A citation-based method for searching scientific literature

Jason M Weaver, Hongmei Yang, David Roumanes, F Eun-Hyung Lee, Hulin Wu, John J Treanor, Tim R Mosmann. PLoS One 2013
Times Cited: 18







List of co-cited articles
96 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Preexisting influenza-specific CD4+ T cells correlate with disease protection against influenza challenge in humans.
Tom M Wilkinson, Chris K F Li, Cecilia S C Chui, Arthur K Y Huang, Molly Perkins, Julia C Liebner, Rob Lambkin-Williams, Anthony Gilbert, John Oxford, Ben Nicholas,[...]. Nat Med 2012
620
55

Cellular immune correlates of protection against symptomatic pandemic influenza.
Saranya Sridhar, Shaima Begom, Alison Bermingham, Katja Hoschler, Walt Adamson, William Carman, Thomas Bean, Wendy Barclay, Jonathan J Deeks, Ajit Lalvani. Nat Med 2013
498
38

Multiple-cytokine-producing antiviral CD4 T cells are functionally superior to single-cytokine-producing cells.
Sunil Kannanganat, Chris Ibegbu, Lakshmi Chennareddi, Harriet L Robinson, Rama Rao Amara. J Virol 2007
231
27

Protein vaccines induce uncommitted IL-2-secreting human and mouse CD4 T cells, whereas infections induce more IFN-gamma-secreting cells.
Anagha A Divekar, Dietmar M W Zaiss, F Eun-Hyung Lee, Dacheng Liu, David J Topham, Alice J A M Sijts, Tim R Mosmann. J Immunol 2006
45
22

Central memory and effector memory T cell subsets: function, generation, and maintenance.
Federica Sallusto, Jens Geginat, Antonio Lanzavecchia. Annu Rev Immunol 2004
22

T-cell quality in memory and protection: implications for vaccine design.
Robert A Seder, Patricia A Darrah, Mario Roederer. Nat Rev Immunol 2008
22

Memory CD4 T cells in influenza.
Kyra D Zens, Donna L Farber. Curr Top Microbiol Immunol 2015
46
22

In vitro evidence that commercial influenza vaccines are not similar in their ability to activate human T cell responses.
Mary Dawn T Co, Laura Orphin, John Cruz, Pamela Pazoles, Karin M Green, James Potts, Anita M Leporati, Jenny Aurielle B Babon, James E Evans, Francis A Ennis,[...]. Vaccine 2009
40
16

T cell responses are better correlates of vaccine protection in the elderly.
Janet E McElhaney, Dongxu Xie, W David Hager, Mary Beth Barry, Yazhen Wang, Alison Kleppinger, Catherine Ewen, Kevin P Kane, R Chris Bleackley. J Immunol 2006
389
16


Human effector and memory CD8+ T cell responses to smallpox and yellow fever vaccines.
Joseph D Miller, Robbert G van der Most, Rama S Akondy, John T Glidewell, Sophia Albott, David Masopust, Kaja Murali-Krishna, Patryce L Mahar, Srilatha Edupuganti, Susan Lalor,[...]. Immunity 2008
404
16

CD4+ T-cell expansion predicts neutralizing antibody responses to monovalent, inactivated 2009 pandemic influenza A(H1N1) virus subtype H1N1 vaccine.
Jennifer L Nayak, Theresa F Fitzgerald, Katherine A Richards, Hongmei Yang, John J Treanor, Andrea J Sant. J Infect Dis 2013
65
16

Induction of ICOS+CXCR3+CXCR5+ TH cells correlates with antibody responses to influenza vaccination.
Salah-Eddine Bentebibel, Santiago Lopez, Gerlinde Obermoser, Nathalie Schmitt, Cynthia Mueller, Carson Harrod, Emilio Flano, Asuncion Mejias, Randy A Albrecht, Derek Blankenship,[...]. Sci Transl Med 2013
375
16

Memory CD4 T cells direct protective responses to influenza virus in the lungs through helper-independent mechanisms.
John R Teijaro, David Verhoeven, Carly A Page, Damian Turner, Donna L Farber. J Virol 2010
128
16

Multifunctional CD4 cells expressing gamma interferon and perforin mediate protection against lethal influenza virus infection.
Deborah M Brown, Sarah Lee, Maria de la Luz Garcia-Hernandez, Susan L Swain. J Virol 2012
150
16

Multifunctional TH1 cells define a correlate of vaccine-mediated protection against Leishmania major.
Patricia A Darrah, Dipti T Patel, Paula M De Luca, Ross W B Lindsay, Dylan F Davey, Barbara J Flynn, Søren T Hoff, Peter Andersen, Steven G Reed, Sheldon L Morris,[...]. Nat Med 2007
16

