A citation-based method for searching scientific literature

Lucia L Lam, Eldon Emberly, Hunter B Fraser, Sarah M Neumann, Edith Chen, Gregory E Miller, Michael S Kobor. Proc Natl Acad Sci U S A 2012
Times Cited: 264







List of co-cited articles
1099 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Associations with early-life socio-economic position in adult DNA methylation.
Nada Borghol, Matthew Suderman, Wendy McArdle, Ariane Racine, Michael Hallett, Marcus Pembrey, Clyde Hertzman, Chris Power, Moshe Szyf. Int J Epidemiol 2012
233
23

Epigenetic programming by maternal behavior.
Ian C G Weaver, Nadia Cervoni, Frances A Champagne, Ana C D'Alessio, Shakti Sharma, Jonathan R Seckl, Sergiy Dymov, Moshe Szyf, Michael J Meaney. Nat Neurosci 2004
22



Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Martin J Aryee, Andrew E Jaffe, Hector Corrada-Bravo, Christine Ladd-Acosta, Andrew P Feinberg, Kasper D Hansen, Rafael A Irizarry. Bioinformatics 2014
16

Allele-specific FKBP5 DNA demethylation mediates gene-childhood trauma interactions.
Torsten Klengel, Divya Mehta, Christoph Anacker, Monika Rex-Haffner, Jens C Pruessner, Carmine M Pariante, Thaddeus W W Pace, Kristina B Mercer, Helen S Mayberg, Bekh Bradley,[...]. Nat Neurosci 2013
798
16

Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse.
Patrick O McGowan, Aya Sasaki, Ana C D'Alessio, Sergiy Dymov, Benoit Labonté, Moshe Szyf, Gustavo Turecki, Michael J Meaney. Nat Neurosci 2009
16

Genome-wide methylation profiles reveal quantitative views of human aging rates.
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
15

DNA methylation arrays as surrogate measures of cell mixture distribution.
Eugene Andres Houseman, William P Accomando, Devin C Koestler, Brock C Christensen, Carmen J Marsit, Heather H Nelson, John K Wiencke, Karl T Kelsey. BMC Bioinformatics 2012
14

Epigenetic vestiges of early developmental adversity: childhood stress exposure and DNA methylation in adolescence.
Marilyn J Essex, W Thomas Boyce, Clyde Hertzman, Lucia L Lam, Jeffrey M Armstrong, Sarah M A Neumann, Michael S Kobor. Child Dev 2013
227
14

Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array.
Magda E Price, Allison M Cotton, Lucia L Lam, Pau Farré, Eldon Emberly, Carolyn J Brown, Wendy P Robinson, Michael S Kobor. Epigenetics Chromatin 2013
307
13

DNA methylation and healthy human aging.
Meaghan J Jones, Sarah J Goodman, Michael S Kobor. Aging Cell 2015
344
13

Persistent epigenetic differences associated with prenatal exposure to famine in humans.
Bastiaan T Heijmans, Elmar W Tobi, Aryeh D Stein, Hein Putter, Gerard J Blauw, Ezra S Susser, P Eline Slagboom, L H Lumey. Proc Natl Acad Sci U S A 2008
12

Low early-life social class leaves a biological residue manifested by decreased glucocorticoid and increased proinflammatory signaling.
Gregory E Miller, Edith Chen, Alexandra K Fok, Hope Walker, Alvin Lim, Erin F Nicholls, Steve Cole, Michael S Kobor. Proc Natl Acad Sci U S A 2009
471
12

DNA extracted from saliva for methylation studies of psychiatric traits: evidence tissue specificity and relatedness to brain.
Alicia K Smith, Varun Kilaru, Torsten Klengel, Kristina B Mercer, Bekh Bradley, Karen N Conneely, Kerry J Ressler, Elisabeth B Binder. Am J Med Genet B Neuropsychiatr Genet 2015
182
11

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis.
Pan Du, Xiao Zhang, Chiang-Ching Huang, Nadereh Jafari, Warren A Kibbe, Lifang Hou, Simon M Lin. BMC Bioinformatics 2010
997
11

DNA methylation contributes to natural human variation.
Holger Heyn, Sebastian Moran, Irene Hernando-Herraez, Sergi Sayols, Antonio Gomez, Juan Sandoval, Dave Monk, Kenichiro Hata, Tomas Marques-Bonet, Liewei Wang,[...]. Genome Res 2013
217
11

