A citation-based method for searching scientific literature

Leilei Chen, Yan Li, Chi Ho Lin, Tim Hon Man Chan, Raymond Kwok Kei Chow, Yangyang Song, Ming Liu, Yun-Fei Yuan, Li Fu, Kar Lok Kong, Lihua Qi, Yan Li, Na Zhang, Amy Hin Yan Tong, Dora Lai-Wan Kwong, Kwan Man, Chung Mau Lo, Si Lok, Daniel G Tenen, Xin-Yuan Guan. Nat Med 2013
Times Cited: 285







List of co-cited articles
1047 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The Genomic Landscape and Clinical Relevance of A-to-I RNA Editing in Human Cancers.
Leng Han, Lixia Diao, Shuangxing Yu, Xiaoyan Xu, Jie Li, Rui Zhang, Yang Yang, Henrica M J Werner, A Karina Eterovic, Yuan Yuan,[...]. Cancer Cell 2015
233
50

Elevated RNA Editing Activity Is a Major Contributor to Transcriptomic Diversity in Tumors.
Nurit Paz-Yaacov, Lily Bazak, Ilana Buchumenski, Hagit T Porath, Miri Danan-Gotthold, Binyamin A Knisbacher, Eli Eisenberg, Erez Y Levanon. Cell Rep 2015
166
40

Dynamic landscape and regulation of RNA editing in mammals.
Meng How Tan, Qin Li, Raghuvaran Shanmugam, Robert Piskol, Jennefer Kohler, Amy N Young, Kaiwen Ivy Liu, Rui Zhang, Gokul Ramaswami, Kentaro Ariyoshi,[...]. Nature 2017
208
39

Adenosine-to-inosine RNA editing mediated by ADARs in esophageal squamous cell carcinoma.
Yan-Ru Qin, Jun-Jing Qiao, Tim Hon Man Chan, Ying-Hui Zhu, Fang-Fang Li, Haibo Liu, Jing Fei, Yan Li, Xin-Yuan Guan, Leilei Chen. Cancer Res 2014
97
34

RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself.
Brian J Liddicoat, Robert Piskol, Alistair M Chalk, Gokul Ramaswami, Miyoko Higuchi, Jochen C Hartner, Jin Billy Li, Peter H Seeburg, Carl R Walkley. Science 2015
338
32


Principles Governing A-to-I RNA Editing in the Breast Cancer Transcriptome.
Debora Fumagalli, David Gacquer, Françoise Rothé, Anne Lefort, Frederick Libert, David Brown, Naima Kheddoumi, Adam Shlien, Tomasz Konopka, Roberto Salgado,[...]. Cell Rep 2015
119
32

A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes.
Lily Bazak, Ami Haviv, Michal Barak, Jasmine Jacob-Hirsch, Patricia Deng, Rui Zhang, Farren J Isaacs, Gideon Rechavi, Jin Billy Li, Eli Eisenberg,[...]. Genome Res 2014
277
31

The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.
Niamh M Mannion, Sam M Greenwood, Robert Young, Sarah Cox, James Brindle, David Read, Christoffer Nellåker, Cornelia Vesely, Chris P Ponting, Paul J McLaughlin,[...]. Cell Rep 2014
283
31

RADAR: a rigorously annotated database of A-to-I RNA editing.
Gokul Ramaswami, Jin Billy Li. Nucleic Acids Res 2014
288
29

A-to-I editing of coding and non-coding RNAs by ADARs.
Kazuko Nishikura. Nat Rev Mol Cell Biol 2016
352
29

A-to-I RNA Editing Contributes to Proteomic Diversity in Cancer.
Xinxin Peng, Xiaoyan Xu, Yumeng Wang, David H Hawke, Shuangxing Yu, Leng Han, Zhicheng Zhou, Kamalika Mojumdar, Kang Jin Jeong, Marilyne Labrie,[...]. Cancer Cell 2018
64
43

Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.
M Higuchi, S Maas, F N Single, J Hartner, A Rozov, N Burnashev, D Feldmeyer, R Sprengel, P H Seeburg. Nature 2000
653
26

ADAR-Mediated RNA Editing Predicts Progression and Prognosis of Gastric Cancer.
Tim Hon Man Chan, Aditi Qamra, Kar Tong Tan, Jing Guo, Henry Yang, Lihua Qi, Jaymie Siqi Lin, Vanessa Hui En Ng, Yangyang Song, Huiqi Hong,[...]. Gastroenterology 2016
75
34

Loss of ADAR1 in tumours overcomes resistance to immune checkpoint blockade.
Jeffrey J Ishizuka, Robert T Manguso, Collins K Cheruiyot, Kevin Bi, Arpit Panda, Arvin Iracheta-Vellve, Brian C Miller, Peter P Du, Kathleen B Yates, Juan Dubrot,[...]. Nature 2019
169
26

