A citation-based method for searching scientific literature

Stefan Heckmann, Jiri Macas, Katrin Kumke, Jörg Fuchs, Veit Schubert, Lu Ma, Petr Novák, Pavel Neumann, Stefan Taudien, Matthias Platzer, Andreas Houben. Plant J 2013
Times Cited: 60







List of co-cited articles
746 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin.
André Marques, Tiago Ribeiro, Pavel Neumann, Jiří Macas, Petr Novák, Veit Schubert, Marco Pellino, Jörg Fuchs, Wei Ma, Markus Kuhlmann,[...]. Proc Natl Acad Sci U S A 2015
58
39

Holocentric chromosomes: convergent evolution, meiotic adaptations, and genomic analysis.
Daniël P Melters, Leocadia V Paliulis, Ian F Korf, Simon W L Chan. Chromosome Res 2012
154
36

Stretching the rules: monocentric chromosomes with multiple centromere domains.
Pavel Neumann, Alice Navrátilová, Elizabeth Schroeder-Reiter, Andrea Koblížková, Veronika Steinbauerová, Eva Chocholová, Petr Novák, Gerhard Wanner, Jiří Macas. PLoS Genet 2012
84
33

Alternative meiotic chromatid segregation in the holocentric plant Luzula elegans.
Stefan Heckmann, Maja Jankowska, Veit Schubert, Katrin Kumke, Wei Ma, Andreas Houben. Nat Commun 2014
56
30

Repeatless and repeat-based centromeres in potato: implications for centromere evolution.
Zhiyun Gong, Yufeng Wu, Andrea Koblízková, Giovana A Torres, Kai Wang, Marina Iovene, Pavel Neumann, Wenli Zhang, Petr Novák, C Robin Buell,[...]. Plant Cell 2012
148
26


High-throughput analysis of the satellitome illuminates satellite DNA evolution.
Francisco J Ruiz-Ruano, María Dolores López-León, Josefa Cabrero, Juan Pedro M Camacho. Sci Rep 2016
114
25



Holocentric chromosomes of Luzula elegans are characterized by a longitudinal centromere groove, chromosome bending, and a terminal nucleolus organizer region.
S Heckmann, E Schroeder-Reiter, K Kumke, L Ma, K Nagaki, M Murata, G Wanner, A Houben. Cytogenet Genome Res 2011
41
34

Satellite DNA in Plants: More than Just Rubbish.
Manuel A Garrido-Ramos. Cytogenet Genome Res 2015
85
23

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution.
Daniël P Melters, Keith R Bradnam, Hugh A Young, Natalie Telis, Michael R May, J Graham Ruby, Robert Sebra, Paul Peluso, John Eid, David Rank,[...]. Genome Biol 2013
245
21


Chiasmatic and achiasmatic inverted meiosis of plants with holocentric chromosomes.
Gabriela Cabral, André Marques, Veit Schubert, Andrea Pedrosa-Harand, Peter Schlögelhofer. Nat Commun 2014
46
28

Centromere identity from the DNA point of view.
Miroslav Plohl, Nevenka Meštrović, Brankica Mravinac. Chromosoma 2014
106
21

Centromeric and non-centromeric satellite DNA organisation differs in holocentric Rhynchospora species.
Tiago Ribeiro, André Marques, Petr Novák, Veit Schubert, André L L Vanzela, Jiri Macas, Andreas Houben, Andrea Pedrosa-Harand. Chromosoma 2017
27
48



Centromeres Off the Hook: Massive Changes in Centromere Size and Structure Following Duplication of CenH3 Gene in Fabeae Species.
Pavel Neumann, Zuzana Pavlíková, Andrea Koblížková, Iva Fuková, Veronika Jedličková, Petr Novák, Jiří Macas. Mol Biol Evol 2015
42
28

Recurrent loss of CenH3 is associated with independent transitions to holocentricity in insects.
Ines A Drinnenberg, Dakota deYoung, Steven Henikoff, Harmit Singh Malik. Elife 2014
132
20

An inverse relationship to germline transcription defines centromeric chromatin in C. elegans.
Reto Gassmann, Andreas Rechtsteiner, Karen W Yuen, Andrew Muroyama, Thea Egelhofer, Laura Gaydos, Francie Barron, Paul Maddox, Anthony Essex, Joost Monen,[...]. Nature 2012
117
18

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads.
Petr Novák, Laura Ávila Robledillo, Andrea Koblížková, Iva Vrbová, Pavel Neumann, Jirí Macas. Nucleic Acids Res 2017
126
18

Plant centromeric retrotransposons: a structural and cytogenetic perspective.
Pavel Neumann, Alice Navrátilová, Andrea Koblížková, Eduard Kejnovský, Eva Hřibová, Roman Hobza, Alex Widmer, Jaroslav Doležel, Jiří Macas. Mob DNA 2011
114
16


Restructuring of Holocentric Centromeres During Meiosis in the Plant Rhynchospora pubera.
André Marques, Veit Schubert, Andreas Houben, Andrea Pedrosa-Harand. Genetics 2016
20
50

