Phil G T Sanders, James Cotterell, James Sharpe, Mark Isalan. RNA Biol 2013
Times Cited: 3
Times Cited: 3
Times Cited
Times Co-cited
Similarity
An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation.
Amit Arora, Beatrix Suess. RNA Biol 2011
Amit Arora, Beatrix Suess. RNA Biol 2011
66
Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
66
RNA G-quadruplexes and their potential regulatory roles in translation.
Jingwen Song, Jean-Pierre Perreault, Ivan Topisirovic, Stéphane Richard. Translation (Austin) 2016
Jingwen Song, Jean-Pierre Perreault, Ivan Topisirovic, Stéphane Richard. Translation (Austin) 2016
66
Regulation of viral and cellular gene expression by Kaposi's sarcoma-associated herpesvirus polyadenylated nuclear RNA.
Cyprian C Rossetto, Margaret Tarrant-Elorza, Subhash Verma, Pravinkumar Purushothaman, Gregory S Pari. J Virol 2013
Cyprian C Rossetto, Margaret Tarrant-Elorza, Subhash Verma, Pravinkumar Purushothaman, Gregory S Pari. J Virol 2013
33
A G-quadruplex-interactive potent small-molecule inhibitor of telomerase exhibiting in vitro and in vivo antitumor activity.
Sharon M Gowan, John R Harrison, Lisa Patterson, Melanie Valenti, Martin A Read, Stephen Neidle, Lloyd R Kelland. Mol Pharmacol 2002
Sharon M Gowan, John R Harrison, Lisa Patterson, Melanie Valenti, Martin A Read, Stephen Neidle, Lloyd R Kelland. Mol Pharmacol 2002
33
G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription.
Susanna Cogoi, Luigi E Xodo. Nucleic Acids Res 2006
Susanna Cogoi, Luigi E Xodo. Nucleic Acids Res 2006
33
The genomes of the human herpesviruses: contents, relationships, and evolution.
D J McGeoch. Annu Rev Microbiol 1989
D J McGeoch. Annu Rev Microbiol 1989
33
G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
33
33
Formation of a unique cluster of G-quadruplex structures in the HIV-1 Nef coding region: implications for antiviral activity.
Rosalba Perrone, Matteo Nadai, Jerrod A Poe, Ilaria Frasson, Manlio Palumbo, Giorgio Palù, Thomas E Smithgall, Sara N Richter. PLoS One 2013
Rosalba Perrone, Matteo Nadai, Jerrod A Poe, Ilaria Frasson, Manlio Palumbo, Giorgio Palù, Thomas E Smithgall, Sara N Richter. PLoS One 2013
33
A dynamic G-quadruplex region regulates the HIV-1 long terminal repeat promoter.
Rosalba Perrone, Matteo Nadai, Ilaria Frasson, Jerrod A Poe, Elena Butovskaya, Thomas E Smithgall, Manlio Palumbo, Giorgio Palù, Sara N Richter. J Med Chem 2013
Rosalba Perrone, Matteo Nadai, Ilaria Frasson, Jerrod A Poe, Elena Butovskaya, Thomas E Smithgall, Manlio Palumbo, Giorgio Palù, Sara N Richter. J Med Chem 2013
33
A G-rich element forms a G-quadruplex and regulates BACE1 mRNA alternative splicing.
Jean-François Fisette, Daniel R Montagna, Mihaela-Rita Mihailescu, Michael S Wolfe. J Neurochem 2012
Jean-François Fisette, Daniel R Montagna, Mihaela-Rita Mihailescu, Michael S Wolfe. J Neurochem 2012
33
Mutagenesis of the herpesvirus saimiri terminal repeat region reveals important elements for virus production.
Robert E White, Lindsay Carline, Martin J Allday. J Virol 2007
Robert E White, Lindsay Carline, Martin J Allday. J Virol 2007
33
Fragments from both termini of the herpes simplex virus type 1 genome contain signals required for the encapsidation of viral DNA.