Regulation of alternative splicing by RNA editing.
S M Rueter, T R Dawson, R B Emeson. Nature 1999
443
24

Altered adenosine-to-inosine RNA editing in human cancer.
Nurit Paz, Erez Y Levanon, Ninette Amariglio, Amy B Heimberger, Zvi Ram, Shlomi Constantini, Zohar S Barbash, Konstantin Adamsky, Michal Safran, Avi Hirschberg,[...]. Genome Res 2007
227
24

REDIportal: a comprehensive database of A-to-I RNA editing events in humans.
Ernesto Picardi, Anna Maria D'Erchia, Claudio Lo Giudice, Graziano Pesole. Nucleic Acids Res 2017
124
23

RNA editing in RHOQ promotes invasion potential in colorectal cancer.
Sae-Won Han, Hwang-Phill Kim, Jong-Yeon Shin, Eun-Goo Jeong, Won-Chul Lee, Keon Young Kim, Sang Youn Park, Dae-Won Lee, Jae-Kyung Won, Seung-Yong Jeong,[...]. J Exp Med 2014
55
41

Isoforms of RNA-Editing Enzyme ADAR1 Independently Control Nucleic Acid Sensor MDA5-Driven Autoimmunity and Multi-organ Development.
Kathleen Pestal, Cory C Funk, Jessica M Snyder, Nathan D Price, Piper M Treuting, Daniel B Stetson. Immunity 2015
190
23

A disrupted RNA editing balance mediated by ADARs (Adenosine DeAminases that act on RNA) in human hepatocellular carcinoma.
Tim Hon Man Chan, Chi Ho Lin, Lihua Qi, Jing Fei, Yan Li, Kol Jia Yong, Ming Liu, Yangyang Song, Raymond Kwok Kei Chow, Vanessa Hui En Ng,[...]. Gut 2014
121
23

ADAR1 promotes malignant progenitor reprogramming in chronic myeloid leukemia.
Qingfei Jiang, Leslie A Crews, Christian L Barrett, Hye-Jung Chun, Angela C Court, Jane M Isquith, Maria A Zipeto, Daniel J Goff, Mark Minden, Anil Sadarangani,[...]. Proc Natl Acad Sci U S A 2013
107
21

A-to-I RNA editing - immune protector and transcriptome diversifier.
Eli Eisenberg, Erez Y Levanon. Nat Rev Genet 2018
119
21

Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome.
Zhiyu Peng, Yanbing Cheng, Bertrand Chin-Ming Tan, Lin Kang, Zhijian Tian, Yuankun Zhu, Wenwei Zhang, Yu Liang, Xueda Hu, Xuemei Tan,[...]. Nat Biotechnol 2012
347
20

Liver disintegration in the mouse embryo caused by deficiency in the RNA-editing enzyme ADAR1.
Jochen C Hartner, Carolin Schmittwolf, Andreas Kispert, Albrecht M Müller, Miyoko Higuchi, Peter H Seeburg. J Biol Chem 2004
303
20

ADAR1 Activation Drives Leukemia Stem Cell Self-Renewal by Impairing Let-7 Biogenesis.
Maria Anna Zipeto, Angela C Court, Anil Sadarangani, Nathaniel P Delos Santos, Larisa Balaian, Hye-Jung Chun, Gabriel Pineda, Sheldon R Morris, Cayla N Mason, Ifat Geron,[...]. Cell Stem Cell 2016
103
20

The mRNA-edited form of GABRA3 suppresses GABRA3-mediated Akt activation and breast cancer metastasis.
Kiranmai Gumireddy, Anping Li, Andrew V Kossenkov, Masayuki Sakurai, Jinchun Yan, Yan Li, Hua Xu, Jian Wang, Paul J Zhang, Lin Zhang,[...]. Nat Commun 2016
59
33

Profiling RNA editing in human tissues: towards the inosinome Atlas.
Ernesto Picardi, Caterina Manzari, Francesca Mastropasqua, Italia Aiello, Anna Maria D'Erchia, Graziano Pesole. Sci Rep 2015
116
19

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
19

Human ADAR1 Prevents Endogenous RNA from Triggering Translational Shutdown.
Hachung Chung, Jorg J A Calis, Xianfang Wu, Tony Sun, Yingpu Yu, Stephanie L Sarbanes, Viet Loan Dao Thi, Abigail R Shilvock, H-Heinrich Hoffmann, Brad R Rosenberg,[...]. Cell 2018
154
19

Redirection of silencing targets by adenosine-to-inosine editing of miRNAs.
Yukio Kawahara, Boris Zinshteyn, Praveen Sethupathy, Hisashi Iizasa, Artemis G Hatzigeorgiou, Kazuko Nishikura. Science 2007
536
19

