A citation-based method for searching scientific literature

Tara M Thompson, Duaa Sharfi, Maria Lee, Carolyn M Yrigollen, Oksana Yu Naumova, Elena L Grigorenko. Behav Genet 2013
Times Cited: 42







List of co-cited articles
256 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DNA extracted from saliva for methylation studies of psychiatric traits: evidence tissue specificity and relatedness to brain.
Alicia K Smith, Varun Kilaru, Torsten Klengel, Kristina B Mercer, Bekh Bradley, Karen N Conneely, Kerry J Ressler, Elisabeth B Binder. Am J Med Genet B Neuropsychiatr Genet 2015
176
42

Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood.
Matthew N Davies, Manuela Volta, Ruth Pidsley, Katie Lunnon, Abhishek Dixit, Simon Lovestone, Cristian Coarfa, R Alan Harris, Aleksandar Milosavljevic, Claire Troakes,[...]. Genome Biol 2012
438
19

Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array.
Roderick C Slieker, Steffan D Bos, Jelle J Goeman, Judith Vmg Bovée, Rudolf P Talens, Ruud van der Breggen, H Eka D Suchiman, Eric-Wubbo Lameijer, Hein Putter, Erik B van den Akker,[...]. Epigenetics Chromatin 2013
150
16

Epigenetic programming by maternal behavior.
Ian C G Weaver, Nadia Cervoni, Frances A Champagne, Ana C D'Alessio, Shakti Sharma, Jonathan R Seckl, Sergiy Dymov, Moshe Szyf, Michael J Meaney. Nat Neurosci 2004
16

Correlation of DNA methylation levels in blood and saliva DNA in young girls of the LEGACY Girls study.
Hui-Chen Wu, Qiao Wang, Wendy K Chung, Irene L Andrulis, Mary B Daly, Esther M John, Theresa H M Keegan, Julia Knight, Angela R Bradbury, Maya A Kappil,[...]. Epigenetics 2014
19
36

DNA methylation arrays as surrogate measures of cell mixture distribution.
Eugene Andres Houseman, William P Accomando, Devin C Koestler, Brock C Christensen, Carmen J Marsit, Heather H Nelson, John K Wiencke, Karl T Kelsey. BMC Bioinformatics 2012
14

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray.
Yi-an Chen, Mathieu Lemire, Sanaa Choufani, Darci T Butcher, Daria Grafodatskaya, Brent W Zanke, Steven Gallinger, Thomas J Hudson, Rosanna Weksberg. Epigenetics 2013
780
14

Aging effects on DNA methylation modules in human brain and blood tissue.
Steve Horvath, Yafeng Zhang, Peter Langfelder, René S Kahn, Marco P M Boks, Kristel van Eijk, Leonard H van den Berg, Roel A Ophoff. Genome Biol 2012
340
14

Prenatal exposure to maternal depression, neonatal methylation of human glucocorticoid receptor gene (NR3C1) and infant cortisol stress responses.
Tim F Oberlander, Joanne Weinberg, Michael Papsdorf, Ruth Grunau, Shaila Misri, Angela M Devlin. Epigenetics 2008
819
14

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Martin J Aryee, Andrew E Jaffe, Hector Corrada-Bravo, Christine Ladd-Acosta, Andrew P Feinberg, Kasper D Hansen, Rafael A Irizarry. Bioinformatics 2014
14


Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping.
Jean E Abraham, Mel J Maranian, Inmaculada Spiteri, Roslin Russell, Susan Ingle, Craig Luccarini, Helena M Earl, Paul P D Pharoah, Alison M Dunning, Carlos Caldas. BMC Med Genomics 2012
69
11

Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse.
Patrick O McGowan, Aya Sasaki, Ana C D'Alessio, Sergiy Dymov, Benoit Labonté, Moshe Szyf, Gustavo Turecki, Michael J Meaney. Nat Neurosci 2009
11

Buccals are likely to be a more informative surrogate tissue than blood for epigenome-wide association studies.
Robert Lowe, Carolina Gemma, Huriya Beyan, Mohammed I Hawa, Alexandra Bazeos, R David Leslie, Alexandre Montpetit, Vardhman K Rakyan, Sreeram V Ramagopalan. Epigenetics 2013
100
11

Buccal swabs but not mouthwash samples can be used to obtain pretransplant DNA fingerprints from recipients of allogeneic bone marrow transplants.
C Thiede, G Prange-Krex, J Freiberg-Richter, M Bornhäuser, G Ehninger. Bone Marrow Transplant 2000
106
11

Collection of blood, saliva, and buccal cell samples in a pilot study on the Danish nurse cohort: comparison of the response rate and quality of genomic DNA.
Thomas V O Hansen, Mette K Simonsen, Finn C Nielsen, Yrsa Andersen Hundrup. Cancer Epidemiol Biomarkers Prev 2007
130
11


