Jacqueline H Barlow, Robert B Faryabi, Elsa Callén, Nancy Wong, Amy Malhowski, Hua Tang Chen, Gustavo Gutierrez-Cruz, Hong-Wei Sun, Peter McKinnon, George Wright, Rafael Casellas, Davide F Robbiani, Louis Staudt, Oscar Fernandez-Capetillo, André Nussenzweig. Cell 2013
Times Cited: 262
Times Cited: 262
Times Cited
Times Co-cited
Similarity
Collisions between replication and transcription complexes cause common fragile site instability at the longest human genes.
Anne Helmrich, Monica Ballarino, Laszlo Tora. Mol Cell 2011
Anne Helmrich, Monica Ballarino, Laszlo Tora. Mol Cell 2011
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Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses.
Stephan Hamperl, Michael J Bocek, Joshua C Saldivar, Tomek Swigut, Karlene A Cimprich. Cell 2017
Stephan Hamperl, Michael J Bocek, Joshua C Saldivar, Tomek Swigut, Karlene A Cimprich. Cell 2017
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Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site.
Anne Letessier, Gaël A Millot, Stéphane Koundrioukoff, Anne-Marie Lachagès, Nicolas Vogt, R Scott Hansen, Bernard Malfoy, Olivier Brison, Michelle Debatisse. Nature 2011
Anne Letessier, Gaël A Millot, Stéphane Koundrioukoff, Anne-Marie Lachagès, Nicolas Vogt, R Scott Hansen, Bernard Malfoy, Olivier Brison, Michelle Debatisse. Nature 2011
24
Intragenic origins due to short G1 phases underlie oncogene-induced DNA replication stress.
Morgane Macheret, Thanos D Halazonetis. Nature 2018
Morgane Macheret, Thanos D Halazonetis. Nature 2018
22
Replication stress activates DNA repair synthesis in mitosis.
Sheroy Minocherhomji, Songmin Ying, Victoria A Bjerregaard, Sara Bursomanno, Aiste Aleliunaite, Wei Wu, Hocine W Mankouri, Huahao Shen, Ying Liu, Ian D Hickson. Nature 2015
Sheroy Minocherhomji, Songmin Ying, Victoria A Bjerregaard, Sara Bursomanno, Aiste Aleliunaite, Wei Wu, Hocine W Mankouri, Huahao Shen, Ying Liu, Ian D Hickson. Nature 2015
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Causes and consequences of replication stress.
Michelle K Zeman, Karlene A Cimprich. Nat Cell Biol 2014
Michelle K Zeman, Karlene A Cimprich. Nat Cell Biol 2014
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Fragile sites in cancer: more than meets the eye.
Thomas W Glover, Thomas E Wilson, Martin F Arlt. Nat Rev Cancer 2017
Thomas W Glover, Thomas E Wilson, Martin F Arlt. Nat Rev Cancer 2017
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Impairment of replication fork progression mediates RNA polII transcription-associated recombination.
Félix Prado, Andrés Aguilera. EMBO J 2005
Félix Prado, Andrés Aguilera. EMBO J 2005
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Common fragile site profiling in epithelial and erythroid cells reveals that most recurrent cancer deletions lie in fragile sites hosting large genes.
Benoît Le Tallec, Gaël Armel Millot, Marion Esther Blin, Olivier Brison, Bernard Dutrillaux, Michelle Debatisse. Cell Rep 2013
Benoît Le Tallec, Gaël Armel Millot, Marion Esther Blin, Olivier Brison, Bernard Dutrillaux, Michelle Debatisse. Cell Rep 2013
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Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals.
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
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Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse.
Anthony Tubbs, Sriram Sridharan, Niek van Wietmarschen, Yaakov Maman, Elsa Callen, Andre Stanlie, Wei Wu, Xia Wu, Amanda Day, Nancy Wong,[...]. Cell 2018
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FANCD2 Facilitates Replication through Common Fragile Sites.
