A citation-based method for searching scientific literature

Emmanuel L Gautier, Tal Shay, Jennifer Miller, Melanie Greter, Claudia Jakubzick, Stoyan Ivanov, Julie Helft, Andrew Chow, Kutlu G Elpek, Simon Gordonov, Amin R Mazloom, Avi Ma'ayan, Wei-Jen Chua, Ted H Hansen, Shannon J Turley, Miriam Merad, Gwendalyn J Randolph. Nat Immunol 2012
Times Cited: 1327







List of co-cited articles
955 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment.
Yonit Lavin, Deborah Winter, Ronnie Blecher-Gonen, Eyal David, Hadas Keren-Shaul, Miriam Merad, Steffen Jung, Ido Amit. Cell 2014
27

Two distinct interstitial macrophage populations coexist across tissues in specific subtissular niches.
Svetoslav Chakarov, Hwee Ying Lim, Leonard Tan, Sheau Yng Lim, Peter See, Josephine Lum, Xiao-Meng Zhang, Shihui Foo, Satoshi Nakamizo, Kaibo Duan,[...]. Science 2019
351
20

Tissue-resident macrophages self-maintain locally throughout adult life with minimal contribution from circulating monocytes.
Daigo Hashimoto, Andrew Chow, Clara Noizat, Pearline Teo, Mary Beth Beasley, Marylene Leboeuf, Christian D Becker, Peter See, Jeremy Price, Daniel Lucas,[...]. Immunity 2013
19

Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis.
Simon Yona, Ki-Wook Kim, Yochai Wolf, Alexander Mildner, Diana Varol, Michal Breker, Dalit Strauss-Ayali, Sergey Viukov, Martin Guilliams, Alexander Misharin,[...]. Immunity 2013
19

Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors.
Elisa Gomez Perdiguero, Kay Klapproth, Christian Schulz, Katrin Busch, Emanuele Azzoni, Lucile Crozet, Hannah Garner, Celine Trouillet, Marella F de Bruijn, Frederic Geissmann,[...]. Nature 2015
18

Tissue-Resident Macrophage Ontogeny and Homeostasis.
Florent Ginhoux, Martin Guilliams. Immunity 2016
873
18

A lineage of myeloid cells independent of Myb and hematopoietic stem cells.
Christian Schulz, Elisa Gomez Perdiguero, Laurent Chorro, Heather Szabo-Rogers, Nicolas Cagnard, Katrin Kierdorf, Marco Prinz, Bishan Wu, Sten Eirik W Jacobsen, Jeffrey W Pollard,[...]. Science 2012
16

Fate mapping analysis reveals that adult microglia derive from primitive macrophages.
Florent Ginhoux, Melanie Greter, Marylene Leboeuf, Sayan Nandi, Peter See, Solen Gokhan, Mark F Mehler, Simon J Conway, Lai Guan Ng, E Richard Stanley,[...]. Science 2010
15

Alveolar macrophages develop from fetal monocytes that differentiate into long-lived cells in the first week of life via GM-CSF.
Martin Guilliams, Ismé De Kleer, Sandrine Henri, Sijranke Post, Leen Vanhoutte, Sofie De Prijck, Kim Deswarte, Bernard Malissen, Hamida Hammad, Bart N Lambrecht. J Exp Med 2013
716
15

Environment drives selection and function of enhancers controlling tissue-specific macrophage identities.
David Gosselin, Verena M Link, Casey E Romanoski, Gregory J Fonseca, Dawn Z Eichenfield, Nathanael J Spann, Joshua D Stender, Hyun B Chun, Hannah Garner, Frederic Geissmann,[...]. Cell 2014
809
13

Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span.
Alexander V Misharin, Luisa Morales-Nebreda, Paul A Reyfman, Carla M Cuda, James M Walter, Alexandra C McQuattie-Pimentel, Ching-I Chen, Kishore R Anekalla, Nikita Joshi, Kinola J N Williams,[...]. J Exp Med 2017
468
13

Yolk Sac Macrophages, Fetal Liver, and Adult Monocytes Can Colonize an Empty Niche and Develop into Functional Tissue-Resident Macrophages.
Lianne van de Laar, Wouter Saelens, Sofie De Prijck, Liesbet Martens, Charlotte L Scott, Gert Van Isterdael, Eik Hoffmann, Rudi Beyaert, Yvan Saeys, Bart N Lambrecht,[...]. Immunity 2016
342
13

The microglial sensome revealed by direct RNA sequencing.
Suzanne E Hickman, Nathan D Kingery, Toshiro K Ohsumi, Mark L Borowsky, Li-chong Wang, Terry K Means, Joseph El Khoury. Nat Neurosci 2013
900
11

Embryonic and adult-derived resident cardiac macrophages are maintained through distinct mechanisms at steady state and during inflammation.
Slava Epelman, Kory J Lavine, Anna E Beaudin, Dorothy K Sojka, Javier A Carrero, Boris Calderon, Thaddeus Brija, Emmanuel L Gautier, Stoyan Ivanov, Ansuman T Satpathy,[...]. Immunity 2014
844
11

