacci, Tina A Graves, Mikhail Nefedov, Jill A Rosenfeld, Saba Sajjadian, Maika Malig, Holland Kotkiewicz,[...]. Cell 2012
189
20

Lineage-specific gene duplication and loss in human and great ape evolution.
Andrew Fortna, Young Kim, Erik MacLaren, Kriste Marshall, Gretchen Hahn, Lynne Meltesen, Matthew Brenton, Raquel Hink, Sonya Burgers, Tina Hernandez-Boussard,[...]. PLoS Biol 2004
191
18

DUF1220 copy number is linearly associated with increased cognitive function as measured by total IQ and mathematical aptitude scores.
Jonathon M Davis, Veronica B Searles, Nathan Anderson, Jonathon Keeney, Armin Raznahan, L John Horwood, David M Fergusson, Martin A Kennedy, Jay Giedd, James M Sikela. Hum Genet 2015
17
70



Inhibition of SRGAP2 function by its human-specific paralogs induces neoteny during spine maturation.
Cécile Charrier, Kaumudi Joshi, Jaeda Coutinho-Budd, Ji-Eun Kim, Nelle Lambert, Jacqueline de Marchena, Wei-Lin Jin, Pierre Vanderhaeghen, Anirvan Ghosh, Takayuki Sassa,[...]. Cell 2012
207
16

Large recurrent microdeletions associated with schizophrenia.
Hreinn Stefansson, Dan Rujescu, Sven Cichon, Olli P H Pietiläinen, Andres Ingason, Stacy Steinberg, Ragnheidur Fossdal, Engilbert Sigurdsson, Thordur Sigmundsson, Jacobine E Buizer-Voskamp,[...]. Nature 2008
16

Evolution of genetic and genomic features unique to the human lineage.
Majesta O'Bleness, Veronica B Searles, Ajit Varki, Pascal Gagneux, James M Sikela. Nat Rev Genet 2012
80
16

Finished sequence and assembly of the DUF1220-rich 1q21 region using a haploid human genome.
Majesta O'Bleness, Veronica B Searles, C Michael Dickens, David Astling, Derek Albracht, Angel C Y Mak, Yvonne Y Y Lai, Chin Lin, Catherine Chu, Tina Graves,[...]. BMC Genomics 2014
28
39


Diversity of human copy number variation and multicopy genes.
Peter H Sudmant, Jacob O Kitzman, Francesca Antonacci, Can Alkan, Maika Malig, Anya Tsalenko, Nick Sampas, Laurakay Bruhn, Jay Shendure, Evan E Eichler. Science 2010
431
15


Gene copy number variation spanning 60 million years of human and primate evolution.
Laura Dumas, Young H Kim, Anis Karimpour-Fard, Michael Cox, Janet Hopkins, Jonathan R Pollack, James M Sikela. Genome Res 2007
112
13

Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion.
Marta Florio, Mareike Albert, Elena Taverna, Takashi Namba, Holger Brandl, Eric Lewitus, Christiane Haffner, Alex Sykes, Fong Kuan Wong, Jula Peters,[...]. Science 2015
258
13

Chromosome 1q21.1 contiguous gene deletion is associated with congenital heart disease.
Jesse Christiansen, John D Dyck, Basil G Elyas, Margaret Lilley, J Stephen Bamforth, Mark Hicks, Kathleen A Sprysak, Robert Tomaszewski, Shelagh M Haase, Leanne M Vicen-Wyhony,[...]. Circ Res 2004
104
12


Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome.
Andrew J Sharp, Sierra Hansen, Rebecca R Selzer, Ze Cheng, Regina Regan, Jane A Hurst, Helen Stewart, Sue M Price, Edward Blair, Raoul C Hennekam,[...]. Nat Genet 2006
428
12

A humanized version of Foxp2 affects cortico-basal ganglia circuits in mice.
Wolfgang Enard, Sabine Gehre, Kurt Hammerschmidt, Sabine M Hölter, Torsten Blass, Mehmet Somel, Martina K Brückner, Christiane Schreiweis, Christine Winter, Reinhard Sohr,[...]. Cell 2009
275
10

A high-coverage genome sequence from an archaic Denisovan individual.
Matthias Meyer, Martin Kircher, Marie-Theres Gansauge, Heng Li, Fernando Racimo, Swapan Mallick, Joshua G Schraiber, Flora Jay, Kay Prüfer, Cesare de Filippo,[...]. Science 2012
807
10