Charting a dynamic DNA methylation landscape of the human genome.
Michael J Ziller, Hongcang Gu, Fabian Müller, Julie Donaghey, Linus T-Y Tsai, Oliver Kohlbacher, Philip L De Jager, Evan D Rosen, David A Bennett, Bradley E Bernstein,[...]. Nature 2013
768
11

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray.
Yi-an Chen, Mathieu Lemire, Sanaa Choufani, Darci T Butcher, Daria Grafodatskaya, Brent W Zanke, Steven Gallinger, Thomas J Hudson, Rosanna Weksberg. Epigenetics 2013
821
11

Life course socioeconomic status and DNA methylation in genes related to stress reactivity and inflammation: The multi-ethnic study of atherosclerosis.
Belinda L Needham, Jennifer A Smith, Wei Zhao, Xu Wang, Bhramar Mukherjee, Sharon L R Kardia, Carol A Shively, Teresa E Seeman, Yongmei Liu, Ava V Diez Roux. Epigenetics 2015
81
13

Social and physical environments early in development predict DNA methylation of inflammatory genes in young adulthood.
Thomas W McDade, Calen Ryan, Meaghan J Jones, Julia L MacIsaac, Alexander M Morin, Jess M Meyer, Judith B Borja, Gregory E Miller, Michael S Kobor, Christopher W Kuzawa. Proc Natl Acad Sci U S A 2017
60
18

Adjusting batch effects in microarray expression data using empirical Bayes methods.
W Evan Johnson, Cheng Li, Ariel Rabinovic. Biostatistics 2007
10

DNA methylation: roles in mammalian development.
Zachary D Smith, Alexander Meissner. Nat Rev Genet 2013
10

Population-specificity of human DNA methylation.
Hunter B Fraser, Lucia L Lam, Sarah M Neumann, Michael S Kobor. Genome Biol 2012
164
10

Genetic and environmental influences interact with age and sex in shaping the human methylome.
Jenny van Dongen, Michel G Nivard, Gonneke Willemsen, Jouke-Jan Hottenga, Quinta Helmer, Conor V Dolan, Erik A Ehli, Gareth E Davies, Maarten van Iterson, Charles E Breeze,[...]. Nat Commun 2016
138
10

High density DNA methylation array with single CpG site resolution.
Marina Bibikova, Bret Barnes, Chan Tsan, Vincent Ho, Brandy Klotzle, Jennie M Le, David Delano, Lu Zhang, Gary P Schroth, Kevin L Gunderson,[...]. Genomics 2011
10

Lasting epigenetic influence of early-life adversity on the BDNF gene.
Tania L Roth, Farah D Lubin, Adam J Funk, J David Sweatt. Biol Psychiatry 2009
760
10

Significant differences in global genomic DNA methylation by gender and race/ethnicity in peripheral blood.
Fang Fang Zhang, Roberto Cardarelli, Joan Carroll, Kimberly G Fulda, Manleen Kaur, Karina Gonzalez, Jamboor K Vishwanatha, Regina M Santella, Alfredo Morabia. Epigenetics 2011
239
10

The sva package for removing batch effects and other unwanted variation in high-throughput experiments.
Jeffrey T Leek, W Evan Johnson, Hilary S Parker, Andrew E Jaffe, John D Storey. Bioinformatics 2012
9

Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility.
Lovisa E Reinius, Nathalie Acevedo, Maaike Joerink, Göran Pershagen, Sven-Erik Dahlén, Dario Greco, Cilla Söderhäll, Annika Scheynius, Juha Kere. PLoS One 2012
631
9


Broad epigenetic signature of maternal care in the brain of adult rats.
Patrick O McGowan, Matthew Suderman, Aya Sasaki, Tony C T Huang, Michael Hallett, Michael J Meaney, Moshe Szyf. PLoS One 2011
264
9

Concordant and discordant DNA methylation signatures of aging in human blood and brain.
Pau Farré, Meaghan J Jones, Michael J Meaney, Eldon Emberly, Gustavo Turecki, Michael S Kobor. Epigenetics Chromatin 2015
77
11