Macrophage activation and polarization: nomenclature and experimental guidelines.
Peter J Murray, Judith E Allen, Subhra K Biswas, Edward A Fisher, Derek W Gilroy, Sergij Goerdt, Siamon Gordon, John A Hamilton, Lionel B Ivashkiv, Toby Lawrence,[...]. Immunity 2014
11

C-Myb(+) erythro-myeloid progenitor-derived fetal monocytes give rise to adult tissue-resident macrophages.
Guillaume Hoeffel, Jinmiao Chen, Yonit Lavin, Donovan Low, Francisca F Almeida, Peter See, Anna E Beaudin, Josephine Lum, Ivy Low, E Camilla Forsberg,[...]. Immunity 2015
640
11

Three Unique Interstitial Macrophages in the Murine Lung at Steady State.
Sophie L Gibbings, Stacey M Thomas, Shaikh M Atif, Alexandra L McCubbrey, A Nicole Desch, Thomas Danhorn, Sonia M Leach, Donna L Bratton, Peter M Henson, William J Janssen,[...]. Am J Respir Cell Mol Biol 2017
203
11

Identification of a unique TGF-β-dependent molecular and functional signature in microglia.
Oleg Butovsky, Mark P Jedrychowski, Craig S Moore, Ron Cialic, Amanda J Lanser, Galina Gabriely, Thomas Koeglsperger, Ben Dake, Pauline M Wu, Camille E Doykan,[...]. Nat Neurosci 2014
10

A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.
Hadas Keren-Shaul, Amit Spinrad, Assaf Weiner, Orit Matcovitch-Natan, Raz Dvir-Szternfeld, Tyler K Ulland, Eyal David, Kuti Baruch, David Lara-Astaiso, Beata Toth,[...]. Cell 2017
9

Progressive replacement of embryo-derived cardiac macrophages with age.
Kaaweh Molawi, Yochai Wolf, Prashanth K Kandalla, Jeremy Favret, Nora Hagemeyer, Kathrin Frenzel, Alexander R Pinto, Kay Klapproth, Sandrine Henri, Bernard Malissen,[...]. J Exp Med 2014
294
9

Self-renewing resident cardiac macrophages limit adverse remodeling following myocardial infarction.
Sarah A Dick, Jillian A Macklin, Sara Nejat, Abdul Momen, Xavier Clemente-Casares, Marwan G Althagafi, Jinmiao Chen, Crystal Kantores, Siyavash Hosseinzadeh, Laura Aronoff,[...]. Nat Immunol 2019
299
9

Exploring the full spectrum of macrophage activation.
David M Mosser, Justin P Edwards. Nat Rev Immunol 2008
9

Induction of the nuclear receptor PPAR-γ by the cytokine GM-CSF is critical for the differentiation of fetal monocytes into alveolar macrophages.
Christoph Schneider, Samuel P Nobs, Michael Kurrer, Hubert Rehrauer, Christoph Thiele, Manfred Kopf. Nat Immunol 2014
313
9

Non-classical tissue monocytes and two functionally distinct populations of interstitial macrophages populate the mouse lung.
Joey Schyns, Qiang Bai, Cecilia Ruscitti, Coraline Radermecker, Sebastiaan De Schepper, Svetoslav Chakarov, Frédéric Farnir, Dimitri Pirottin, Florent Ginhoux, Guy Boeckxstaens,[...]. Nat Commun 2019
88
10

Constant replenishment from circulating monocytes maintains the macrophage pool in the intestine of adult mice.
Calum C Bain, Alberto Bravo-Blas, Charlotte L Scott, Elisa Gomez Perdiguero, Frederic Geissmann, Sandrine Henri, Bernard Malissen, Lisa C Osborne, David Artis, Allan McI Mowat. Nat Immunol 2014
657
9

The chemokine system in diverse forms of macrophage activation and polarization.
Alberto Mantovani, Antonio Sica, Silvano Sozzani, Paola Allavena, Annunciata Vecchi, Massimo Locati. Trends Immunol 2004
8

M-1/M-2 macrophages and the Th1/Th2 paradigm.
C D Mills, K Kincaid, J M Alt, M J Heilman, A M Hill. J Immunol 2000
8

Origin and functions of tissue macrophages.
Slava Epelman, Kory J Lavine, Gwendalyn J Randolph. Immunity 2014
830
8

Macrophage biology in development, homeostasis and disease.
Thomas A Wynn, Ajay Chawla, Jeffrey W Pollard. Nature 2013
8

The Cytokine TGF-β Promotes the Development and Homeostasis of Alveolar Macrophages.
Xueyang Yu, Anne Buttgereit, Iva Lelios, Sebastian G Utz, Dilay Cansever, Burkhard Becher, Melanie Greter. Immunity 2017
146
8

