A citation-based method for searching scientific literature

Maho Hamasaki, Nobumichi Furuta, Atsushi Matsuda, Akiko Nezu, Akitsugu Yamamoto, Naonobu Fujita, Hiroko Oomori, Takeshi Noda, Tokuko Haraguchi, Yasushi Hiraoka, Atsuo Amano, Tamotsu Yoshimori. Nature 2013
Times Cited: 1014







List of co-cited articles
2122 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mitofusin 2 tethers endoplasmic reticulum to mitochondria.
Olga Martins de Brito, Luca Scorrano. Nature 2008
25

ER tubules mark sites of mitochondrial division.
Jonathan R Friedman, Laura L Lackner, Matthew West, Jared R DiBenedetto, Jodi Nunnari, Gia K Voeltz. Science 2011
25

Mitochondria supply membranes for autophagosome biogenesis during starvation.
Dale W Hailey, Angelika S Rambold, Prasanna Satpute-Krishnan, Kasturi Mitra, Rachid Sougrat, Peter K Kim, Jennifer Lippincott-Schwartz. Cell 2010
915
19

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells.
Lei Liu, Du Feng, Guo Chen, Ming Chen, Qiaoxia Zheng, Pingping Song, Qi Ma, Chongzhuo Zhu, Rui Wang, Wanjun Qi,[...]. Nat Cell Biol 2012
788
16


Chaperone-mediated coupling of endoplasmic reticulum and mitochondrial Ca2+ channels.
György Szabadkai, Katiuscia Bianchi, Péter Várnai, Diego De Stefani, Mariusz R Wieckowski, Dario Cavagna, Anikó I Nagy, Tamás Balla, Rosario Rizzuto. J Cell Biol 2006
821
15

Structural and functional features and significance of the physical linkage between ER and mitochondria.
György Csordás, Christian Renken, Péter Várnai, Ludivine Walter, David Weaver, Karolyn F Buttle, Tamás Balla, Carmen A Mannella, György Hajnóczky. J Cell Biol 2006
850
15

Mitofusin 2 ablation increases endoplasmic reticulum-mitochondria coupling.
Riccardo Filadi, Elisa Greotti, Gabriele Turacchio, Alberto Luini, Tullio Pozzan, Paola Pizzo. Proc Natl Acad Sci U S A 2015
311
14

Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum.
Elizabeth L Axe, Simon A Walker, Maria Manifava, Priya Chandra, H Llewelyn Roderick, Anja Habermann, Gareth Griffiths, Nicholas T Ktistakis. J Cell Biol 2008
14

Plasma membrane contributes to the formation of pre-autophagosomal structures.
Brinda Ravikumar, Kevin Moreau, Luca Jahreiss, Claudia Puri, David C Rubinsztein. Nat Cell Biol 2010
600
14

Essential regulation of cell bioenergetics by constitutive InsP3 receptor Ca2+ transfer to mitochondria.
César Cárdenas, Russell A Miller, Ian Smith, Thi Bui, Jordi Molgó, Marioly Müller, Horia Vais, King-Ho Cheung, Jun Yang, Ian Parker,[...]. Cell 2010
679
13

The autophagosome: origins unknown, biogenesis complex.
Christopher A Lamb, Tamotsu Yoshimori, Sharon A Tooze. Nat Rev Mol Cell Biol 2013
819
13


Critical reappraisal confirms that Mitofusin 2 is an endoplasmic reticulum-mitochondria tether.
Deborah Naon, Marta Zaninello, Marta Giacomello, Tatiana Varanita, Francesca Grespi, Sowmya Lakshminaranayan, Annalisa Serafini, Martina Semenzato, Stephanie Herkenne, Maria Isabel Hernández-Alvarez,[...]. Proc Natl Acad Sci U S A 2016
256
12

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
12

Close contacts with the endoplasmic reticulum as determinants of mitochondrial Ca2+ responses.
R Rizzuto, P Pinton, W Carrington, F S Fay, K E Fogarty, L M Lifshitz, R A Tuft, T Pozzan. Science 1998
12


ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase.
Ryan C Russell, Ye Tian, Haixin Yuan, Hyun Woo Park, Yu-Yun Chang, Joungmok Kim, Haerin Kim, Thomas P Neufeld, Andrew Dillin, Kun-Liang Guan. Nat Cell Biol 2013
882
12



Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.
Derek Narendra, Atsushi Tanaka, Der-Fen Suen, Richard J Youle. J Cell Biol 2008
11

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
11

FUNDC1 regulates mitochondrial dynamics at the ER-mitochondrial contact site under hypoxic conditions.
Wenxian Wu, Chunxia Lin, Keng Wu, Lei Jiang, Xiaojing Wang, Wen Li, Haixia Zhuang, Xingliang Zhang, Hao Chen, Shupeng Li,[...]. EMBO J 2016
150
11

The coming of age of the mitochondria-ER contact: a matter of thickness.
M Giacomello, L Pellegrini. Cell Death Differ 2016
170
11

WIPI2 links LC3 conjugation with PI3P, autophagosome formation, and pathogen clearance by recruiting Atg12-5-16L1.
Hannah C Dooley, Minoo Razi, Hannah E J Polson, Stephen E Girardin, Michael I Wilson, Sharon A Tooze. Mol Cell 2014
406
11

PINK1 and BECN1 relocalize at mitochondria-associated membranes during mitophagy and promote ER-mitochondria tethering and autophagosome formation.
Vania Gelmetti, Priscilla De Rosa, Liliana Torosantucci, Elettra Sara Marini, Alessandra Romagnoli, Martina Di Rienzo, Giuseppe Arena, Domenico Vignone, Gian Maria Fimia, Enza Maria Valente. Autophagy 2017
145
10

