A citation-based method for searching scientific literature

Jonathan S Marvin, Bart G Borghuis, Lin Tian, Joseph Cichon, Mark T Harnett, Jasper Akerboom, Andrew Gordus, Sabine L Renninger, Tsai-Wen Chen, Cornelia I Bargmann, Michael B Orger, Eric R Schreiter, Jonathan B Demb, Wen-Biao Gan, S Andrew Hires, Loren L Looger. Nat Methods 2013
Times Cited: 447







List of co-cited articles
884 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors.
Tommaso Patriarchi, Jounhong Ryan Cho, Katharina Merten, Mark W Howe, Aaron Marley, Wei-Hong Xiong, Robert W Folk, Gerard Joey Broussard, Ruqiang Liang, Min Jee Jang,[...]. Science 2018
263
26

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
23

Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.
Jonathan S Marvin, Benjamin Scholl, Daniel E Wilson, Kaspar Podgorski, Abbas Kazemipour, Johannes Alexander Müller, Susanne Schoch, Francisco José Urra Quiroz, Nelson Rebola, Huan Bao,[...]. Nat Methods 2018
107
22

A Genetically Encoded Fluorescent Sensor Enables Rapid and Specific Detection of Dopamine in Flies, Fish, and Mice.
Fangmiao Sun, Jianzhi Zeng, Miao Jing, Jingheng Zhou, Jiesi Feng, Scott F Owen, Yichen Luo, Funing Li, Huan Wang, Takashi Yamaguchi,[...]. Cell 2018
206
22

A genetically encoded fluorescent sensor for in vivo imaging of GABA.
Jonathan S Marvin, Yoshiteru Shimoda, Vincent Magloire, Marco Leite, Takashi Kawashima, Thomas P Jensen, Ilya Kolb, Erika L Knott, Ondrej Novak, Kaspar Podgorski,[...]. Nat Methods 2019
85
23

A genetically encoded fluorescent acetylcholine indicator for in vitro and in vivo studies.
Miao Jing, Peng Zhang, Guangfu Wang, Jiesi Feng, Lukas Mesik, Jianzhi Zeng, Huoqing Jiang, Shaohua Wang, Jess C Looby, Nick A Guagliardo,[...]. Nat Biotechnol 2018
118
17

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
365
17

A Genetically Encoded Fluorescent Sensor for Rapid and Specific In Vivo Detection of Norepinephrine.
Jiesi Feng, Changmei Zhang, Julieta E Lischinsky, Miao Jing, Jingheng Zhou, Huan Wang, Yajun Zhang, Ao Dong, Zhaofa Wu, Hao Wu,[...]. Neuron 2019
96
15


High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
199
12

Ultrafast glutamate sensors resolve high-frequency release at Schaffer collateral synapses.
Nordine Helassa, Céline D Dürst, Catherine Coates, Silke Kerruth, Urwa Arif, Christian Schulze, J Simon Wiegert, Michael Geeves, Thomas G Oertner, Katalin Török. Proc Natl Acad Sci U S A 2018
54
18

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
10

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
268
10

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
473
10

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B Orger, Kristen E Severi, John J Macklin,[...]. Front Mol Neurosci 2013
390
9

An expanded palette of genetically encoded Ca²⁺ indicators.
Yongxin Zhao, Satoko Araki, Jiahui Wu, Takayuki Teramoto, Yu-Fen Chang, Masahiro Nakano, Ahmed S Abdelfattah, Manabi Fujiwara, Takeshi Ishihara, Takeharu Nagai,[...]. Science 2011
742
9

Genetically Encoded Glutamate Indicators with Altered Color and Topology.
Jiahui Wu, Ahmed S Abdelfattah, Hang Zhou, Araya Ruangkittisakul, Yong Qian, Klaus Ballanyi, Robert E Campbell. ACS Chem Biol 2018
29
31

Next-generation GRAB sensors for monitoring dopaminergic activity in vivo.
Fangmiao Sun, Jingheng Zhou, Bing Dai, Tongrui Qian, Jianzhi Zeng, Xuelin Li, Yizhou Zhuo, Yajun Zhang, Yipan Wang, Cheng Qian,[...]. Nat Methods 2020
33
27

Glutamate Clearance Is Locally Modulated by Presynaptic Neuronal Activity in the Cerebral Cortex.
Moritz Armbruster, Elizabeth Hanson, Chris G Dulla. J Neurosci 2016
60
13

Optimization of a GCaMP calcium indicator for neural activity imaging.
Jasper Akerboom, Tsai-Wen Chen, Trevor J Wardill, Lin Tian, Jonathan S Marvin, Sevinç Mutlu, Nicole Carreras Calderón, Federico Esposti, Bart G Borghuis, Xiaonan Richard Sun,[...]. J Neurosci 2012
707
8

Rational Engineering of XCaMPs, a Multicolor GECI Suite for In Vivo Imaging of Complex Brain Circuit Dynamics.
Masatoshi Inoue, Atsuya Takeuchi, Satoshi Manita, Shin-Ichiro Horigane, Masayuki Sakamoto, Ryosuke Kawakami, Kazushi Yamaguchi, Kouhei Otomo, Hiroyuki Yokoyama, Ryang Kim,[...]. Cell 2019
69
11