Advaitha Madireddy, Settapong T Kosiyatrakul, Rebecca A Boisvert, Emilia Herrera-Moyano, María L García-Rubio, Jeannine Gerhardt, Elizabeth A Vuono, Nichole Owen, Zi Yan, Susan Olson,[...]. Mol Cell 2016
Advaitha Madireddy, Settapong T Kosiyatrakul, Rebecca A Boisvert, Emilia Herrera-Moyano, María L García-Rubio, Jeannine Gerhardt, Elizabeth A Vuono, Nichole Owen, Zi Yan, Susan Olson,[...]. Mol Cell 2016
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Large transcription units unify copy number variants and common fragile sites arising under replication stress.
Thomas E Wilson, Martin F Arlt, So Hae Park, Sountharia Rajendran, Michelle Paulsen, Mats Ljungman, Thomas W Glover. Genome Res 2015
Thomas E Wilson, Martin F Arlt, So Hae Park, Sountharia Rajendran, Michelle Paulsen, Mats Ljungman, Thomas W Glover. Genome Res 2015
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The Sequence Alignment/Map format and SAMtools.
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DNA polymerase alpha inhibition by aphidicolin induces gaps and breaks at common fragile sites in human chromosomes.
T W Glover, C Berger, J Coyle, B Echo. Hum Genet 1984
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RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.
Rahul Bhowmick, Sheroy Minocherhomji, Ian D Hickson. Mol Cell 2016
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Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription.
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15
Replication stress induces sister-chromatid bridging at fragile site loci in mitosis.
Kok Lung Chan, Timea Palmai-Pallag, Songmin Ying, Ian D Hickson. Nat Cell Biol 2009
Kok Lung Chan, Timea Palmai-Pallag, Songmin Ying, Ian D Hickson. Nat Cell Biol 2009
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Replication landscape of the human genome.
Nataliya Petryk, Malik Kahli, Yves d'Aubenton-Carafa, Yan Jaszczyszyn, Yimin Shen, Maud Silvain, Claude Thermes, Chun-Long Chen, Olivier Hyrien. Nat Commun 2016
Nataliya Petryk, Malik Kahli, Yves d'Aubenton-Carafa, Yan Jaszczyszyn, Yimin Shen, Maud Silvain, Claude Thermes, Chun-Long Chen, Olivier Hyrien. Nat Commun 2016
15
15
Transcription-dependent regulation of replication dynamics modulates genome stability.
Marion Blin, Benoît Le Tallec, Viola Nähse, Mélanie Schmidt, Caroline Brossas, Gael A Millot, Marie-Noëlle Prioleau, Michelle Debatisse. Nat Struct Mol Biol 2019
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Increased global transcription activity as a mechanism of replication stress in cancer.
Panagiotis Kotsantis, Lara Marques Silva, Sarah Irmscher, Rebecca M Jones, Lisa Folkes, Natalia Gromak, Eva Petermann. Nat Commun 2016
Panagiotis Kotsantis, Lara Marques Silva, Sarah Irmscher, Rebecca M Jones, Lisa Folkes, Natalia Gromak, Eva Petermann. Nat Commun 2016
14
Replication-Transcription Conflicts Generate R-Loops that Orchestrate Bacterial Stress Survival and Pathogenesis.
Kevin S Lang, Ashley N Hall, Christopher N Merrikh, Mark Ragheb, Hannah Tabakh, Alex J Pollock, Joshua J Woodward, Julia E Dreifus, Houra Merrikh. Cell 2017
Kevin S Lang, Ashley N Hall, Christopher N Merrikh, Mark Ragheb, Hannah Tabakh, Alex J Pollock, Joshua J Woodward, Julia E Dreifus, Houra Merrikh. Cell 2017
14
Failure of origin activation in response to fork stalling leads to chromosomal instability at fragile sites.
