A citation-based method for searching scientific literature

Manuel Ascano, Neelanjan Mukherjee, Pradeep Bandaru, Jason B Miller, Jeffrey D Nusbaum, David L Corcoran, Christine Langlois, Mathias Munschauer, Scott Dewell, Markus Hafner, Zev Williams, Uwe Ohler, Thomas Tuschl. Nature 2012
Times Cited: 410







List of co-cited articles
1112 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism.
Jennifer C Darnell, Sarah J Van Driesche, Chaolin Zhang, Ka Ying Sharon Hung, Aldo Mele, Claire E Fraser, Elizabeth F Stone, Cynthia Chen, John J Fak, Sung Wook Chi,[...]. Cell 2011
70

HITS-CLIP in various brain areas reveals new targets and new modalities of RNA binding by fragile X mental retardation protein.
Thomas Maurin, Kevin Lebrigand, Sara Castagnola, Agnès Paquet, Marielle Jarjat, Alexandra Popa, Mauro Grossi, Florence Rage, Barbara Bardoni. Nucleic Acids Res 2018
51
50

A direct role for FMRP in activity-dependent dendritic mRNA transport links filopodial-spine morphogenesis to fragile X syndrome.
Jason B Dictenberg, Sharon A Swanger, Laura N Antar, Robert H Singer, Gary J Bassell. Dev Cell 2008
332
24

Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome.
V Brown, P Jin, S Ceman, J C Darnell, W T O'Donnell, S A Tenenbaum, X Jin, Y Feng, K D Wilkinson, J D Keene,[...]. Cell 2001
841
23

Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome.
A J Verkerk, M Pieretti, J S Sutcliffe, Y H Fu, D P Kuhl, A Pizzuti, O Reiner, S Richards, M F Victoria, F P Zhang. Cell 1991
20

Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function.
J C Darnell, K B Jensen, P Jin, V Brown, S T Warren, R B Darnell. Cell 2001
717
19

Dysregulation and restoration of translational homeostasis in fragile X syndrome.
Joel D Richter, Gary J Bassell, Eric Klann. Nat Rev Neurosci 2015
140
15

Altered synaptic plasticity in a mouse model of fragile X mental retardation.
Kimberly M Huber, Sean M Gallagher, Stephen T Warren, Mark F Bear. Proc Natl Acad Sci U S A 2002
940
14

RNA cargoes associating with FMRP reveal deficits in cellular functioning in Fmr1 null mice.
Kevin Y Miyashiro, Andrea Beckel-Mitchener, T Patrick Purk, Kevin G Becker, Tanya Barret, Lei Liu, Salvatore Carbonetto, Ivan Jeanne Weiler, William T Greenough, James Eberwine. Neuron 2003
384
14

Molecular mechanisms of fragile X syndrome: a twenty-year perspective.
Michael R Santoro, Steven M Bray, Stephen T Warren. Annu Rev Pathol 2012
334
14

The fragile X syndrome protein represses activity-dependent translation through CYFIP1, a new 4E-BP.
Ilaria Napoli, Valentina Mercaldo, Pietro Pilo Boyl, Boris Eleuteri, Francesca Zalfa, Silvia De Rubeis, Daniele Di Marino, Evita Mohr, Marzia Massimi, Mattia Falconi,[...]. Cell 2008
383
14

Fragile X mental retardation protein regulates translation by binding directly to the ribosome.
Eileen Chen, Manjuli R Sharma, Xinying Shi, Rajendra K Agrawal, Simpson Joseph. Mol Cell 2014
125
14


Fragile X syndrome.
Randi J Hagerman, Elizabeth Berry-Kravis, Heather Cody Hazlett, Donald B Bailey, Herve Moine, R Frank Kooy, Flora Tassone, Ilse Gantois, Nahum Sonenberg, Jean Louis Mandel,[...]. Nat Rev Dis Primers 2017
172
13

