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Times Cited: 9958
Times Cited: 9958
Times Cited
Times Co-cited
Similarity
Integrative analysis of 111 reference human epigenomes.
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The Encyclopedia of DNA elements (ENCODE): data portal update.
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A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
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Long-range enhancer-promoter contacts in gene expression control.
Stefan Schoenfelder, Peter Fraser. Nat Rev Genet 2019
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STAR: ultrafast universal RNA-seq aligner.
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Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
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Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
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A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
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Topological domains in mammalian genomes identified by analysis of chromatin interactions.
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Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
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The accessible chromatin landscape of the human genome.
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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.
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The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions.
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Fast and accurate short read alignment with Burrows-Wheeler transform.
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ChromHMM: automating chromatin-state discovery and characterization.
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The NIH Roadmap Epigenomics Mapping Consortium.
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Genome-wide quantitative enhancer activity maps identified by STARR-seq.
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Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
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BEDTools: a flexible suite of utilities for comparing genomic features.
Aaron R Quinlan, Ira M Hall. Bioinformatics 2010
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An atlas of active enhancers across human cell types and tissues.
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Robin Andersson, Claudia Gebhard, Irene Miguel-Escalada, Ilka Hoof, Jette Bornholdt, Mette Boyd, Yun Chen, Xiaobei Zhao, Christian Schmidl, Takahiro Suzuki,[...]. Nature 2014
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Histone H3K27ac separates active from poised enhancers and predicts developmental state.
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Chromatin architecture reorganization during stem cell differentiation.
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Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.
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Gateways to the FANTOM5 promoter level mammalian expression atlas.
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CADD: predicting the deleteriousness of variants throughout the human genome.
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
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Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9.
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Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions.
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Spatial partitioning of the regulatory landscape of the X-inactivation centre.
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The 4D nucleome project.
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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
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Functional mapping and annotation of genetic associations with FUMA.
Kyoko Watanabe, Erdogan Taskesen, Arjen van Bochoven, Danielle Posthuma. Nat Commun 2017
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Partitioning heritability by functional annotation using genome-wide association summary statistics.
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Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types.
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Alan P Boyle, Sean Davis, Hennady P Shulha, Paul Meltzer, Elliott H Margulies, Zhiping Weng, Terrence S Furey, Gregory E Crawford. Cell 2008
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Expanded encyclopaedias of DNA elements in the human and mouse genomes.
Jill E Moore, Michael J Purcaro, Henry E Pratt, Charles B Epstein, Noam Shoresh, Jessika Adrian, Trupti Kawli, Carrie A Davis, Alexander Dobin, Rajinder Kaul,[...]. Nature 2020
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Jason D Buenrostro, Paul G Giresi, Lisa C Zaba, Howard Y Chang, William J Greenleaf. Nat Methods 2013
Jason D Buenrostro, Paul G Giresi, Lisa C Zaba, Howard Y Chang, William J Greenleaf. Nat Methods 2013
5
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.