Identification of a nerve-associated, lung-resident interstitial macrophage subset with distinct localization and immunoregulatory properties.
Basak B Ural, Stephen T Yeung, Payal Damani-Yokota, Joseph C Devlin, Maren de Vries, Paola Vera-Licona, Tasleem Samji, Catherine M Sawai, Geunhyo Jang, Oriana A Perez,[...]. Sci Immunol 2020
88
9

Fate Mapping via Ms4a3-Expression History Traces Monocyte-Derived Cells.
Zhaoyuan Liu, Yaqi Gu, Svetoslav Chakarov, Camille Bleriot, Immanuel Kwok, Xin Chen, Amanda Shin, Weijie Huang, Regine J Dress, Charles-Antoine Dutertre,[...]. Cell 2019
203
8


Tissue Resident CCR2- and CCR2+ Cardiac Macrophages Differentially Orchestrate Monocyte Recruitment and Fate Specification Following Myocardial Injury.
Geetika Bajpai, Andrea Bredemeyer, Wenjun Li, Konstantin Zaitsev, Andrew L Koenig, Inessa Lokshina, Jayaram Mohan, Brooke Ivey, His-Min Hsiao, Carla Weinheimer,[...]. Circ Res 2019
236
7

Macrophage plasticity and polarization: in vivo veritas.
Antonio Sica, Alberto Mantovani. J Clin Invest 2012
7

Protective and pathogenic functions of macrophage subsets.
Peter J Murray, Thomas A Wynn. Nat Rev Immunol 2011
7

Alternative activation of macrophages.
Siamon Gordon. Nat Rev Immunol 2003
7

Microglia emerge from erythromyeloid precursors via Pu.1- and Irf8-dependent pathways.
Katrin Kierdorf, Daniel Erny, Tobias Goldmann, Victor Sander, Christian Schulz, Elisa Gomez Perdiguero, Peter Wieghofer, Annette Heinrich, Pia Riemke, Christoph Hölscher,[...]. Nat Neurosci 2013
860
7

Hyaluronan Receptor LYVE-1-Expressing Macrophages Maintain Arterial Tone through Hyaluronan-Mediated Regulation of Smooth Muscle Cell Collagen.
Hwee Ying Lim, Sheau Yng Lim, Chek Kun Tan, Chung Hwee Thiam, Chi Ching Goh, Daniel Carbajo, Samantha Hui Shang Chew, Peter See, Svetoslav Chakarov, Xiao Nong Wang,[...]. Immunity 2018
117
7

Macrophages Facilitate Electrical Conduction in the Heart.
Maarten Hulsmans, Sebastian Clauss, Ling Xiao, Aaron D Aguirre, Kevin R King, Alan Hanley, William J Hucker, Eike M Wülfers, Gunnar Seemann, Gabriel Courties,[...]. Cell 2017
475
7


STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
7

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
7

Macrophages in Tissue Repair, Regeneration, and Fibrosis.
Thomas A Wynn, Kevin M Vannella. Immunity 2016
7

Identification of a tissue-specific, C/EBPβ-dependent pathway of differentiation for murine peritoneal macrophages.
Derek W Cain, Emily G O'Koren, Matthew J Kan, Mandy Womble, Gregory D Sempowski, Kristen Hopper, Michael D Gunn, Garnett Kelsoe. J Immunol 2013
122
7

Bone marrow-derived monocytes give rise to self-renewing and fully differentiated Kupffer cells.
Charlotte L Scott, Fang Zheng, Patrick De Baetselier, Liesbet Martens, Yvan Saeys, Sofie De Prijck, Saskia Lippens, Chloé Abels, Steve Schoonooghe, Geert Raes,[...]. Nat Commun 2016
432
7

Human and Mouse Transcriptome Profiling Identifies Cross-Species Homology in Pulmonary and Lymph Node Mononuclear Phagocytes.
Sonia M Leach, Sophie L Gibbings, Anita D Tewari, Shaikh M Atif, Brian Vestal, Thomas Danhorn, William J Janssen, Tor D Wager, Claudia V Jakubzick. Cell Rep 2020
24
29

Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species.
Rapolas Zilionis, Camilla Engblom, Christina Pfirschke, Virginia Savova, David Zemmour, Hatice D Saatcioglu, Indira Krishnan, Giorgia Maroni, Claire V Meyerovitz, Clara M Kerwin,[...]. Immunity 2019
485
7

Long-lived self-renewing bone marrow-derived macrophages displace embryo-derived cells to inhabit adult serous cavities.
Calum C Bain, Catherine A Hawley, Hannah Garner, Charlotte L Scott, Anika Schridde, Nicholas J Steers, Matthias Mack, Anagha Joshi, Martin Guilliams, Allan Mc I Mowat,[...]. Nat Commun 2016
184
7

Specification of tissue-resident macrophages during organogenesis.
Elvira Mass, Ivan Ballesteros, Matthias Farlik, Florian Halbritter, Patrick Günther, Lucile Crozet, Christian E Jacome-Galarza, Kristian Händler, Johanna Klughammer, Yasuhiro Kobayashi,[...]. Science 2016
441
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.