A citation-based method for searching scientific literature

Emma M Jenkinson, Atteeq U Rehman, Tom Walsh, Jill Clayton-Smith, Kwanghyuk Lee, Robert J Morell, Meghan C Drummond, Shaheen N Khan, Muhammad Asif Naeem, Bushra Rauf, Neil Billington, Julie M Schultz, Jill E Urquhart, Ming K Lee, Andrew Berry, Neil A Hanley, Sarju Mehta, Deirdre Cilliers, Peter E Clayton, Helen Kingston, Miriam J Smith, Thomas T Warner, Graeme C Black, Dorothy Trump, Julian R E Davis, Wasim Ahmad, Suzanne M Leal, Sheikh Riazuddin, Mary-Claire King, Thomas B Friedman, William G Newman. Am J Hum Genet 2013
Times Cited: 129







List of co-cited articles
1233 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Loss of mitochondrial peptidase Clpp leads to infertility, hearing loss plus growth retardation via accumulation of CLPX, mtDNA and inflammatory factors.
Suzana Gispert, Dajana Parganlija, Michael Klinkenberg, Stefan Dröse, Ilka Wittig, Michel Mittelbronn, Pawel Grzmil, Sebastian Koob, Andrea Hamann, Michael Walter,[...]. Hum Mol Genet 2013
102
46

CLPP coordinates mitoribosomal assembly through the regulation of ERAL1 levels.
Karolina Szczepanowska, Priyanka Maiti, Alexandra Kukat, Eduard Hofsetz, Hendrik Nolte, Katharina Senft, Christina Becker, Benedetta Ruzzenente, Hue-Tran Hornig-Do, Rolf Wibom,[...]. EMBO J 2016
78
42

Mutations in LARS2, encoding mitochondrial leucyl-tRNA synthetase, lead to premature ovarian failure and hearing loss in Perrault syndrome.
Sarah B Pierce, Ksenija Gersak, Rachel Michaelson-Cohen, Tom Walsh, Ming K Lee, Daniel Malach, Rachel E Klevit, Mary-Claire King, Ephrat Levy-Lahad. Am J Hum Genet 2013
125
31

Inhibition of the Mitochondrial Protease ClpP as a Therapeutic Strategy for Human Acute Myeloid Leukemia.
Alicia Cole, Zezhou Wang, Etienne Coyaud, Veronique Voisin, Marcela Gronda, Yulia Jitkova, Rachel Mattson, Rose Hurren, Sonja Babovic, Neil Maclean,[...]. Cancer Cell 2015
164
29

Mutations in Twinkle primase-helicase cause Perrault syndrome with neurologic features.
Hiroyuki Morino, Sarah B Pierce, Yukiko Matsuda, Tom Walsh, Ryosuke Ohsawa, Marta Newby, Keiko Hiraki-Kamon, Masahito Kuramochi, Ming K Lee, Rachel E Klevit,[...]. Neurology 2014
58
46

Mutations in mitochondrial histidyl tRNA synthetase HARS2 cause ovarian dysgenesis and sensorineural hearing loss of Perrault syndrome.
Sarah B Pierce, Karen M Chisholm, Eric D Lynch, Ming K Lee, Tom Walsh, John M Opitz, Weiqing Li, Rachel E Klevit, Mary-Claire King. Proc Natl Acad Sci U S A 2011
173
26

ClpP mediates activation of a mitochondrial unfolded protein response in C. elegans.
Cole M Haynes, Kseniya Petrova, Cristina Benedetti, Yun Yang, David Ron. Dev Cell 2007
347
24

New roles for mitochondrial proteases in health, ageing and disease.
Pedro M Quirós, Thomas Langer, Carlos López-Otín. Nat Rev Mol Cell Biol 2015
275
24

Mutations in the DBP-deficiency protein HSD17B4 cause ovarian dysgenesis, hearing loss, and ataxia of Perrault Syndrome.
Sarah B Pierce, Tom Walsh, Karen M Chisholm, Ming K Lee, Anne M Thornton, Agata Fiumara, John M Opitz, Ephrat Levy-Lahad, Rachel E Klevit, Mary-Claire King. Am J Hum Genet 2010
169
23