Comprehensive DNA methylation analysis of human peripheral blood leukocytes and lymphoblastoid cell lines.
Hiroko Sugawara, Kazuya Iwamoto, Miki Bundo, Junko Ueda, Jun Ishigooka, Tadafumi Kato. Epigenetics 2011
36
13

Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility.
Lovisa E Reinius, Nathalie Acevedo, Maaike Joerink, Göran Pershagen, Sven-Erik Dahlén, Dario Greco, Cilla Söderhäll, Annika Scheynius, Juha Kere. PLoS One 2012
610
11

Behavioral epigenetics.
Barry M Lester, Edward Tronick, Eric Nestler, Ted Abel, Barry Kosofsky, Christopher W Kuzawa, Carmen J Marsit, Ian Maze, Michael J Meaney, Lisa M Monteggia,[...]. Ann N Y Acad Sci 2011
73
11

Dynamic changes in DNA methylation of stress-associated genes (OXTR, BDNF ) after acute psychosocial stress.
E Unternaehrer, P Luers, J Mill, E Dempster, A H Meyer, S Staehli, R Lieb, D H Hellhammer, G Meinlschmidt. Transl Psychiatry 2012
140
11

Whole-Genome Saliva and Blood DNA Methylation Profiling in Individuals with a Respiratory Allergy.
Sabine A S Langie, Katarzyna Szarc Vel Szic, Ken Declerck, Sophie Traen, Gudrun Koppen, Guy Van Camp, Greet Schoeters, Wim Vanden Berghe, Patrick De Boever. PLoS One 2016
25
20

Global and gene-specific DNA methylation across multiple tissues in early infancy: implications for children's health research.
David A Armstrong, Corina Lesseur, Elisabeth Conradt, Barry M Lester, Carmen J Marsit. FASEB J 2014
55
9

Blood-based profiles of DNA methylation predict the underlying distribution of cell types: a validation analysis.
Devin C Koestler, Brock Christensen, Margaret R Karagas, Carmen J Marsit, Scott M Langevin, Karl T Kelsey, John K Wiencke, E Andres Houseman. Epigenetics 2013
145
9

A data-driven approach to preprocessing Illumina 450K methylation array data.
Ruth Pidsley, Chloe C Y Wong, Manuela Volta, Katie Lunnon, Jonathan Mill, Leonard C Schalkwyk. BMC Genomics 2013
459
9

Heterogeneity in white blood cells has potential to confound DNA methylation measurements.
Bjorn T Adalsteinsson, Haukur Gudnason, Thor Aspelund, Tamara B Harris, Lenore J Launer, Gudny Eiriksdottir, Albert V Smith, Vilmundur Gudnason. PLoS One 2012
136
9


Beyond genotype: serotonin transporter epigenetic modification predicts human brain function.
Yuliya S Nikolova, Karestan C Koenen, Sandro Galea, Chiou-Miin Wang, Marianne L Seney, Etienne Sibille, Douglas E Williamson, Ahmad R Hariri. Nat Neurosci 2014
75
9

Determination of leucocyte subsets in human saliva by flow cytometry.
Anđelko Vidović, Danica Vidović Juras, Vanja Vučićević Boras, Josip Lukač, Mirjana Grubišić-Ilić, Davor Rak, Ante Sabioncello. Arch Oral Biol 2012
25
16

New saliva DNA collection method compared to buccal cell collection techniques for epidemiological studies.
Nikki L Rogers, Shelley A Cole, Hao-Chang Lan, Aldo Crossa, Ellen W Demerath. Am J Hum Biol 2007
103
9


DNA methylation analysis of multiple tissues from newborn twins reveals both genetic and intrauterine components to variation in the human neonatal epigenome.
Miina Ollikainen, Katherine R Smith, Eric Ji-Hoon Joo, Hong Kiat Ng, Roberta Andronikos, Boris Novakovic, Nur Khairunnisa Abdul Aziz, John B Carlin, Ruth Morley, Richard Saffery,[...]. Hum Mol Genet 2010
212
9

Not all biofluids are created equal: chewing over salivary diagnostics and the epigenome.
Michael E Wren, Elizabeth A Shirtcliff, Stacy S Drury. Clin Ther 2015
30
13

Maternal care as a model for experience-dependent chromatin plasticity?
Michael J Meaney, Moshe Szyf. Trends Neurosci 2005
344
9

Pain-related stress during the Neonatal Intensive Care Unit stay and SLC6A4 methylation in very preterm infants.
Livio Provenzi, Monica Fumagalli, Ida Sirgiovanni, Roberto Giorda, Uberto Pozzoli, Francesco Morandi, Silvana Beri, Giorgia Menozzi, Fabio Mosca, Renato Borgatti,[...]. Front Behav Neurosci 2015
41
9