ADAR2 functions as a tumor suppressor via editing IGFBP7 in esophageal squamous cell carcinoma.
Yuan-Bin Chen, Xiao-Yu Liao, Jiang-Bo Zhang, Fang Wang, Hai-De Qin, Lanjun Zhang, Yin Yao Shugart, Yi-Xin Zeng, Wei-Hua Jia. Int J Oncol 2017
39
48

RNA editing by adenosine deaminases that act on RNA.
Brenda L Bass. Annu Rev Biochem 2002
857
18

Identifying RNA editing sites using RNA sequencing data alone.
Gokul Ramaswami, Rui Zhang, Robert Piskol, Liam P Keegan, Patricia Deng, Mary A O'Connell, Jin Billy Li. Nat Methods 2013
222
18

Systematic characterization of A-to-I RNA editing hotspots in microRNAs across human cancers.
Yumeng Wang, Xiaoyan Xu, Shuangxing Yu, Kang Jin Jeong, Zhicheng Zhou, Leng Han, Yiu Huen Tsang, Jun Li, Hu Chen, Lingegowda S Mangala,[...]. Genome Res 2017
81
22

AZIN1 RNA editing confers cancer stemness and enhances oncogenic potential in colorectal cancer.
Kunitoshi Shigeyasu, Yoshinaga Okugawa, Shusuke Toden, Jinsei Miyoshi, Yuji Toiyama, Takeshi Nagasaka, Naoki Takahashi, Masato Kusunoki, Tetsuji Takayama, Yasuhide Yamada,[...]. JCI Insight 2018
28
64

ADAR1 is essential for the maintenance of hematopoiesis and suppression of interferon signaling.
Jochen C Hartner, Carl R Walkley, Jun Lu, Stuart H Orkin. Nat Immunol 2009
285
18

Underediting of glutamate receptor GluR-B mRNA in malignant gliomas.
S Maas, S Patt, M Schrey, A Rich. Proc Natl Acad Sci U S A 2001
275
18

Mutations in ADAR1 cause Aicardi-Goutières syndrome associated with a type I interferon signature.
Gillian I Rice, Paul R Kasher, Gabriella M A Forte, Niamh M Mannion, Sam M Greenwood, Marcin Szynkiewicz, Jonathan E Dickerson, Sanjeev S Bhaskar, Massimiliano Zampini, Tracy A Briggs,[...]. Nat Genet 2012
431
18

Modulation of microRNA editing, expression and processing by ADAR2 deaminase in glioblastoma.
Sara Tomaselli, Federica Galeano, Shahar Alon, Susanna Raho, Silvia Galardi, Vinicia Assunta Polito, Carlo Presutti, Sara Vincenti, Eli Eisenberg, Franco Locatelli,[...]. Genome Biol 2015
88
19

Accurate identification of human Alu and non-Alu RNA editing sites.
Gokul Ramaswami, Wei Lin, Robert Piskol, Meng How Tan, Carrie Davis, Jin Billy Li. Nat Methods 2012
234
17


A genome-wide map of hyper-edited RNA reveals numerous new sites.
Hagit T Porath, Shai Carmi, Erez Y Levanon. Nat Commun 2014
114
16

Mammalian conserved ADAR targets comprise only a small fragment of the human editosome.
Yishay Pinto, Haim Y Cohen, Erez Y Levanon. Genome Biol 2014
115
16

Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells.
Hugh S Gannon, Tao Zou, Michael K Kiessling, Galen F Gao, Diana Cai, Peter S Choi, Alexandru P Ivan, Ilana Buchumenski, Ashton C Berger, Jonathan T Goldstein,[...]. Nat Commun 2018
61
26

Reduced adenosine-to-inosine miR-455-5p editing promotes melanoma growth and metastasis.
Einav Shoshan, Aaron K Mobley, Russell R Braeuer, Takafumi Kamiya, Li Huang, Mayra E Vasquez, Ahmad Salameh, Ho Jeong Lee, Sun Jin Kim, Cristina Ivan,[...]. Nat Cell Biol 2015
135
16

Systematic identification of abundant A-to-I editing sites in the human transcriptome.
Erez Y Levanon, Eli Eisenberg, Rodrigo Yelin, Sergey Nemzer, Martina Hallegger, Ronen Shemesh, Zipora Y Fligelman, Avi Shoshan, Sarah R Pollock, Dan Sztybel,[...]. Nat Biotechnol 2004
551
15


Modulation of microRNA processing and expression through RNA editing by ADAR deaminases.
Weidong Yang, Thimmaiah P Chendrimada, Qingde Wang, Miyoko Higuchi, Peter H Seeburg, Ramin Shiekhattar, Kazuko Nishikura. Nat Struct Mol Biol 2006
532
15

Stress-induced apoptosis associated with null mutation of ADAR1 RNA editing deaminase gene.
Qingde Wang, Mana Miyakoda, Weidong Yang, Jaspal Khillan, David L Stachura, Mitchell J Weiss, Kazuko Nishikura. J Biol Chem 2004
318
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.