Human mitochondrial ClpP is a stable heptamer that assembles into a tetradecamer in the presence of ClpX.
Sung Gyun Kang, Mariana N Dimitrova, Joaquin Ortega, Ann Ginsburg, Michael R Maurizi. J Biol Chem 2005
75
29

ClpXP, an ATP-powered unfolding and protein-degradation machine.
Tania A Baker, Robert T Sauer. Biochim Biophys Acta 2012
251
22

CODAS syndrome is associated with mutations of LONP1, encoding mitochondrial AAA+ Lon protease.
Kevin A Strauss, Robert N Jinks, Erik G Puffenberger, Sundararajan Venkatesh, Kamalendra Singh, Iteen Cheng, Natalie Mikita, Jayapalraja Thilagavathi, Jae Lee, Stefan Sarafianos,[...]. Am J Hum Genet 2015
84
23

Exome analysis identified a novel missense mutation in the CLPP gene in a consanguineous Saudi family expanding the clinical spectrum of Perrault Syndrome type-3.
Saleem Ahmed, Musharraf Jelani, Nuha Alrayes, Hussein Sheikh Ali Mohamoud, Mona Mohammad Almramhi, Wasim Anshasi, Naushad Ali Basheer Ahmed, Jun Wang, Jamal Nasir, Jumana Yousuf Al-Aama. J Neurol Sci 2015
28
67

Expanding the genotypic spectrum of Perrault syndrome.
L A M Demain, J E Urquhart, J O'Sullivan, S G Williams, S S Bhaskar, E M Jenkinson, C M Lourenco, A Heiberg, S H Pearce, S A Shalev,[...]. Clin Genet 2017
43
44

The Mitochondrial Unfoldase-Peptidase Complex ClpXP Controls Bioenergetics Stress and Metastasis.
Jae Ho Seo, Dayana B Rivadeneira, M Cecilia Caino, Young Chan Chae, David W Speicher, Hsin-Yao Tang, Valentina Vaira, Silvano Bosari, Alessandro Palleschi, Paolo Rampini,[...]. PLoS Biol 2016
67
28

The matrix peptide exporter HAF-1 signals a mitochondrial UPR by activating the transcription factor ZC376.7 in C. elegans.
Cole M Haynes, Yun Yang, Steven P Blais, Thomas A Neubert, David Ron. Mol Cell 2010
325
18

Spastic paraplegia and OXPHOS impairment caused by mutations in paraplegin, a nuclear-encoded mitochondrial metalloprotease.
G Casari, M De Fusco, S Ciarmatori, M Zeviani, M Mora, P Fernandez, G De Michele, A Filla, S Cocozza, R Marconi,[...]. Cell 1998
599
17

ATP-dependent Lon protease controls tumor bioenergetics by reprogramming mitochondrial activity.
Pedro M Quirós, Yaiza Español, Rebeca Acín-Pérez, Francisco Rodríguez, Clea Bárcena, Kenta Watanabe, Enrique Calvo, Marta Loureiro, M Soledad Fernández-García, Antonio Fueyo,[...]. Cell Rep 2014
113
17

Mutations in the mitochondrial protease gene AFG3L2 cause dominant hereditary ataxia SCA28.
Daniela Di Bella, Federico Lazzaro, Alfredo Brusco, Massimo Plumari, Giorgio Battaglia, Annalisa Pastore, Adele Finardi, Claudia Cagnoli, Filippo Tempia, Marina Frontali,[...]. Nat Genet 2010
208
16

Down-regulation of the mitochondrial matrix peptidase ClpP in muscle cells causes mitochondrial dysfunction and decreases cell proliferation.
Sathyaseelan S Deepa, Shylesh Bhaskaran, Rojina Ranjit, Rizwan Qaisar, Binoj C Nair, Yuhong Liu, Michael E Walsh, Wilson C Fok, Holly Van Remmen. Free Radic Biol Med 2016
44
36

Functional proteolytic complexes of the human mitochondrial ATP-dependent protease, hClpXP.
Sung Gyun Kang, Joaquin Ortega, Satyendra K Singh, Nan Wang, Ning-Na Huang, Alasdair C Steven, Michael R Maurizi. J Biol Chem 2002
90
16