Early life socioeconomic factors and genomic DNA methylation in mid-life.
Parisa Tehranifar, Hui-Chen Wu, Xiaozhou Fan, Julie D Flom, Jennifer S Ferris, Yoon Hee Cho, Karina Gonzalez, Regina M Santella, Mary Beth Terry. Epigenetics 2013
45
20


DNA methylation signatures triggered by prenatal maternal stress exposure to a natural disaster: Project Ice Storm.
Lei Cao-Lei, Renaud Massart, Matthew J Suderman, Ziv Machnes, Guillaume Elgbeili, David P Laplante, Moshe Szyf, Suzanne King. PLoS One 2014
153
8

An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease.
Steve Horvath, Michael Gurven, Morgan E Levine, Benjamin C Trumble, Hillard Kaplan, Hooman Allayee, Beate R Ritz, Brian Chen, Ake T Lu, Tammy M Rickabaugh,[...]. Genome Biol 2016
269
8

Passive and active DNA methylation and the interplay with genetic variation in gene regulation.
Maria Gutierrez-Arcelus, Tuuli Lappalainen, Stephen B Montgomery, Alfonso Buil, Halit Ongen, Alisa Yurovsky, Julien Bryois, Thomas Giger, Luciana Romano, Alexandra Planchon,[...]. Elife 2013
261
8


Differential methylation between ethnic sub-groups reflects the effect of genetic ancestry and environmental exposures.
Joshua M Galanter, Christopher R Gignoux, Sam S Oh, Dara Torgerson, Maria Pino-Yanes, Neeta Thakur, Celeste Eng, Donglei Hu, Scott Huntsman, Harold J Farber,[...]. Elife 2017
66
12

The effect of genotype and in utero environment on interindividual variation in neonate DNA methylomes.
Ai Ling Teh, Hong Pan, Li Chen, Mei-Lyn Ong, Shaillay Dogra, Johnny Wong, Julia L MacIsaac, Sarah M Mah, Lisa M McEwen, Seang-Mei Saw,[...]. Genome Res 2014
186
8

Global epigenomic reconfiguration during mammalian brain development.
Ryan Lister, Eran A Mukamel, Joseph R Nery, Mark Urich, Clare A Puddifoot, Nicholas D Johnson, Jacinta Lucero, Yun Huang, Andrew J Dwork, Matthew D Schultz,[...]. Science 2013
8

Increased methylation of glucocorticoid receptor gene (NR3C1) in adults with a history of childhood maltreatment: a link with the severity and type of trauma.
N Perroud, A Paoloni-Giacobino, P Prada, E Olié, A Salzmann, R Nicastro, S Guillaume, D Mouthon, C Stouder, K Dieben,[...]. Transl Psychiatry 2011
267
8


Child abuse, depression, and methylation in genes involved with stress, neural plasticity, and brain circuitry.
Natalie Weder, Huiping Zhang, Kevin Jensen, Bao Zhu Yang, Arthur Simen, Andrea Jackowski, Deborah Lipschitz, Heather Douglas-Palumberi, Margrat Ge, Francheska Perepletchikova,[...]. J Am Acad Child Adolesc Psychiatry 2014
181
8

Differential patterns of whole-genome DNA methylation in institutionalized children and children raised by their biological parents.
Oksana Yu Naumova, Maria Lee, Roman Koposov, Moshe Szyf, Mary Dozier, Elena L Grigorenko. Dev Psychopathol 2012
129
8

Epigenetic correlates of neonatal contact in humans.
Sarah R Moore, Lisa M McEwen, Jill Quirt, Alex Morin, Sarah M Mah, Ronald G Barr, W Thomas Boyce, Michael S Kobor. Dev Psychopathol 2017
30
26

Exploring the genetic basis of human population differences in DNA methylation and their causal impact on immune gene regulation.
Lucas T Husquin, Maxime Rotival, Maud Fagny, Hélène Quach, Nora Zidane, Lisa M McEwen, Julia L MacIsaac, Michael S Kobor, Hugues Aschard, Etienne Patin,[...]. Genome Biol 2018
33
24


Prenatal exposure to maternal depression, neonatal methylation of human glucocorticoid receptor gene (NR3C1) and infant cortisol stress responses.
Tim F Oberlander, Joanne Weinberg, Michael Papsdorf, Ruth Grunau, Shaila Misri, Angela M Devlin. Epigenetics 2008
830
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.