A citation-based method for searching scientific literature

Manuel Ascano, Neelanjan Mukherjee, Pradeep Bandaru, Jason B Miller, Jeffrey D Nusbaum, David L Corcoran, Christine Langlois, Mathias Munschauer, Scott Dewell, Markus Hafner, Zev Williams, Uwe Ohler, Thomas Tuschl. Nature 2012
Times Cited: 436







List of co-cited articles
1104 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism.
Jennifer C Darnell, Sarah J Van Driesche, Chaolin Zhang, Ka Ying Sharon Hung, Aldo Mele, Claire E Fraser, Elizabeth F Stone, Cynthia Chen, John J Fak, Sung Wook Chi,[...]. Cell 2011
63

A direct role for FMRP in activity-dependent dendritic mRNA transport links filopodial-spine morphogenesis to fragile X syndrome.
Jason B Dictenberg, Sharon A Swanger, Laura N Antar, Robert H Singer, Gary J Bassell. Dev Cell 2008
340
23

HITS-CLIP in various brain areas reveals new targets and new modalities of RNA binding by fragile X mental retardation protein.
Thomas Maurin, Kevin Lebrigand, Sara Castagnola, Agnès Paquet, Marielle Jarjat, Alexandra Popa, Mauro Grossi, Florence Rage, Barbara Bardoni. Nucleic Acids Res 2018
58
36

Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome.
V Brown, P Jin, S Ceman, J C Darnell, W T O'Donnell, S A Tenenbaum, X Jin, Y Feng, K D Wilkinson, J D Keene,[...]. Cell 2001
850
20

Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome.
A J Verkerk, M Pieretti, J S Sutcliffe, Y H Fu, D P Kuhl, A Pizzuti, O Reiner, S Richards, M F Victoria, F P Zhang. Cell 1991
18

Fragile X mental retardation protein regulates translation by binding directly to the ribosome.
Eileen Chen, Manjuli R Sharma, Xinying Shi, Rajendra K Agrawal, Simpson Joseph. Mol Cell 2014
133
17

Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function.
J C Darnell, K B Jensen, P Jin, V Brown, S T Warren, R B Darnell. Cell 2001
728
17

The fragile X syndrome protein represses activity-dependent translation through CYFIP1, a new 4E-BP.
Ilaria Napoli, Valentina Mercaldo, Pietro Pilo Boyl, Boris Eleuteri, Francesca Zalfa, Silvia De Rubeis, Daniele Di Marino, Evita Mohr, Marzia Massimi, Mattia Falconi,[...]. Cell 2008
401
17

Fragile X syndrome.
Randi J Hagerman, Elizabeth Berry-Kravis, Heather Cody Hazlett, Donald B Bailey, Herve Moine, R Frank Kooy, Flora Tassone, Ilse Gantois, Nahum Sonenberg, Jean Louis Mandel,[...]. Nat Rev Dis Primers 2017
220
16

Dysregulation and restoration of translational homeostasis in fragile X syndrome.
Joel D Richter, Gary J Bassell, Eric Klann. Nat Rev Neurosci 2015
157
15


Analysis of FMRP mRNA target datasets reveals highly associated mRNAs mediated by G-quadruplex structures formed via clustered WGGA sequences.
Joshua A Suhl, Pankaj Chopra, Bart R Anderson, Gary J Bassell, Stephen T Warren. Hum Mol Genet 2014
57
24

Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes.
Jennifer C Darnell, Claire E Fraser, Olga Mostovetsky, Giovanni Stefani, Thomas A Jones, Sean R Eddy, Robert B Darnell. Genes Dev 2005
199
13


Evidence that fragile X mental retardation protein is a negative regulator of translation.
B Laggerbauer, D Ostareck, E M Keidel, A Ostareck-Lederer, U Fischer. Hum Mol Genet 2001
439
12


Absence of expression of the FMR-1 gene in fragile X syndrome.
M Pieretti, F P Zhang, Y H Fu, S T Warren, B A Oostra, C T Caskey, D L Nelson. Cell 1991
11

A new function for the fragile X mental retardation protein in regulation of PSD-95 mRNA stability.
Francesca Zalfa, Boris Eleuteri, Kirsten S Dickson, Valentina Mercaldo, Silvia De Rubeis, Alessandra di Penta, Elisabetta Tabolacci, Pietro Chiurazzi, Giovanni Neri, Seth G N Grant,[...]. Nat Neurosci 2007
269
11

The fragile X mental retardation protein inhibits translation via interacting with mRNA.
Z Li, Y Zhang, L Ku, K D Wilkinson, S T Warren, Y Feng. Nucleic Acids Res 2001
351
11

Reversible inhibition of PSD-95 mRNA translation by miR-125a, FMRP phosphorylation, and mGluR signaling.
Ravi S Muddashetty, Vijayalaxmi C Nalavadi, Christina Gross, Xiaodi Yao, Lei Xing, Oskar Laur, Stephen T Warren, Gary J Bassell. Mol Cell 2011
268
11

FMR1 protein: conserved RNP family domains and selective RNA binding.
C T Ashley, K D Wilkinson, D Reines, S T Warren. Science 1993
582
11

Human FMRP contains an integral tandem Agenet (Tudor) and KH motif in the amino terminal domain.
Leila K Myrick, Hideharu Hashimoto, Xiaodong Cheng, Stephen T Warren. Hum Mol Genet 2015
58
18


Molecular mechanisms of fragile X syndrome: a twenty-year perspective.
Michael R Santoro, Steven M Bray, Stephen T Warren. Annu Rev Pathol 2012
352
11

Altered synaptic plasticity in a mouse model of fragile X mental retardation.
Kimberly M Huber, Sean M Gallagher, Stephen T Warren, Mark F Bear. Proc Natl Acad Sci U S A 2002
963
10

Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP.
Nikita Vasilyev, Anna Polonskaia, Jennifer C Darnell, Robert B Darnell, Dinshaw J Patel, Alexander Serganov. Proc Natl Acad Sci U S A 2015
102
10

Regulation of synaptic structure and function by FMRP-associated microRNAs miR-125b and miR-132.
Dieter Edbauer, Joel R Neilson, Kelly A Foster, Chi-Fong Wang, Daniel P Seeburg, Matthew N Batterton, Tomoko Tada, Bridget M Dolan, Phillip A Sharp, Morgan Sheng. Neuron 2010
538
10

Phosphorylation influences the translation state of FMRP-associated polyribosomes.
Stephanie Ceman, William T O'Donnell, Matt Reed, Stephana Patton, Jan Pohl, Stephen T Warren. Hum Mol Genet 2003
242
10

The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif.
C Schaeffer, B Bardoni, J L Mandel, B Ehresmann, C Ehresmann, H Moine. EMBO J 2001
360
10

RNA cargoes associating with FMRP reveal deficits in cellular functioning in Fmr1 null mice.
Kevin Y Miyashiro, Andrea Beckel-Mitchener, T Patrick Purk, Kevin G Becker, Tanya Barret, Lei Liu, Salvatore Carbonetto, Ivan Jeanne Weiler, William T Greenough, James Eberwine. Neuron 2003
391
10

Phosphoregulated FMRP phase separation models activity-dependent translation through bidirectional control of mRNA granule formation.
Brian Tsang, Jason Arsenault, Robert M Vernon, Hong Lin, Nahum Sonenberg, Lu-Yang Wang, Alaji Bah, Julie D Forman-Kay. Proc Natl Acad Sci U S A 2019
119
10

A novel function for fragile X mental retardation protein in translational activation.
Elias G Bechara, Marie Cecile Didiot, Mireille Melko, Laetitia Davidovic, Mounia Bensaid, Patrick Martin, Marie Castets, Philippe Pognonec, Edouard W Khandjian, Hervé Moine,[...]. PLoS Biol 2009
135
9

Dynamic translational and proteasomal regulation of fragile X mental retardation protein controls mGluR-dependent long-term depression.
Lingfei Hou, Marcia D Antion, Daoying Hu, Corinne M Spencer, Richard Paylor, Eric Klann. Neuron 2006
348
9

Fragile X mental retardation protein modulates the stability of its m6A-marked messenger RNA targets.
Feiran Zhang, Yunhee Kang, Mengli Wang, Yujing Li, Tianlei Xu, Wei Yang, Hongjun Song, Hao Wu, Qiang Shu, Peng Jin. Hum Mol Genet 2018
86
10

Identification of consensus binding sites clarifies FMRP binding determinants.
Bart R Anderson, Pankaj Chopra, Joshua A Suhl, Stephen T Warren, Gary J Bassell. Nucleic Acids Res 2016
34
26

Fragile X mental retardation protein and synaptic plasticity.
Michael S Sidorov, Benjamin D Auerbach, Mark F Bear. Mol Brain 2013
133
9

Discrimination of common and unique RNA-binding activities among Fragile X mental retardation protein paralogs.
Jennifer C Darnell, Claire E Fraser, Olga Mostovetsky, Robert B Darnell. Hum Mol Genet 2009
79
11

A census of human RNA-binding proteins.
Stefanie Gerstberger, Markus Hafner, Thomas Tuschl. Nat Rev Genet 2014
934
9


Fragile X syndrome: causes, diagnosis, mechanisms, and therapeutics.
Claudia Bagni, Flora Tassone, Giovanni Neri, Randi Hagerman. J Clin Invest 2012
195
8

Abnormal dendritic spines in fragile X knockout mice: maturation and pruning deficits.
T A Comery, J B Harris, P J Willems, B A Oostra, S A Irwin, I J Weiler, W T Greenough. Proc Natl Acad Sci U S A 1997
769
8


G-quartet-dependent recognition between the FMRP RGG box and RNA.
Andres Ramos, David Hollingworth, Annalisa Pastore. RNA 2003
95
8

A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins.
Akira Ishizuka, Mikiko C Siomi, Haruhiko Siomi. Genes Dev 2002
444
8

Fragile X mental retardation protein is associated with translating polyribosomes in neuronal cells.
Giovanni Stefani, Claire E Fraser, Jennifer C Darnell, Robert B Darnell. J Neurosci 2004
186
8

Regulatory discrimination of mRNAs by FMRP controls mouse adult neural stem cell differentiation.
Botao Liu, Yue Li, Emily E Stackpole, Annie Novak, Yu Gao, Yinghua Zhao, Xinyu Zhao, Joel D Richter. Proc Natl Acad Sci U S A 2018
46
17

The Fragile X mental retardation protein regulates matrix metalloproteinase 9 mRNA at synapses.
Aleksandra Janusz, Jacek Milek, Malgorzata Perycz, Laura Pacini, Claudia Bagni, Leszek Kaczmarek, Magdalena Dziembowska. J Neurosci 2013
80
10


Aberrant RNA translation in fragile X syndrome: From FMRP mechanisms to emerging therapeutic strategies.
Anwesha Banerjee, Marius F Ifrim, Arielle N Valdez, Nisha Raj, Gary J Bassell. Brain Res 2018
50
16

FMRP promotes RNA localization to neuronal projections through interactions between its RGG domain and G-quadruplex RNA sequences.
Raeann Goering, Laura I Hudish, Bryan B Guzman, Nisha Raj, Gary J Bassell, Holger A Russ, Daniel Dominguez, J Matthew Taliaferro. Elife 2020
32
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.