A citation-based method for searching scientific literature

Dongfeng Chen, Shuchao Pang, Xungang Feng, Wenhui Huang, Robert G Hawley, Bo Yan. Neurosci Lett 2013
Times Cited: 30







List of co-cited articles
513 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A novel and functional variant within the ATG5 gene promoter in sporadic Parkinson's disease.
Dongfeng Chen, Cuiping Zhu, Xuenan Wang, Xungang Feng, Shuchao Pang, Wenhui Huang, Robert G Hawley, Bo Yan. Neurosci Lett 2013
31
43

Loss of autophagy in the central nervous system causes neurodegeneration in mice.
Masaaki Komatsu, Satoshi Waguri, Tomoki Chiba, Shigeo Murata, Jun-ichi Iwata, Isei Tanida, Takashi Ueno, Masato Koike, Yasuo Uchiyama, Eiki Kominami,[...]. Nature 2006
36

The Atg12-Atg5 conjugate has a novel E3-like activity for protein lipidation in autophagy.
Takao Hanada, Nobuo N Noda, Yoshinori Satomi, Yoshinobu Ichimura, Yuko Fujioka, Toshifumi Takao, Fuyuhiko Inagaki, Yoshinori Ohsumi. J Biol Chem 2007
759
30

The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy.
Naonobu Fujita, Takashi Itoh, Hiroko Omori, Mitsunori Fukuda, Takeshi Noda, Tamotsu Yoshimori. Mol Biol Cell 2008
719
26

Age at onset in Huntington's disease is modified by the autophagy pathway: implication of the V471A polymorphism in Atg7.
Silke Metzger, Meiju Saukko, Hong Van Che, Liang Tong, Yvonne Puder, Olaf Riess, Huu Phuc Nguyen. Hum Genet 2010
64
26

Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice.
Taichi Hara, Kenji Nakamura, Makoto Matsui, Akitsugu Yamamoto, Yohko Nakahara, Rika Suzuki-Migishima, Minesuke Yokoyama, Kenji Mishima, Ichiro Saito, Hideyuki Okano,[...]. Nature 2006
26

Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice.
Masaaki Komatsu, Satoshi Waguri, Takashi Ueno, Junichi Iwata, Shigeo Murata, Isei Tanida, Junji Ezaki, Noboru Mizushima, Yoshinori Ohsumi, Yasuo Uchiyama,[...]. J Cell Biol 2005
23

A ubiquitin-like system mediates protein lipidation.
Y Ichimura, T Kirisako, T Takao, Y Satomi, Y Shimonishi, N Ishihara, N Mizushima, I Tanida, E Kominami, M Ohsumi,[...]. Nature 2000
20

A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1.
Jochen Hampe, Andre Franke, Philip Rosenstiel, Andreas Till, Markus Teuber, Klaus Huse, Mario Albrecht, Gabriele Mayr, Francisco M De La Vega, Jason Briggs,[...]. Nat Genet 2007
20

The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
20

Network organization of the human autophagy system.
Christian Behrends, Mathew E Sowa, Steven P Gygi, J Wade Harper. Nature 2010
20


Autophagy: renovation of cells and tissues.
Noboru Mizushima, Masaaki Komatsu. Cell 2011
20

The V471A polymorphism in autophagy-related gene ATG7 modifies age at onset specifically in Italian Huntington disease patients.
Silke Metzger, Carolin Walter, Olaf Riess, Raymund A C Roos, Jørgen E Nielsen, David Craufurd, Huu Phuc Nguyen. PLoS One 2013
36
20

Disrupted autophagy leads to dopaminergic axon and dendrite degeneration and promotes presynaptic accumulation of α-synuclein and LRRK2 in the brain.
Lauren G Friedman, M Lenard Lachenmayer, Jing Wang, Liqiang He, Shibu M Poulose, Masaaki Komatsu, Gay R Holstein, Zhenyu Yue. J Neurosci 2012
195
20

Mutation in ATG5 reduces autophagy and leads to ataxia with developmental delay.
Myungjin Kim, Erin Sandford, Damian Gatica, Yu Qiu, Xu Liu, Yumei Zheng, Brenda A Schulman, Jishu Xu, Ian Semple, Seung-Hyun Ro,[...]. Elife 2016
109
20