ULK1 translocates to mitochondria and phosphorylates FUNDC1 to regulate mitophagy.
Wenxian Wu, Weili Tian, Zhe Hu, Guo Chen, Lei Huang, Wen Li, Xingli Zhang, Peng Xue, Changqian Zhou, Lei Liu,[...]. EMBO Rep 2014
267
10

Isolation of mitochondria-associated membranes and mitochondria from animal tissues and cells.
Mariusz R Wieckowski, Carlotta Giorgi, Magdalena Lebiedzinska, Jerzy Duszynski, Paolo Pinton. Nat Protoc 2009
488
10

ER-mitochondria contacts couple mtDNA synthesis with mitochondrial division in human cells.
Samantha C Lewis, Lauren F Uchiyama, Jodi Nunnari. Science 2016
272
10


The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
10

What is the advantage of a transient precursor in autophagosome biogenesis?
Nicholas T Ktistakis, Simon Andrews, Joshua Long. Autophagy 2011
468
10

Nutrient-dependent mTORC1 association with the ULK1-Atg13-FIP200 complex required for autophagy.
Nao Hosokawa, Taichi Hara, Takeshi Kaizuka, Chieko Kishi, Akito Takamura, Yutaka Miura, Shun-ichiro Iemura, Tohru Natsume, Kenji Takehana, Naoyuki Yamada,[...]. Mol Biol Cell 2009
10

Nix is a selective autophagy receptor for mitochondrial clearance.
Ivana Novak, Vladimir Kirkin, David G McEwan, Ji Zhang, Philipp Wild, Alexis Rozenknop, Vladimir Rogov, Frank Löhr, Doris Popovic, Angelo Occhipinti,[...]. EMBO Rep 2010
781
9

PINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1.
Sven Geisler, Kira M Holmström, Diana Skujat, Fabienne C Fiesel, Oliver C Rothfuss, Philipp J Kahle, Wolfdieter Springer. Nat Cell Biol 2010
9

Prohibitin 2 Is an Inner Mitochondrial Membrane Mitophagy Receptor.
Yongjie Wei, Wei-Chung Chiang, Rhea Sumpter, Prashant Mishra, Beth Levine. Cell 2017
335
9

Metabolism. AMP-activated protein kinase mediates mitochondrial fission in response to energy stress.
Erin Quan Toyama, Sébastien Herzig, Julien Courchet, Tommy L Lewis, Oliver C Losón, Kristina Hellberg, Nathan P Young, Hsiuchen Chen, Franck Polleux, David C Chan,[...]. Science 2016
511
9

Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy.
Daniel F Egan, David B Shackelford, Maria M Mihaylova, Sara Gelino, Rebecca A Kohnz, William Mair, Debbie S Vasquez, Aashish Joshi, Dana M Gwinn, Rebecca Taylor,[...]. Science 2011
9

Diverse autophagosome membrane sources coalesce in recycling endosomes.
Claudia Puri, Maurizio Renna, Carla F Bento, Kevin Moreau, David C Rubinsztein. Cell 2013
270
9

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Daniel J Klionsky, Kotb Abdelmohsen, Akihisa Abe, Md Joynal Abedin, Hagai Abeliovich, Abraham Acevedo Arozena, Hiroaki Adachi, Christopher M Adams, Peter D Adams, Khosrow Adeli,[...]. Autophagy 2016
9

A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation.
Mitsuko Hayashi-Nishino, Naonobu Fujita, Takeshi Noda, Akihito Yamaguchi, Tamotsu Yoshimori, Akitsugu Yamamoto. Nat Cell Biol 2009
716
9

Upregulated function of mitochondria-associated ER membranes in Alzheimer disease.
Estela Area-Gomez, Maria Del Carmen Lara Castillo, Marc D Tambini, Cristina Guardia-Laguarta, Ad J C de Groof, Moneek Madra, Junichi Ikenouchi, Masato Umeda, Thomas D Bird, Stephen L Sturley,[...]. EMBO J 2012
355
9

An actin-dependent step in mitochondrial fission mediated by the ER-associated formin INF2.
Farida Korobova, Vinay Ramabhadran, Henry N Higgs. Science 2013
435
9

The ER-Mitochondria Tethering Complex VAPB-PTPIP51 Regulates Autophagy.
Patricia Gomez-Suaga, Sebastien Paillusson, Radu Stoica, Wendy Noble, Diane P Hanger, Christopher C J Miller. Curr Biol 2017
168
9

Mitochondrial ER contacts are crucial for mitophagy in yeast.
Stefan Böckler, Benedikt Westermann. Dev Cell 2014
135
9

A role for mitochondria in NLRP3 inflammasome activation.
Rongbin Zhou, Amir S Yazdi, Philippe Menu, Jürg Tschopp. Nature 2011
9

PERK is required at the ER-mitochondrial contact sites to convey apoptosis after ROS-based ER stress.
T Verfaillie, N Rubio, A D Garg, G Bultynck, R Rizzuto, J-P Decuypere, J Piette, C Linehan, S Gupta, A Samali,[...]. Cell Death Differ 2012
408
9

Mitochondria as sensors and regulators of calcium signalling.
Rosario Rizzuto, Diego De Stefani, Anna Raffaello, Cristina Mammucari. Nat Rev Mol Cell Biol 2012
958
9

Essential role for Nix in autophagic maturation of erythroid cells.
Hector Sandoval, Perumal Thiagarajan, Swapan K Dasgupta, Armin Schumacher, Josef T Prchal, Min Chen, Jin Wang. Nature 2008
751
9

During autophagy mitochondria elongate, are spared from degradation and sustain cell viability.
Ligia C Gomes, Giulietta Di Benedetto, Luca Scorrano. Nat Cell Biol 2011
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.