An expanded palette of dopamine sensors for multiplex imaging in vivo.
Tommaso Patriarchi, Ali Mohebi, Junqing Sun, Aaron Marley, Ruqiang Liang, Chunyang Dong, Kyle Puhger, Grace Or Mizuno, Carolyn M Davis, Brian Wiltgen,[...]. Nat Methods 2020
23
34

Detection of glutamate release from neurons by genetically encoded surface-displayed FRET nanosensors.
Sakiko Okumoto, Loren L Looger, Kristina D Micheva, Richard J Reimer, Stephen J Smith, Wolf B Frommer. Proc Natl Acad Sci U S A 2005
231
7

Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
438
7

Resolution of High-Frequency Mesoscale Intracortical Maps Using the Genetically Encoded Glutamate Sensor iGluSnFR.
Yicheng Xie, Allen W Chan, Alexander McGirr, Songchao Xue, Dongsheng Xiao, Hongkui Zeng, Timothy H Murphy. J Neurosci 2016
49
14

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.
Ahmed S Abdelfattah, Takashi Kawashima, Amrita Singh, Ondrej Novak, Hui Liu, Yichun Shuai, Yi-Chieh Huang, Luke Campagnola, Stephanie C Seeman, Jianing Yu,[...]. Science 2019
123
7

Conditional deletion of the glutamate transporter GLT-1 reveals that astrocytic GLT-1 protects against fatal epilepsy while neuronal GLT-1 contributes significantly to glutamate uptake into synaptosomes.
Geraldine T Petr, Yan Sun, Natalie M Frederick, Yun Zhou, Sameer C Dhamne, Mustafa Q Hameed, Clive Miranda, Edward A Bedoya, Kathryn D Fischer, Wencke Armsen,[...]. J Neurosci 2015
171
7

A genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP.
Mark A Lobas, Rongkun Tao, Jun Nagai, Mira T Kronschläger, Philip M Borden, Jonathan S Marvin, Loren L Looger, Baljit S Khakh. Nat Commun 2019
66
10

Kilohertz frame-rate two-photon tomography.
Abbas Kazemipour, Ondrej Novak, Daniel Flickinger, Jonathan S Marvin, Ahmed S Abdelfattah, Jonathan King, Philip M Borden, Jeong Jun Kim, Sarah H Al-Abdullatif, Parker E Deal,[...]. Nat Methods 2019
50
14

Circular permutation and receptor insertion within green fluorescent proteins.
G S Baird, D A Zacharias, R Y Tsien. Proc Natl Acad Sci U S A 1999
592
7


Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
6

DREADDs for Neuroscientists.
Bryan L Roth. Neuron 2016
574
6


Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
862
6

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
6

Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo.
Hod Dana, Tsai-Wen Chen, Amy Hu, Brenda C Shields, Caiying Guo, Loren L Looger, Douglas S Kim, Karel Svoboda. PLoS One 2014
212
6

Glutamate uptake.
N C Danbolt. Prog Neurobiol 2001
6

Ultrafast Two-Photon Imaging of a High-Gain Voltage Indicator in Awake Behaving Mice.
Vincent Villette, Mariya Chavarha, Ivan K Dimov, Jonathan Bradley, Lagnajeet Pradhan, Benjamin Mathieu, Stephen W Evans, Simon Chamberland, Dongqing Shi, Renzhi Yang,[...]. Cell 2019
67
8

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
375
6

Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin.
A Miyawaki, J Llopis, R Heim, J M McCaffery, J A Adams, M Ikura, R Y Tsien. Nature 1997
6

High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor.
Yiyang Gong, Cheng Huang, Jin Zhong Li, Benjamin F Grewe, Yanping Zhang, Stephan Eismann, Mark J Schnitzer. Science 2015
215
6

In vivo imaging of neural activity.
Weijian Yang, Rafael Yuste. Nat Methods 2017
157
6

Activity-dependent structural plasticity of perisynaptic astrocytic domains promotes excitatory synapse stability.
Yann Bernardinelli, Jerome Randall, Elia Janett, Irina Nikonenko, Stéphane König, Emma Victoria Jones, Carmen E Flores, Keith K Murai, Christian G Bochet, Anthony Holtmaat,[...]. Curr Biol 2014
171
6

Region- and Activity-Dependent Regulation of Extracellular Glutamate.
Nawrin F Pinky, Crystal M Wilkie, Jocelyn R Barnes, Matthew P Parsons. J Neurosci 2018
27
22

A genetically encoded, high-signal-to-noise maltose sensor.
Jonathan S Marvin, Eric R Schreiter, Ileabett M Echevarría, Loren L Looger. Proteins 2011
48
12

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
437
5

Genetic Dissection of Neural Circuits: A Decade of Progress.
Liqun Luo, Edward M Callaway, Karel Svoboda. Neuron 2018
132
5

Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
5

Imaging neural activity using Thy1-GCaMP transgenic mice.
Qian Chen, Joseph Cichon, Wenting Wang, Li Qiu, Seok-Jin R Lee, Nolan R Campbell, Nicholas Destefino, Michael J Goard, Zhanyan Fu, Ryohei Yasuda,[...]. Neuron 2012
129
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.