The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
20

De novo mutations in the autophagy gene WDR45 cause static encephalopathy of childhood with neurodegeneration in adulthood.
Hirotomo Saitsu, Taki Nishimura, Kazuhiro Muramatsu, Hirofumi Kodera, Satoko Kumada, Kenji Sugai, Emi Kasai-Yoshida, Noriko Sawaura, Hiroya Nishida, Ai Hoshino,[...]. Nat Genet 2013
312
16

A protein conjugation system essential for autophagy.
N Mizushima, T Noda, T Yoshimori, Y Tanaka, T Ishii, M D George, D J Klionsky, M Ohsumi, Y Ohsumi. Nature 1998
16

Autophagy-deficient mice develop multiple liver tumors.
Akito Takamura, Masaaki Komatsu, Taichi Hara, Ayako Sakamoto, Chieko Kishi, Satoshi Waguri, Yoshinobu Eishi, Okio Hino, Keiji Tanaka, Noboru Mizushima. Genes Dev 2011
873
16

Autophagy regulates lipid metabolism.
Rajat Singh, Susmita Kaushik, Yongjun Wang, Youqing Xiang, Inna Novak, Masaaki Komatsu, Keiji Tanaka, Ana Maria Cuervo, Mark J Czaja. Nature 2009
16


LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
Y Kabeya, N Mizushima, T Ueno, A Yamamoto, T Kirisako, T Noda, E Kominami, Y Ohsumi, T Yoshimori. EMBO J 2000
16

Atg8 controls phagophore expansion during autophagosome formation.
Zhiping Xie, Usha Nair, Daniel J Klionsky. Mol Biol Cell 2008
486
16


Domain-specific mutations in sequestosome 1 (SQSTM1) cause familial and sporadic Paget's disease.
Lynne J Hocking, Gavin J A Lucas, Anna Daroszewska, Jon Mangion, Mark Olavesen, Tim Cundy, Geoff C Nicholson, Lynley Ward, Simon T Bennett, Wim Wuyts,[...]. Hum Mol Genet 2002
252
16

Discovery of Atg5/Atg7-independent alternative macroautophagy.
Yuya Nishida, Satoko Arakawa, Kenji Fujitani, Hirofumi Yamaguchi, Takeshi Mizuta, Toku Kanaseki, Masaaki Komatsu, Kinya Otsu, Yoshihide Tsujimoto, Shigeomi Shimizu. Nature 2009
801
16

Identification of a novel 21bp-insertion variant within the LC3B gene promoter in sporadic Parkinson's disease.
Jing Xu, Yan Yang, Shuchao Pang, Wenhui Huang, Xianyun Qin, Robert G Hawley, Bo Yan. Transl Res 2013
5
100

WIPI2 links LC3 conjugation with PI3P, autophagosome formation, and pathogen clearance by recruiting Atg12-5-16L1.
Hannah C Dooley, Minoo Razi, Hannah E J Polson, Stephen E Girardin, Michael I Wilson, Sharon A Tooze. Mol Cell 2014
450
16

Novel and functional ATG12 gene variants in sporadic Parkinson's disease.
Yuequn Li, Jian Huang, Shuchao Pang, Haihua Wang, Aimei Zhang, Robert G Hawley, Bo Yan. Neurosci Lett 2017
11
45

Molecular definitions of autophagy and related processes.
Lorenzo Galluzzi, Eric H Baehrecke, Andrea Ballabio, Patricia Boya, José Manuel Bravo-San Pedro, Francesco Cecconi, Augustine M Choi, Charleen T Chu, Patrice Codogno, Maria Isabel Colombo,[...]. EMBO J 2017
846
16

Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production.
Tatsuya Saitoh, Naonobu Fujita, Myoung Ho Jang, Satoshi Uematsu, Bo-Gie Yang, Takashi Satoh, Hiroko Omori, Takeshi Noda, Naoki Yamamoto, Masaaki Komatsu,[...]. Nature 2008
13