Next generation sequencing-based analysis of repetitive DNA in the model dioecious [corrected] plant Silene latifolia.
Jiří Macas, Eduard Kejnovský, Pavel Neumann, Petr Novák, Andrea Koblížková, Boris Vyskot. PLoS One 2011
74
15

PlantSat: a specialized database for plant satellite repeats.
Jirí Macas, Tibor Mészáros, Marcela Nouzová. Bioinformatics 2002
83
15

Anti-phosphorylated histone H2AThr120: a universal microscopic marker for centromeric chromatin of mono- and holocentric plant species.
D Demidov, V Schubert, K Kumke, O Weiss, R Karimi-Ashtiyani, J Buttlar, S Heckmann, G Wanner, Q Dong, F Han,[...]. Cytogenet Genome Res 2014
30
30

Differential role of CENP-A in the segregation of holocentric C. elegans chromosomes during meiosis and mitosis.
Joost Monen, Paul S Maddox, Francie Hyndman, Karen Oegema, Arshad Desai. Nat Cell Biol 2005
139
15

In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.
Jiří Macas, Petr Novák, Jaume Pellicer, Jana Čížková, Andrea Koblížková, Pavel Neumann, Iva Fuková, Jaroslav Doležel, Laura J Kelly, Ilia J Leitch. PLoS One 2015
96
15

A histone-H3-like protein in C. elegans.
B J Buchwitz, K Ahmad, L L Moore, M B Roth, S Henikoff. Nature 1999
202
13

Hypervariable 3' UTR region of plant LTR-retrotransposons as a source of novel satellite repeats.
Jirí Macas, Andrea Koblízková, Alice Navrátilová, Pavel Neumann. Gene 2009
56
14

High frequency of centromere inactivation resulting in stable dicentric chromosomes of maize.
Fangpu Han, Jonathan C Lamb, James A Birchler. Proc Natl Acad Sci U S A 2006
212
13


Major evolutionary transitions in centromere complexity.
Harmit S Malik, Steven Henikoff. Cell 2009
241
13

CENH3 interacts with the centromeric retrotransposon cereba and GC-rich satellites and locates to centromeric substructures in barley.
Andreas Houben, Elizabeth Schroeder-Reiter, Kiyotaka Nagaki, Shuhei Nasuda, Gerhard Wanner, Minoru Murata, Takashi R Endo. Chromosoma 2007
76
13

Epigenetic regulation of centromeric chromatin: old dogs, new tricks?
Robin C Allshire, Gary H Karpen. Nat Rev Genet 2008
415
13

Neocentrics and holokinetics (holocentrics): chromosomes out of the centromeric rules.
M Guerra, G Cabral, M Cuacos, M González-García, M González-Sánchez, J Vega, M J Puertas. Cytogenet Genome Res 2010
38
21

Atypical centromeres in plants-what they can tell us.
Maria Cuacos, F Chris H Franklin, Stefan Heckmann. Front Plant Sci 2015
29
27


Satellite DNA: An Evolving Topic.
Manuel A Garrido-Ramos. Genes (Basel) 2017
167
13


Mitotic Spindle Attachment to the Holocentric Chromosomes of Cuscuta europaea Does Not Correlate With the Distribution of CENH3 Chromatin.
Ludmila Oliveira, Pavel Neumann, Tae-Soo Jang, Sonja Klemme, Veit Schubert, Andrea Koblížková, Andreas Houben, Jiří Macas. Front Plant Sci 2020
20
40

Chromatin immunoprecipitation cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species.
Hye-Ran Lee, Wenli Zhang, Tim Langdon, Weiwei Jin, Huihuang Yan, Zhukuan Cheng, Jiming Jiang. Proc Natl Acad Sci U S A 2005
130
11

Centromeric retroelements and satellites interact with maize kinetochore protein CENH3.
Cathy Xiaoyan Zhong, Joshua B Marshall, Christopher Topp, Rebecca Mroczek, Akio Kato, Kiyotaka Nagaki, James A Birchler, Jiming Jiang, R Kelly Dawe. Plant Cell 2002
265
11

Sequencing of a rice centromere uncovers active genes.
Kiyotaka Nagaki, Zhukuan Cheng, Shu Ouyang, Paul B Talbert, Mary Kim, Kristine M Jones, Steven Henikoff, C Robin Buell, Jiming Jiang. Nat Genet 2004
375
11

The differential loading of two barley CENH3 variants into distinct centromeric substructures is cell type- and development-specific.
Takayoshi Ishii, Raheleh Karimi-Ashtiyani, Ali Mohammad Banaei-Moghaddam, Veit Schubert, Jörg Fuchs, Andreas Houben. Chromosome Res 2015
30
23

The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres.
Tao Zhang, Paul B Talbert, Wenli Zhang, Yufeng Wu, Zujun Yang, Jorja G Henikoff, Steven Henikoff, Jiming Jiang. Proc Natl Acad Sci U S A 2013
62
11

Epigenetic Histone Marks of Extended Meta-Polycentric Centromeres of Lathyrus and Pisum Chromosomes.
Pavel Neumann, Veit Schubert, Iva Fuková, Jasper E Manning, Andreas Houben, Jiří Macas. Front Plant Sci 2016
19
36


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.