Analysis of FMRP mRNA target datasets reveals highly associated mRNAs mediated by G-quadruplex structures formed via clustered WGGA sequences.
Joshua A Suhl, Pankaj Chopra, Bart R Anderson, Gary J Bassell, Stephen T Warren. Hum Mol Genet 2014
52
25


Evidence that fragile X mental retardation protein is a negative regulator of translation.
B Laggerbauer, D Ostareck, E M Keidel, A Ostareck-Lederer, U Fischer. Hum Mol Genet 2001
434
12

The fragile X mental retardation protein inhibits translation via interacting with mRNA.
Z Li, Y Zhang, L Ku, K D Wilkinson, S T Warren, Y Feng. Nucleic Acids Res 2001
349
12

Reversible inhibition of PSD-95 mRNA translation by miR-125a, FMRP phosphorylation, and mGluR signaling.
Ravi S Muddashetty, Vijayalaxmi C Nalavadi, Christina Gross, Xiaodi Yao, Lei Xing, Oskar Laur, Stephen T Warren, Gary J Bassell. Mol Cell 2011
256
12

A new function for the fragile X mental retardation protein in regulation of PSD-95 mRNA stability.
Francesca Zalfa, Boris Eleuteri, Kirsten S Dickson, Valentina Mercaldo, Silvia De Rubeis, Alessandra di Penta, Elisabetta Tabolacci, Pietro Chiurazzi, Giovanni Neri, Seth G N Grant,[...]. Nat Neurosci 2007
265
12


Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes.
Jennifer C Darnell, Claire E Fraser, Olga Mostovetsky, Giovanni Stefani, Thomas A Jones, Sean R Eddy, Robert B Darnell. Genes Dev 2005
195
12


The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif.
C Schaeffer, B Bardoni, J L Mandel, B Ehresmann, C Ehresmann, H Moine. EMBO J 2001
355
11


FMR1 protein: conserved RNP family domains and selective RNA binding.
C T Ashley, K D Wilkinson, D Reines, S T Warren. Science 1993
574
10

The mGluR theory of fragile X mental retardation.
Mark F Bear, Kimberly M Huber, Stephen T Warren. Trends Neurosci 2004
10

Absence of expression of the FMR-1 gene in fragile X syndrome.
M Pieretti, F P Zhang, Y H Fu, S T Warren, B A Oostra, C T Caskey, D L Nelson. Cell 1991
10

Excess phosphoinositide 3-kinase subunit synthesis and activity as a novel therapeutic target in fragile X syndrome.
Christina Gross, Mika Nakamoto, Xiaodi Yao, Chi-Bun Chan, So Y Yim, Keqiang Ye, Stephen T Warren, Gary J Bassell. J Neurosci 2010
180
9

Dysregulation of mTOR signaling in fragile X syndrome.
Ali Sharma, Charles A Hoeffer, Yukihiro Takayasu, Takahiro Miyawaki, Sean M McBride, Eric Klann, R Suzanne Zukin. J Neurosci 2010
381
9

Phosphorylation influences the translation state of FMRP-associated polyribosomes.
Stephanie Ceman, William T O'Donnell, Matt Reed, Stephana Patton, Jan Pohl, Stephen T Warren. Hum Mol Genet 2003
235
9

Correction of fragile X syndrome in mice.
Gül Dölen, Emily Osterweil, B S Shankaranarayana Rao, Gordon B Smith, Benjamin D Auerbach, Sumantra Chattarji, Mark F Bear. Neuron 2007
674
9

A novel function for fragile X mental retardation protein in translational activation.
Elias G Bechara, Marie Cecile Didiot, Mireille Melko, Laetitia Davidovic, Mounia Bensaid, Patrick Martin, Marie Castets, Philippe Pognonec, Edouard W Khandjian, Hervé Moine,[...]. PLoS Biol 2009
131
9

Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP.
Nikita Vasilyev, Anna Polonskaia, Jennifer C Darnell, Robert B Darnell, Dinshaw J Patel, Alexander Serganov. Proc Natl Acad Sci U S A 2015
93
9