Autophagy modulation as a potential therapeutic target for diverse diseases.
David C Rubinsztein, Patrice Codogno, Beth Levine. Nat Rev Drug Discov 2012
13

Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum.
Elizabeth L Axe, Simon A Walker, Maria Manifava, Priya Chandra, H Llewelyn Roderick, Anja Habermann, Gareth Griffiths, Nicholas T Ktistakis. J Cell Biol 2008
13

Genetic variation in the autophagy gene ULK1 and risk of Crohn's disease.
Liesbet Henckaerts, Isabelle Cleynen, Marko Brinar, Jestinah Mahachie John, Kristel Van Steen, Paul Rutgeerts, Séverine Vermeire. Inflamm Bowel Dis 2011
108
13

Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth.
Philipp Wild, Hesso Farhan, David G McEwan, Sebastian Wagner, Vladimir V Rogov, Nathan R Brady, Benjamin Richter, Jelena Korac, Oliver Waidmann, Chunaram Choudhary,[...]. Science 2011
892
13

ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase.
Ryan C Russell, Ye Tian, Haixin Yuan, Hyun Woo Park, Yu-Yun Chang, Joungmok Kim, Haerin Kim, Thomas P Neufeld, Andrew Dillin, Kun-Liang Guan. Nat Cell Biol 2013
960
13

The Cvt pathway as a model for selective autophagy.
Melinda A Lynch-Day, Daniel J Klionsky. FEBS Lett 2010
208
13

The role of autophagy during the early neonatal starvation period.
Akiko Kuma, Masahiko Hatano, Makoto Matsui, Akitsugu Yamamoto, Haruaki Nakaya, Tamotsu Yoshimori, Yoshinori Ohsumi, Takeshi Tokuhisa, Noboru Mizushima. Nature 2004
13

A common role for Atg16L1, Atg5 and Atg7 in small intestinal Paneth cells and Crohn disease.
Ken Cadwell, Khushbu K Patel, Masaaki Komatsu, Herbert W Virgin, Thaddeus S Stappenbeck. Autophagy 2009
147
13

Autophagy is essential for preimplantation development of mouse embryos.
Satoshi Tsukamoto, Akiko Kuma, Mirei Murakami, Chieko Kishi, Akitsugu Yamamoto, Noboru Mizushima. Science 2008
396
13

Mechanism and functions of membrane binding by the Atg5-Atg12/Atg16 complex during autophagosome formation.
Julia Romanov, Marta Walczak, Iosune Ibiricu, Stefan Schüchner, Egon Ogris, Claudine Kraft, Sascha Martens. EMBO J 2012
275
13

Autophagy in immunity and inflammation.
Beth Levine, Noboru Mizushima, Herbert W Virgin. Nature 2011
13

Beclin 1 gene transfer activates autophagy and ameliorates the neurodegenerative pathology in alpha-synuclein models of Parkinson's and Lewy body diseases.
Brian Spencer, Rewati Potkar, Margarita Trejo, Edward Rockenstein, Christina Patrick, Ryan Gindi, Anthony Adame, Tony Wyss-Coray, Eliezer Masliah. J Neurosci 2009
444
13

Formation process of autophagosome is traced with Apg8/Aut7p in yeast.
T Kirisako, M Baba, N Ishihara, K Miyazawa, M Ohsumi, T Yoshimori, T Noda, Y Ohsumi. J Cell Biol 1999
691
13


Architecture of the Atg17 complex as a scaffold for autophagosome biogenesis.
Michael J Ragusa, Robin E Stanley, James H Hurley. Cell 2012
166
13

The class III PI(3)K Vps34 promotes autophagy and endocytosis but not TOR signaling in Drosophila.
Gábor Juhász, Jahda H Hill, Ying Yan, Miklós Sass, Eric H Baehrecke, Jonathan M Backer, Thomas P Neufeld. J Cell Biol 2008
257
13

Mutations in the parkin gene cause autosomal recessive juvenile parkinsonism.
T Kitada, S Asakawa, N Hattori, H Matsumine, Y Yamamura, S Minoshima, M Yokochi, Y Mizuno, N Shimizu. Nature 1998
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.