Loss of CLPP alleviates mitochondrial cardiomyopathy without affecting the mammalian UPRmt.
Dominic Seiferling, Karolina Szczepanowska, Christina Becker, Katharina Senft, Steffen Hermans, Priyanka Maiti, Tim König, Alexandra Kukat, Aleksandra Trifunovic. EMBO Rep 2016
55
25

A homozygous missense mutation in ERAL1, encoding a mitochondrial rRNA chaperone, causes Perrault syndrome.
Iliana A Chatzispyrou, Marielle Alders, Sergio Guerrero-Castillo, Ruben Zapata Perez, Martin A Haagmans, Laurent Mouchiroud, Janet Koster, Rob Ofman, Frank Baas, Hans R Waterham,[...]. Hum Mol Genet 2017
34
41

Perrault syndrome type 3 caused by diverse molecular defects in CLPP.
Erica J Brodie, Hanmiao Zhan, Tamanna Saiyed, Kaye N Truscott, David A Dougan. Sci Rep 2018
18
77

Mitochondrial ClpP-Mediated Proteolysis Induces Selective Cancer Cell Lethality.
Jo Ishizawa, Sarah F Zarabi, R Eric Davis, Ondrej Halgas, Takenobu Nii, Yulia Jitkova, Ran Zhao, Jonathan St-Germain, Lauren E Heese, Grace Egan,[...]. Cancer Cell 2019
71
19

Crystallography and mutagenesis point to an essential role for the N-terminus of human mitochondrial ClpP.
Sung Gyun Kang, Michael R Maurizi, Mark Thompson, Timothy Mueser, Bijan Ahvazi. J Struct Biol 2004
74
17

A mitochondrial specific stress response in mammalian cells.
Quan Zhao, Jianghui Wang, Ilya V Levichkin, Stan Stasinopoulos, Michael T Ryan, Nicholas J Hoogenraad. EMBO J 2002
594
13


Phosphorylation of human TFAM in mitochondria impairs DNA binding and promotes degradation by the AAA+ Lon protease.
Bin Lu, Jae Lee, Xiaobo Nie, Min Li, Yaroslav I Morozov, Sundararajan Venkatesh, Daniel F Bogenhagen, Dmitry Temiakov, Carolyn K Suzuki. Mol Cell 2013
171
12

Mitochondrial import efficiency of ATFS-1 regulates mitochondrial UPR activation.
Amrita M Nargund, Mark W Pellegrino, Christopher J Fiorese, Brooke M Baker, Cole M Haynes. Science 2012
509
12

First independent replication of the involvement of LARS2 in Perrault syndrome by whole-exome sequencing of an Italian family.
Giulia Soldà, Sonia Caccia, Michela Robusto, Chiara Chiereghin, Pierangela Castorina, Umberto Ambrosetti, Stefano Duga, Rosanna Asselta. J Hum Genet 2016
22
54

The i-AAA protease YME1L and OMA1 cleave OPA1 to balance mitochondrial fusion and fission.
Ruchika Anand, Timothy Wai, Michael J Baker, Nikolay Kladt, Astrid C Schauss, Elena Rugarli, Thomas Langer. J Cell Biol 2014
370
12

A Novel Missense Mutation in the CLPP Gene Causing Perrault Syndrome Type 3 in a Turkish Family.
Fatma Dursun, Hussein Sheikh Ali Mohamoud, Noreen Karim, Muhammad Naeem, Musharraf Jelani, Heves Kırmızıbekmez. J Clin Res Pediatr Endocrinol 2016
14
85

Substrate recognition and processing by a Walker B mutant of the human mitochondrial AAA+ protein CLPX.
Bradley R Lowth, Janine Kirstein-Miles, Tamanna Saiyed, Heike Brötz-Oesterhelt, Richard I Morimoto, Kaye N Truscott, David A Dougan. J Struct Biol 2012
32
37

Homozygous YME1L1 mutation causes mitochondriopathy with optic atrophy and mitochondrial network fragmentation.
Bianca Hartmann, Timothy Wai, Hao Hu, Thomas MacVicar, Luciana Musante, Björn Fischer-Zirnsak, Werner Stenzel, Ralph Gräf, Lambert van den Heuvel, Hans-Hilger Ropers,[...]. Elife 2016
58
20