Efrat Ozeri-Galai, Ronald Lebofsky, Ayelet Rahat, Assaf C Bester, Aaron Bensimon, Batsheva Kerem. Mol Cell 2011
Efrat Ozeri-Galai, Ronald Lebofsky, Ayelet Rahat, Assaf C Bester, Aaron Bensimon, Batsheva Kerem. Mol Cell 2011
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Replication of a common fragile site, FRA3B, occurs late in S phase and is delayed further upon induction: implications for the mechanism of fragile site induction.
M M Le Beau, F V Rassool, M E Neilly, R Espinosa, T W Glover, D I Smith, T W McKeithan. Hum Mol Genet 1998
M M Le Beau, F V Rassool, M E Neilly, R Espinosa, T W Glover, D I Smith, T W McKeithan. Hum Mol Genet 1998
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R-loop-mediated genomic instability is caused by impairment of replication fork progression.
Wenjian Gan, Zhishuang Guan, Jie Liu, Ting Gui, Keng Shen, James L Manley, Xialu Li. Genes Dev 2011
Wenjian Gan, Zhishuang Guan, Jie Liu, Ting Gui, Keng Shen, James L Manley, Xialu Li. Genes Dev 2011
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Transcription-coupled nucleotide excision repair factors promote R-loop-induced genome instability.
Julie Sollier, Caroline Townsend Stork, María L García-Rubio, Renee D Paulsen, Andrés Aguilera, Karlene A Cimprich. Mol Cell 2014
Julie Sollier, Caroline Townsend Stork, María L García-Rubio, Renee D Paulsen, Andrés Aguilera, Karlene A Cimprich. Mol Cell 2014
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Molecular basis for expression of common and rare fragile sites.
Eitan Zlotorynski, Ayelet Rahat, Jennifer Skaug, Neta Ben-Porat, Efrat Ozeri, Ruth Hershberg, Ayala Levi, Stephen W Scherer, Hanah Margalit, Batsheva Kerem. Mol Cell Biol 2003
Eitan Zlotorynski, Ayelet Rahat, Jennifer Skaug, Neta Ben-Porat, Efrat Ozeri, Ruth Hershberg, Ayala Levi, Stephen W Scherer, Hanah Margalit, Batsheva Kerem. Mol Cell Biol 2003
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R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters.
Paul A Ginno, Paul L Lott, Holly C Christensen, Ian Korf, Frédéric Chédin. Mol Cell 2012
Paul A Ginno, Paul L Lott, Holly C Christensen, Ian Korf, Frédéric Chédin. Mol Cell 2012
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DNA replication stress as a hallmark of cancer.
Morgane Macheret, Thanos D Halazonetis. Annu Rev Pathol 2015
Morgane Macheret, Thanos D Halazonetis. Annu Rev Pathol 2015
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Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing.
Nicola Crosetto, Abhishek Mitra, Maria Joao Silva, Magda Bienko, Norbert Dojer, Qi Wang, Elif Karaca, Roberto Chiarle, Magdalena Skrzypczak, Krzysztof Ginalski,[...]. Nat Methods 2013
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Transcription-mediated organization of the replication initiation program across large genes sets common fragile sites genome-wide.
Olivier Brison, Sami El-Hilali, Dana Azar, Stéphane Koundrioukoff, Mélanie Schmidt, Viola Nähse, Yan Jaszczyszyn, Anne-Marie Lachages, Bernard Dutrillaux, Claude Thermes,[...]. Nat Commun 2019
Olivier Brison, Sami El-Hilali, Dana Azar, Stéphane Koundrioukoff, Mélanie Schmidt, Viola Nähse, Yan Jaszczyszyn, Anne-Marie Lachages, Bernard Dutrillaux, Claude Thermes,[...]. Nat Commun 2019
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R loops: new modulators of genome dynamics and function.
José M Santos-Pereira, Andrés Aguilera. Nat Rev Genet 2015
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An oncogene-induced DNA damage model for cancer development.
Thanos D Halazonetis, Vassilis G Gorgoulis, Jiri Bartek. Science 2008
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Sequencing newly replicated DNA reveals widespread plasticity in human replication timing.