N D Stow, E C McMonagle, A J Davison. Nucleic Acids Res 1983
N D Stow, E C McMonagle, A J Davison. Nucleic Acids Res 1983
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Structure and stability of human telomeric sequence.
P Balagurumoorthy, S K Brahmachari. J Biol Chem 1994
P Balagurumoorthy, S K Brahmachari. J Biol Chem 1994
33
Functional profiling of a human cytomegalovirus genome.
Walter Dunn, Cassie Chou, Hong Li, Rong Hai, David Patterson, Viktor Stolc, Hua Zhu, Fenyong Liu. Proc Natl Acad Sci U S A 2003
Walter Dunn, Cassie Chou, Hong Li, Rong Hai, David Patterson, Viktor Stolc, Hua Zhu, Fenyong Liu. Proc Natl Acad Sci U S A 2003
33
A sequence-independent study of the influence of short loop lengths on the stability and topology of intramolecular DNA G-quadruplexes.
Anthony Bugaut, Shankar Balasubramanian. Biochemistry 2008
Anthony Bugaut, Shankar Balasubramanian. Biochemistry 2008
33
Identification of human telomeric repeat motifs at the genome termini of human herpesvirus 7: structural analysis and heterogeneity.
P Secchiero, J Nicholas, H Deng, T Xiaopeng, N van Loon, V R Ruvolo, Z N Berneman, M S Reitz, S Dewhurst. J Virol 1995
P Secchiero, J Nicholas, H Deng, T Xiaopeng, N van Loon, V R Ruvolo, Z N Berneman, M S Reitz, S Dewhurst. J Virol 1995
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The structure and coding organization of the genomic termini of Kaposi's sarcoma-associated herpesvirus.
M Lagunoff, D Ganem. Virology 1997
M Lagunoff, D Ganem. Virology 1997
33
Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
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DNA microarrays of the complex human cytomegalovirus genome: profiling kinetic class with drug sensitivity of viral gene expression.
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J Chambers, A Angulo, D Amaratunga, H Guo, Y Jiang, J S Wan, A Bittner, K Frueh, M R Jackson, P A Peterson,[...]. J Virol 1999
33
5'-UTR RNA G-quadruplexes: translation regulation and targeting.
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
33
Quadruplex-forming DNA sequences spread by retrotransposons may serve as genome regulators.
Eduard Kejnovsky, Matej Lexa. Mob Genet Elements 2014
Eduard Kejnovsky, Matej Lexa. Mob Genet Elements 2014
33
Genome wide nucleosome mapping for HSV-1 shows nucleosomes are deposited at preferred positions during lytic infection.
Jaewook Oh, Iryna F Sanders, Eric Z Chen, Hongzhe Li, John W Tobias, R Benjamin Isett, Sindura Penubarthi, Hao Sun, Don A Baldwin, Nigel W Fraser. PLoS One 2015
Jaewook Oh, Iryna F Sanders, Eric Z Chen, Hongzhe Li, John W Tobias, R Benjamin Isett, Sindura Penubarthi, Hao Sun, Don A Baldwin, Nigel W Fraser. PLoS One 2015
33
Timeless-dependent DNA replication-coupled recombination promotes Kaposi's Sarcoma-associated herpesvirus episome maintenance and terminal repeat stability.
Jayaraju Dheekollu, Horng-Shen Chen, Kenneth M Kaye, Paul M Lieberman. J Virol 2013
Jayaraju Dheekollu, Horng-Shen Chen, Kenneth M Kaye, Paul M Lieberman. J Virol 2013
33
ViPR: an open bioinformatics database and analysis resource for virology research.
Brett E Pickett, Eva L Sadat, Yun Zhang, Jyothi M Noronha, R Burke Squires, Victoria Hunt, Mengya Liu, Sanjeev Kumar, Sam Zaremba, Zhiping Gu,[...]. Nucleic Acids Res 2012
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33
A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target.