Memory T cells established by seasonal human influenza A infection cross-react with avian influenza A (H5N1) in healthy individuals.
Laurel Yong-Hwa Lee, Do Lien Anh Ha, Cameron Simmons, Menno D de Jong, Nguyen Van Vinh Chau, Reto Schumacher, Yan Chun Peng, Andrew J McMichael, Jeremy J Farrar, Geoffrey L Smith,[...]. J Clin Invest 2008
329
16

Influenza vaccines: T-cell responses deserve more attention.
Michael Schotsaert, Xavier Saelens, Geert Leroux-Roels. Expert Rev Vaccines 2012
33
16


Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population.
Jason A Greenbaum, Maya F Kotturi, Yohan Kim, Carla Oseroff, Kerrie Vaughan, Nima Salimi, Randi Vita, Julia Ponomarenko, Richard H Scheuermann, Alessandro Sette,[...]. Proc Natl Acad Sci U S A 2009
250
16

An adjuvanted pandemic influenza H1N1 vaccine provides early and long term protection in health care workers.
Abdullah S Madhun, Per Espen Akselsen, Haakon Sjursen, Gabriel Pedersen, Signe Svindland, Jane Kristin Nøstbakken, Mona Nilsen, Kristin Mohn, Asne Jul-Larsen, Ingrid Smith,[...]. Vaccine 2010
52
16

Longevity of B-cell and T-cell responses after live attenuated influenza vaccination in children.
Kristin G-I Mohn, Geir Bredholt, Karl A Brokstad, Rishi D Pathirana, Hans J Aarstad, Camilla Tøndel, Rebecca J Cox. J Infect Dis 2015
49
16


Natural T Cell-mediated Protection against Seasonal and Pandemic Influenza. Results of the Flu Watch Cohort Study.
Andrew C Hayward, Lili Wang, Nilu Goonetilleke, Ellen B Fragaszy, Alison Bermingham, Andrew Copas, Oliver Dukes, Elizabeth R C Millett, Irwin Nazareth, Jonathan S Nguyen-Van-Tam,[...]. Am J Respir Crit Care Med 2015
134
16

Epitope specific T-cell responses against influenza A in a healthy population.
Miloje Savic, Jennifer L Dembinski, Yohan Kim, Gro Tunheim, Rebecca J Cox, Fredrik Oftung, Bjoern Peters, Siri Mjaaland. Immunology 2016
29
16


CD4 T cell help is limiting and selective during the primary B cell response to influenza virus infection.
Shabnam Alam, Zackery A G Knowlden, Mark Y Sangster, Andrea J Sant. J Virol 2014
50
16

Multiparameter flow cytometric analysis of CD4 and CD8 T cell subsets in young and old people.
Sven Koch, Anis Larbi, Evelyna Derhovanessian, Dennis Ozcelik, Elissaveta Naumova, Graham Pawelec. Immun Ageing 2008
186
11

Cutting edge: Tissue-retentive lung memory CD4 T cells mediate optimal protection to respiratory virus infection.
John R Teijaro, Damian Turner, Quynh Pham, E John Wherry, Leo Lefrançois, Donna L Farber. J Immunol 2011
376
11

Memory CD4+ T cells protect against influenza through multiple synergizing mechanisms.
K Kai McKinstry, Tara M Strutt, Yi Kuang, Deborah M Brown, Stewert Sell, Richard W Dutton, Susan L Swain. J Clin Invest 2012
131
11

Increased T-bet is associated with senescence of influenza virus-specific CD8 T cells in aged humans.
Douglas V Dolfi, Kathleen D Mansfield, Antonio M Polley, Susan A Doyle, Gordon J Freeman, Hanspeter Pircher, Kenneth E Schmader, E John Wherry. J Leukoc Biol 2013
49
11


Ex vivo phenotype and frequency of influenza virus-specific CD4 memory T cells.
Michaela Lucas, Cheryl L Day, Jessica R Wyer, Sharon L Cunliffe, Andrew Loughry, Andrew J McMichael, Paul Klenerman. J Virol 2004
61
11

Elucidation of seventeen human peripheral blood B-cell subsets and quantification of the tetanus response using a density-based method for the automated identification of cell populations in multidimensional flow cytometry data.
Yu Qian, Chungwen Wei, F Eun-Hyung Lee, John Campbell, Jessica Halliley, Jamie A Lee, Jennifer Cai, Y Megan Kong, Eva Sadat, Elizabeth Thomson,[...]. Cytometry B Clin Cytom 2010
121
11