How adversity gets under the skin.
Steven E Hyman. Nat Neurosci 2009
46
9

The Contributions of Maternal Sensitivity and Maternal Depressive Symptoms to Epigenetic Processes and Neuroendocrine Functioning.
Elisabeth Conradt, Katheleen Hawes, Dylan Guerin, David A Armstrong, Carmen J Marsit, Edward Tronick, Barry M Lester. Child Dev 2016
38
10

Epigenetic differences arise during the lifetime of monozygotic twins.
Mario F Fraga, Esteban Ballestar, Maria F Paz, Santiago Ropero, Fernando Setien, Maria L Ballestar, Damia Heine-Suñer, Juan C Cigudosa, Miguel Urioste, Javier Benitez,[...]. Proc Natl Acad Sci U S A 2005
9

Quality of DNA extracted from saliva samples collected with the Oragene™ DNA self-collection kit.
Ana P Nunes, Isabel O Oliveira, Betânia R Santos, Cristini Millech, Liziane P Silva, David A González, Pedro C Hallal, Ana M B Menezes, Cora L Araújo, Fernando C Barros. BMC Med Res Methodol 2012
40
10

Correspondence of DNA Methylation Between Blood and Brain Tissue and Its Application to Schizophrenia Research.
Esther Walton, Johanna Hass, Jingyu Liu, Joshua L Roffman, Fabio Bernardoni, Veit Roessner, Matthias Kirsch, Gabriele Schackert, Vince Calhoun, Stefan Ehrlich. Schizophr Bull 2016
133
9

Dynamic DNA methylation across diverse human cell lines and tissues.
Katherine E Varley, Jason Gertz, Kevin M Bowling, Stephanie L Parker, Timothy E Reddy, Florencia Pauli-Behn, Marie K Cross, Brian A Williams, John A Stamatoyannopoulos, Gregory E Crawford,[...]. Genome Res 2013
428
9

A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data.
Andrew E Teschendorff, Francesco Marabita, Matthias Lechner, Thomas Bartlett, Jesper Tegner, David Gomez-Cabrero, Stephan Beck. Bioinformatics 2013
705
7

DNA hypomethylation of MB-COMT promoter in the DNA derived from saliva in schizophrenia and bipolar disorder.
Shabnam Nohesara, Mohammad Ghadirivasfi, Sahar Mostafavi, Mohammad-Reza Eskandari, HamidReza Ahmadkhaniha, Sam Thiagalingam, Hamid Mostafavi Abdolmaleky. J Psychiatr Res 2011
107
7

Charting a dynamic DNA methylation landscape of the human genome.
Michael J Ziller, Hongcang Gu, Fabian Müller, Julie Donaghey, Linus T-Y Tsai, Oliver Kohlbacher, Philip L De Jager, Evan D Rosen, David A Bennett, Bradley E Bernstein,[...]. Nature 2013
748
7

From promises to practical strategies in epigenetic epidemiology.
Jonathan Mill, Bastiaan T Heijmans. Nat Rev Genet 2013
202
7

Epigenetic vestiges of early developmental adversity: childhood stress exposure and DNA methylation in adolescence.
Marilyn J Essex, W Thomas Boyce, Clyde Hertzman, Lucia L Lam, Jeffrey M Armstrong, Sarah M A Neumann, Michael S Kobor. Child Dev 2013
223
7

An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs).
Vardhman K Rakyan, Thomas A Down, Natalie P Thorne, Paul Flicek, Eugene Kulesha, Stefan Gräf, Eleni M Tomazou, Liselotte Bäckdahl, Nathan Johnson, Marlis Herberth,[...]. Genome Res 2008
270
7

Child abuse and epigenetic mechanisms of disease risk.
Bao-Zhu Yang, Huiping Zhang, Wenjing Ge, Natalie Weder, Heather Douglas-Palumberi, Francheska Perepletchikova, Joel Gelernter, Joan Kaufman. Am J Prev Med 2013
113
7

Hypomethylation of the serotonin receptor type-2A Gene (HTR2A) at T102C polymorphic site in DNA derived from the saliva of patients with schizophrenia and bipolar disorder.
Mohammad Ghadirivasfi, Shabnam Nohesara, Hamid-Reza Ahmadkhaniha, Mohammad-Reza Eskandari, Siavash Mostafavi, Sam Thiagalingam, Hamid Mostafavi Abdolmaleky. Am J Med Genet B Neuropsychiatr Genet 2011
75
7

Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue- and individual-specific DNA methylation patterns.
Hyang-Min Byun, Kimberly D Siegmund, Fei Pan, Daniel J Weisenberger, Gary Kanel, Peter W Laird, Allen S Yang. Hum Mol Genet 2009
181
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.