Human-specific loss of regulatory DNA and the evolution of human-specific traits.
Cory Y McLean, Philip L Reno, Alex A Pollen, Abraham I Bassan, Terence D Capellini, Catherine Guenther, Vahan B Indjeian, Xinhong Lim, Douglas B Menke, Bruce T Schaar,[...]. Nature 2011
251
10

Evolution and diversity of copy number variation in the great ape lineage.
Peter H Sudmant, John Huddleston, Claudia R Catacchio, Maika Malig, Ladeana W Hillier, Carl Baker, Kiana Mohajeri, Ivanela Kondova, Ronald E Bontrop, Stephan Persengiev,[...]. Genome Res 2013
82
10

Segmental duplications: organization and impact within the current human genome project assembly.
J A Bailey, A M Yavor, H F Massa, B J Trask, E E Eichler. Genome Res 2001
471
10



Molecular evolution of FOXP2, a gene involved in speech and language.
Wolfgang Enard, Molly Przeworski, Simon E Fisher, Cecilia S L Lai, Victor Wiebe, Takashi Kitano, Anthony P Monaco, Svante Pääbo. Nature 2002
628
9

Genome architecture, rearrangements and genomic disorders.
Paweł Stankiewicz, James R Lupski. Trends Genet 2002
625
9

Insights into hominid evolution from the gorilla genome sequence.
Aylwyn Scally, Julien Y Dutheil, LaDeana W Hillier, Gregory E Jordan, Ian Goodhead, Javier Herrero, Asger Hobolth, Tuuli Lappalainen, Thomas Mailund, Tomas Marques-Bonet,[...]. Nature 2012
384
9

An RNA gene expressed during cortical development evolved rapidly in humans.
Katherine S Pollard, Sofie R Salama, Nelle Lambert, Marie-Alexandra Lambot, Sandra Coppens, Jakob S Pedersen, Sol Katzman, Bryan King, Courtney Onodera, Adam Siepel,[...]. Nature 2006
547
9

Neuron number and size in prefrontal cortex of children with autism.
Eric Courchesne, Peter R Mouton, Michael E Calhoun, Katerina Semendeferi, Clelia Ahrens-Barbeau, Melodie J Hallet, Cynthia Carter Barnes, Karen Pierce. JAMA 2011
390
9


Recent segmental duplications in the human genome.
Jeffrey A Bailey, Zhiping Gu, Royden A Clark, Knut Reinert, Rhea V Samonte, Stuart Schwartz, Mark D Adams, Eugene W Myers, Peter W Li, Evan E Eichler. Science 2002
927
9

Changing the name of the NBPF/DUF1220 domain to the Olduvai domain.
James M Sikela, Frans van Roy. F1000Res 2017
7
85

Copy number variants in schizophrenia: confirmation of five previous findings and new evidence for 3q29 microdeletions and VIPR2 duplications.
Douglas F Levinson, Jubao Duan, Sang Oh, Kai Wang, Alan R Sanders, Jianxin Shi, Nancy Zhang, Bryan J Mowry, Ann Olincy, Farooq Amin,[...]. Am J Psychiatry 2011
314
7

Functional impact of global rare copy number variation in autism spectrum disorders.
Dalila Pinto, Alistair T Pagnamenta, Lambertus Klei, Richard Anney, Daniele Merico, Regina Regan, Judith Conroy, Tiago R Magalhaes, Catarina Correia, Brett S Abrahams,[...]. Nature 2010
7



Human-specific gain of function in a developmental enhancer.
Shyam Prabhakar, Axel Visel, Jennifer A Akiyama, Malak Shoukry, Keith D Lewis, Amy Holt, Ingrid Plajzer-Frick, Harris Morrison, David R Fitzpatrick, Veena Afzal,[...]. Science 2008
198
7

Reconstructing the evolutionary history of microcephalin, a gene controlling human brain size.
Patrick D Evans, Jeffrey R Anderson, Eric J Vallender, Sun Shim Choi, Bruce T Lahn. Hum Mol Genet 2004
124
7


Proximal microdeletions and microduplications of 1q21.1 contribute to variable abnormal phenotypes.
Jill A Rosenfeld, Ryan N Traylor, G Bradley Schaefer, Elizabeth W McPherson, Blake C Ballif, Eva Klopocki, Stefan Mundlos, Lisa G Shaffer, Arthur S Aylsworth. Eur J Hum Genet 2012
61
8

Evidence of brain overgrowth in the first year of life in autism.
Eric Courchesne, Ruth Carper, Natacha Akshoomoff. JAMA 2003
622
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.