Specific MRI Abnormalities Reveal Severe Perrault Syndrome due to CLPP Defects.
Tom E J Theunissen, Radek Szklarczyk, Mike Gerards, Debby M E I Hellebrekers, Elvira N M Mulder-Den Hartog, Jo Vanoevelen, Rick Kamps, Bart de Koning, S Lane Rutledge, Thomas Schmitt-Mechelke,[...]. Front Neurol 2016
16
75

Mitochondrial processing peptidase regulates PINK1 processing, import and Parkin recruitment.
Andrew W Greene, Karl Grenier, Miguel A Aguileta, Stephanie Muise, Rasoul Farazifard, M Emdadul Haque, Heidi M McBride, David S Park, Edward A Fon. EMBO Rep 2012
371
11


An Application of NGS for Molecular Investigations in Perrault Syndrome: Study of 14 Families and Review of the Literature.
Justine Lerat, Laurence Jonard, Natalie Loundon, Sophie Christin-Maitre, Didier Lacombe, Cyril Goizet, Cécile Rouzier, Lionel Van Maldergem, Souad Gherbi, Eréa-Nöel Garabedian,[...]. Hum Mutat 2016
27
40

A LON-ClpP Proteolytic Axis Degrades Complex I to Extinguish ROS Production in Depolarized Mitochondria.
Kenneth Robert Pryde, Jan Willem Taanman, Anthony Henry Schapira. Cell Rep 2016
41
26

Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism.
Byung-Gil Lee, Eun Young Park, Kyung-Eun Lee, Hyesung Jeon, Kwang Hoon Sung, Holger Paulsen, Helga Rübsamen-Schaeff, Heike Brötz-Oesterhelt, Hyun Kyu Song. Nat Struct Mol Biol 2010
140
10

Novel (ovario) leukodystrophy related to AARS2 mutations.
Cristina Dallabona, Daria Diodato, Sietske H Kevelam, Tobias B Haack, Lee-Jun Wong, Gajja S Salomons, Enrico Baruffini, Laura Melchionda, Caterina Mariotti, Tim M Strom,[...]. Neurology 2014
121
10


Whole-exome sequencing identifies homozygous AFG3L2 mutations in a spastic ataxia-neuropathy syndrome linked to mitochondrial m-AAA proteases.
Tyler Mark Pierson, David Adams, Florian Bonn, Paola Martinelli, Praveen F Cherukuri, Jamie K Teer, Nancy F Hansen, Pedro Cruz, James C Mullikin For The Nisc Comparative Sequencing Program, Robert W Blakesley,[...]. PLoS Genet 2011
137
10

Mutations in LONP1, a mitochondrial matrix protease, cause CODAS syndrome.
Esra Dikoglu, Ali Alfaiz, Maria Gorna, Deborah Bertola, Jong Hee Chae, Tae-Joon Cho, Murat Derbent, Yasemin Alanay, Tulay Guran, Ok-Hwa Kim,[...]. Am J Med Genet A 2015
41
24

Perrault syndrome: evidence for progressive nervous system involvement.
Agata Fiumara, Giovanni Sorge, Antonio Toscano, Enrico Parano, Lorenzo Pavone, John M Opitz. Am J Med Genet A 2004
35
28

HIF-1 regulates cytochrome oxidase subunits to optimize efficiency of respiration in hypoxic cells.
Ryo Fukuda, Huafeng Zhang, Jung-whan Kim, Larissa Shimoda, Chi V Dang, Gregg L Semenza. Cell 2007
786
10

Parkinsonism, premature menopause, and mitochondrial DNA polymerase gamma mutations: clinical and molecular genetic study.
Petri Luoma, Atle Melberg, Juha O Rinne, Jyrki A Kaukonen, Nina N Nupponen, Richard M Chalmers, Anders Oldfors, Ilkka Rautakorpi, Leena Peltonen, Kari Majamaa,[...]. Lancet 2004
388
10

Phenyl Esters Are Potent Inhibitors of Caseinolytic Protease P and Reveal a Stereogenic Switch for Deoligomerization.
Mathias W Hackl, Markus Lakemeyer, Maria Dahmen, Manuel Glaser, Axel Pahl, Katrin Lorenz-Baath, Thomas Menzel, Sonja Sievers, Thomas Böttcher, Iris Antes,[...]. J Am Chem Soc 2015
49
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.