R Scott Hansen, Sean Thomas, Richard Sandstrom, Theresa K Canfield, Robert E Thurman, Molly Weaver, Michael O Dorschner, Stanley M Gartler, John A Stamatoyannopoulos. Proc Natl Acad Sci U S A 2010
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Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae.
Anna Azvolinsky, Paul G Giresi, Jason D Lieb, Virginia A Zakian. Mol Cell 2009
Anna Azvolinsky, Paul G Giresi, Jason D Lieb, Virginia A Zakian. Mol Cell 2009
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GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination.
Paul A Ginno, Yoong Wearn Lim, Paul L Lott, Ian Korf, Frédéric Chédin. Genome Res 2013
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BEDTools: a flexible suite of utilities for comparing genomic features.
Aaron R Quinlan, Ira M Hall. Bioinformatics 2010
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DNA Breaks and End Resection Measured Genome-wide by End Sequencing.
Andres Canela, Sriram Sridharan, Nicholas Sciascia, Anthony Tubbs, Paul Meltzer, Barry P Sleckman, André Nussenzweig. Mol Cell 2016
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MUS81 promotes common fragile site expression.
Songmin Ying, Sheroy Minocherhomji, Kok Lung Chan, Timea Palmai-Pallag, Wai Kit Chu, Theresa Wass, Hocine W Mankouri, Ying Liu, Ian D Hickson. Nat Cell Biol 2013
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ATR regulates fragile site stability.
Anne M Casper, Paul Nghiem, Martin F Arlt, Thomas W Glover. Cell 2002
Anne M Casper, Paul Nghiem, Martin F Arlt, Thomas W Glover. Cell 2002
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Transcription shapes DNA replication initiation and termination in human cells.
Yu-Hung Chen, Sarah Keegan, Malik Kahli, Peter Tonzi, David Fenyö, Tony T Huang, Duncan J Smith. Nat Struct Mol Biol 2019
Yu-Hung Chen, Sarah Keegan, Malik Kahli, Peter Tonzi, David Fenyö, Tony T Huang, Duncan J Smith. Nat Struct Mol Biol 2019
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Long Neural Genes Harbor Recurrent DNA Break Clusters in Neural Stem/Progenitor Cells.
Pei-Chi Wei, Amelia N Chang, Jennifer Kao, Zhou Du, Robin M Meyers, Frederick W Alt, Bjoern Schwer. Cell 2016
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Increased replication initiation and conflicts with transcription underlie Cyclin E-induced replication stress.
R M Jones, O Mortusewicz, I Afzal, M Lorvellec, P García, T Helleday, E Petermann. Oncogene 2013
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Genome Organization Drives Chromosome Fragility.
Andres Canela, Yaakov Maman, Seolkyoung Jung, Nancy Wong, Elsa Callen, Amanda Day, Kyong-Rim Kieffer-Kwon, Aleksandra Pekowska, Hongliang Zhang, Suhas S P Rao,[...]. Cell 2017
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Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells.
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R-loops induce repressive chromatin marks over mammalian gene terminators.
Konstantina Skourti-Stathaki, Kinga Kamieniarz-Gdula, Nicholas J Proudfoot. Nature 2014
Konstantina Skourti-Stathaki, Kinga Kamieniarz-Gdula, Nicholas J Proudfoot. Nature 2014
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Mammalian RAD52 Functions in Break-Induced Replication Repair of Collapsed DNA Replication Forks.
Sotirios K Sotiriou, Irene Kamileri, Natalia Lugli, Konstantinos Evangelou, Caterina Da-Ré, Florian Huber, Laura Padayachy, Sebastien Tardy, Noemie L Nicati, Samia Barriot,[...]. Mol Cell 2016
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ERCC1 and MUS81-EME1 promote sister chromatid separation by processing late replication intermediates at common fragile sites during mitosis.
Valeria Naim, Therese Wilhelm, Michelle Debatisse, Filippo Rosselli. Nat Cell Biol 2013
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11
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.