Dynamic translational and proteasomal regulation of fragile X mental retardation protein controls mGluR-dependent long-term depression.
Lingfei Hou, Marcia D Antion, Daoying Hu, Corinne M Spencer, Richard Paylor, Eric Klann. Neuron 2006
339
9

Human FMRP contains an integral tandem Agenet (Tudor) and KH motif in the amino terminal domain.
Leila K Myrick, Hideharu Hashimoto, Xiaodong Cheng, Stephen T Warren. Hum Mol Genet 2015
51
17

Fragile X mental retardation protein modulates the stability of its m6A-marked messenger RNA targets.
Feiran Zhang, Yunhee Kang, Mengli Wang, Yujing Li, Tianlei Xu, Wei Yang, Hongjun Song, Hao Wu, Qiang Shu, Peng Jin. Hum Mol Genet 2018
67
13

Regulatory discrimination of mRNAs by FMRP controls mouse adult neural stem cell differentiation.
Botao Liu, Yue Li, Emily E Stackpole, Annie Novak, Yu Gao, Yinghua Zhao, Xinyu Zhao, Joel D Richter. Proc Natl Acad Sci U S A 2018
41
21

Identification of consensus binding sites clarifies FMRP binding determinants.
Bart R Anderson, Pankaj Chopra, Joshua A Suhl, Stephen T Warren, Gary J Bassell. Nucleic Acids Res 2016
32
28

Fragile X mental retardation protein and synaptic plasticity.
Michael S Sidorov, Benjamin D Auerbach, Mark F Bear. Mol Brain 2013
126
9

Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway.
Peng Jin, Daniela C Zarnescu, Stephanie Ceman, Mika Nakamoto, Julie Mowrey, Thomas A Jongens, David L Nelson, Kevin Moses, Stephen T Warren. Nat Neurosci 2004
454
8

Genetic and acute CPEB1 depletion ameliorate fragile X pathophysiology.
Tsuyoshi Udagawa, Natalie G Farny, Mira Jakovcevski, Hanoch Kaphzan, Juan Marcos Alarcon, Shobha Anilkumar, Maria Ivshina, Jessica A Hurt, Kentaro Nagaoka, Vijayalaxmi C Nalavadi,[...]. Nat Med 2013
80
10

Increased expression of the PI3K enhancer PIKE mediates deficits in synaptic plasticity and behavior in fragile X syndrome.
Christina Gross, Chia-Wei Chang, Seth M Kelly, Aditi Bhattacharya, Sean M J McBride, Scott W Danielson, Michael Q Jiang, Chi Bun Chan, Keqiang Ye, Jay R Gibson,[...]. Cell Rep 2015
63
12

Synaptic, transcriptional and chromatin genes disrupted in autism.
Silvia De Rubeis, Xin He, Arthur P Goldberg, Christopher S Poultney, Kaitlin Samocha, A Erucment Cicek, Yan Kou, Li Liu, Menachem Fromer, Susan Walker,[...]. Nature 2014
8

Fragile X syndrome: causes, diagnosis, mechanisms, and therapeutics.
Claudia Bagni, Flora Tassone, Giovanni Neri, Randi Hagerman. J Clin Invest 2012
183
8

G-quartet-dependent recognition between the FMRP RGG box and RNA.
Andres Ramos, David Hollingworth, Annalisa Pastore. RNA 2003
93
8

Fragile X mental retardation protein is associated with translating polyribosomes in neuronal cells.
Giovanni Stefani, Claire E Fraser, Jennifer C Darnell, Robert B Darnell. J Neurosci 2004
180
8


Aberrant RNA translation in fragile X syndrome: From FMRP mechanisms to emerging therapeutic strategies.
Anwesha Banerjee, Marius F Ifrim, Arielle N Valdez, Nisha Raj, Gary J Bassell. Brain Res 2018
43
18

A census of human RNA-binding proteins.
Stefanie Gerstberger, Markus Hafner, Thomas Tuschl. Nat Rev Genet 2014
823
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.