Critical assessment of automated flow cytometry data analysis techniques.
Nima Aghaeepour, Greg Finak, Holger Hoos, Tim R Mosmann, Ryan Brinkman, Raphael Gottardo, Richard H Scheuermann. Nat Methods 2013
272
11

flowClust: a Bioconductor package for automated gating of flow cytometry data.
Kenneth Lo, Florian Hahne, Ryan R Brinkman, Raphael Gottardo. BMC Bioinformatics 2009
95
11

SWIFT-scalable clustering for automated identification of rare cell populations in large, high-dimensional flow cytometry datasets, part 1: algorithm design.
Iftekhar Naim, Suprakash Datta, Jonathan Rebhahn, James S Cavenaugh, Tim R Mosmann, Gaurav Sharma. Cytometry A 2014
38
11

An 11-color flow cytometric assay for identifying, phenotyping, and assessing endocytic ability of peripheral blood dendritic cell subsets in a single platform.
Jyh-Chiang E Wang, James J Kobie, Li Zhang, Matthew Cochran, Tim R Mosmann, Christopher T Ritchlin, Sally A Quataert. J Immunol Methods 2009
25
11

Data reduction for spectral clustering to analyze high throughput flow cytometry data.
Habil Zare, Parisa Shooshtari, Arvind Gupta, Ryan R Brinkman. BMC Bioinformatics 2010
73
11

Merging mixture components for cell population identification in flow cytometry.
Greg Finak, Ali Bashashati, Ryan Brinkman, Raphaël Gottardo. Adv Bioinformatics 2009
62
11

A survey of flow cytometry data analysis methods.
Ali Bashashati, Ryan R Brinkman. Adv Bioinformatics 2009
55
11

Hierarchical modeling for rare event detection and cell subset alignment across flow cytometry samples.
Andrew Cron, Cécile Gouttefangeas, Jacob Frelinger, Lin Lin, Satwinder K Singh, Cedrik M Britten, Marij J P Welters, Sjoerd H van der Burg, Mike West, Cliburn Chan. PLoS Comput Biol 2013
41
11


Automated high-dimensional flow cytometric data analysis.
Saumyadipta Pyne, Xinli Hu, Kui Wang, Elizabeth Rossin, Tsung-I Lin, Lisa M Maier, Clare Baecher-Allan, Geoffrey J McLachlan, Pablo Tamayo, David A Hafler,[...]. Proc Natl Acad Sci U S A 2009
148
11

Rapid cell population identification in flow cytometry data.
Nima Aghaeepour, Radina Nikolic, Holger H Hoos, Ryan R Brinkman. Cytometry A 2011
103
11

Delayed clearance of viral load and marked cytokine activation in severe cases of pandemic H1N1 2009 influenza virus infection.
Kelvin K W To, Ivan F N Hung, Iris W S Li, Kar-Lung Lee, Chi-Kwan Koo, Wing-Wa Yan, Raymond Liu, Ka-Ying Ho, Kwok-Hong Chu, Chi-Leung Watt,[...]. Clin Infect Dis 2010
313
11

Th1 and Th17 hypercytokinemia as early host response signature in severe pandemic influenza.
Jesus F Bermejo-Martin, Raul Ortiz de Lejarazu, Tomas Pumarola, Jordi Rello, Raquel Almansa, Paula Ramírez, Ignacio Martin-Loeches, David Varillas, Maria C Gallegos, Carlos Serón,[...]. Crit Care 2009
256
11

Critical care services and 2009 H1N1 influenza in Australia and New Zealand.
Steven A R Webb, Ville Pettilä, Ian Seppelt, Rinaldo Bellomo, Michael Bailey, David J Cooper, Michelle Cretikos, Andrew R Davies, Simon Finfer, Peter W J Harrigan,[...]. N Engl J Med 2009
743
11

High levels of virus-specific CD4+ T cells predict severe pandemic influenza A virus infection.
Yan Zhao, Yong-Hong Zhang, Laura Denney, Duncan Young, Tim J Powell, Yan-Chun Peng, Ning Li, Hui-Ping Yan, Da-Yan Wang, Yue-Long Shu,[...]. Am J Respir Crit Care Med 2012
48
11

CXC chemokine receptor 5 expression defines follicular homing T cells with B cell helper function.
P Schaerli, K Willimann, A B Lang, M Lipp, P Loetscher, B Moser. J Exp Med 2000
839
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.