Shao-Ru Wang, Yuan-Qin Min, Jia-Qi Wang, Chao-Xing Liu, Bo-Shi Fu, Fan Wu, Ling-Yu Wu, Zhi-Xian Qiao, Yan-Yan Song, Guo-Hua Xu,[...]. Sci Adv 2016
Shao-Ru Wang, Yuan-Qin Min, Jia-Qi Wang, Chao-Xing Liu, Bo-Shi Fu, Fan Wu, Ling-Yu Wu, Zhi-Xian Qiao, Yan-Yan Song, Guo-Hua Xu,[...]. Sci Adv 2016
33
Sequences within the herpesvirus-conserved pac1 and pac2 motifs are required for cleavage and packaging of the murine cytomegalovirus genome.
M A McVoy, D E Nixon, S P Adler, E S Mocarski. J Virol 1998
M A McVoy, D E Nixon, S P Adler, E S Mocarski. J Virol 1998
33
Anti-HIV-1 activity of the G-quadruplex ligand BRACO-19.
Rosalba Perrone, Elena Butovskaya, Dirk Daelemans, Giorgio Palù, Christophe Pannecouque, Sara N Richter. J Antimicrob Chemother 2014
Rosalba Perrone, Elena Butovskaya, Dirk Daelemans, Giorgio Palù, Christophe Pannecouque, Sara N Richter. J Antimicrob Chemother 2014
33
The Herpes Simplex Virus-1 genome contains multiple clusters of repeated G-quadruplex: Implications for the antiviral activity of a G-quadruplex ligand.
Sara Artusi, Matteo Nadai, Rosalba Perrone, Maria Angela Biasolo, Giorgio Palù, Louis Flamand, Arianna Calistri, Sara N Richter. Antiviral Res 2015
Sara Artusi, Matteo Nadai, Rosalba Perrone, Maria Angela Biasolo, Giorgio Palù, Louis Flamand, Arianna Calistri, Sara N Richter. Antiviral Res 2015
33
KSHV 2.0: a comprehensive annotation of the Kaposi's sarcoma-associated herpesvirus genome using next-generation sequencing reveals novel genomic and functional features.
Carolina Arias, Ben Weisburd, Noam Stern-Ginossar, Alexandre Mercier, Alexis S Madrid, Priya Bellare, Meghan Holdorf, Jonathan S Weissman, Don Ganem. PLoS Pathog 2014
Carolina Arias, Ben Weisburd, Noam Stern-Ginossar, Alexandre Mercier, Alexis S Madrid, Priya Bellare, Meghan Holdorf, Jonathan S Weissman, Don Ganem. PLoS Pathog 2014
33
Genome-wide prediction of G4 DNA as regulatory motifs: role in Escherichia coli global regulation.
Pooja Rawal, Veera Bhadra Rao Kummarasetti, Jinoy Ravindran, Nirmal Kumar, Kangkan Halder, Rakesh Sharma, Mitali Mukerji, Swapan Kumar Das, Shantanu Chowdhury. Genome Res 2006
Pooja Rawal, Veera Bhadra Rao Kummarasetti, Jinoy Ravindran, Nirmal Kumar, Kangkan Halder, Rakesh Sharma, Mitali Mukerji, Swapan Kumar Das, Shantanu Chowdhury. Genome Res 2006
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FeatureExtract--extraction of sequence annotation made easy.
Rasmus Wernersson. Nucleic Acids Res 2005
Rasmus Wernersson. Nucleic Acids Res 2005
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G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
33
Transcriptional regulation of the Kaposi's sarcoma-associated herpesvirus K15 gene.
Emily L Wong, Blossom Damania. J Virol 2006
Emily L Wong, Blossom Damania. J Virol 2006
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The Epstein-Barr virus immediate-early gene product, BRLF1, interacts with the retinoblastoma protein during the viral lytic cycle.
V L Zacny, J Wilson, J S Pagano. J Virol 1998
V L Zacny, J Wilson, J S Pagano. J Virol 1998
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Human papillomavirus G-quadruplexes.
Katarína Tlučková, Maja Marušič, Petra Tóthová, Lubos Bauer, Primož Šket, Janez Plavec, Viktor Viglasky. Biochemistry 2013
Katarína Tlučková, Maja Marušič, Petra Tóthová, Lubos Bauer, Primož Šket, Janez Plavec, Viktor Viglasky. Biochemistry 2013
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Genome-wide analyses of recombination prone regions predict role of DNA structural motif in recombination.
Prithvi Mani, Vinod Kumar Yadav, Swapan Kumar Das, Shantanu Chowdhury. PLoS One 2009
Prithvi Mani, Vinod Kumar Yadav, Swapan Kumar Das, Shantanu Chowdhury. PLoS One 2009
33
Gene UL2 of herpes simplex virus type 1 encodes a uracil-DNA glycosylase.
J Mullaney, H W Moss, D J McGeoch. J Gen Virol 1989
J Mullaney, H W Moss, D J McGeoch. J Gen Virol 1989
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Regions of the terminal repetitions of the herpes simplex virus type 1 genome. Relationship to immunoglobulin switch-like DNA sequences.
J Gomez-Marquez, A Puga, A L Notkins. J Biol Chem 1985
J Gomez-Marquez, A Puga, A L Notkins. J Biol Chem 1985
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Dual roles for the telomeric repeats in chromosomally integrated human herpesvirus-6.
Tamae Ohye, Hidehito Inagaki, Masaru Ihira, Yuki Higashimoto, Koji Kato, Junko Oikawa, Hiroshi Yagasaki, Takahiro Niizuma, Yoshiyuki Takahashi, Seiji Kojima,[...]. Sci Rep 2014
Tamae Ohye, Hidehito Inagaki, Masaru Ihira, Yuki Higashimoto, Koji Kato, Junko Oikawa, Hiroshi Yagasaki, Takahiro Niizuma, Yoshiyuki Takahashi, Seiji Kojima,[...]. Sci Rep 2014
33
A G-quadruplex structure within the 5'-UTR of TRF2 mRNA represses translation in human cells.
Dennis Gomez, Aurore Guédin, Jean-Louis Mergny, Bernard Salles, Jean-François Riou, Marie-Paule Teulade-Fichou, Patrick Calsou. Nucleic Acids Res 2010
Dennis Gomez, Aurore Guédin, Jean-Louis Mergny, Bernard Salles, Jean-François Riou, Marie-Paule Teulade-Fichou, Patrick Calsou. Nucleic Acids Res 2010
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G-wires: self-assembly of a telomeric oligonucleotide, d(GGGGTTGGGG), into large superstructures.
T C Marsh, E Henderson. Biochemistry 1994
T C Marsh, E Henderson. Biochemistry 1994
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Structure and role of the terminal repeats of Epstein-Barr virus in processing and packaging of virion DNA.
J Zimmermann, W Hammerschmidt. J Virol 1995
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33
Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
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Genome-wide computational and expression analyses reveal G-quadruplex DNA motifs as conserved cis-regulatory elements in human and related species.
Anjali Verma, Kangkan Halder, Rashi Halder, Vinod Kumar Yadav, Pooja Rawal, Ram Krishna Thakur, Farhan Mohd, Abhay Sharma, Shantanu Chowdhury. J Med Chem 2008
Anjali Verma, Kangkan Halder, Rashi Halder, Vinod Kumar Yadav, Pooja Rawal, Ram Krishna Thakur, Farhan Mohd, Abhay Sharma, Shantanu Chowdhury. J Med Chem 2008
33
Identification of new herpesvirus gene homologs in the human genome.
Ria Holzerlandt, Christine Orengo, Paul Kellam, M Mar Albà. Genome Res 2002
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Viral enhancer mimicry of host innate-immune promoters.
Kai A Kropp, Ana Angulo, Peter Ghazal. PLoS Pathog 2014
Kai A Kropp, Ana Angulo, Peter Ghazal. PLoS Pathog 2014
33
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.