A citation-based method for searching scientific literature

Jiasen Liu, Li Zhang, Lingyang Xu, Hangxing Ren, Jian Lu, Xiaoning Zhang, Shifang Zhang, Xinlei Zhou, Caihong Wei, Fuping Zhao, Lixin Du. BMC Genomics 2013
Times Cited: 57







List of co-cited articles
397 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Global variation in copy number in the human genome.
Richard Redon, Shumpei Ishikawa, Karen R Fitch, Lars Feuk, George H Perry, T Daniel Andrews, Heike Fiegler, Michael H Shapero, Andrew R Carson, Wenwei Chen,[...]. Nature 2006
61

Genomic characteristics of cattle copy number variations.
Yali Hou, George E Liu, Derek M Bickhart, Maria Francesca Cardone, Kai Wang, Eui-Soo Kim, Lakshmi K Matukumalli, Mario Ventura, Jiuzhou Song, Paul M VanRaden,[...]. BMC Genomics 2011
144
59

PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data.
Kai Wang, Mingyao Li, Dexter Hadley, Rui Liu, Joseph Glessner, Struan F A Grant, Hakon Hakonarson, Maja Bucan. Genome Res 2007
54

A first comparative map of copy number variations in the sheep genome.
L Fontanesi, F Beretti, P L Martelli, M Colombo, S Dall'olio, M Occidente, B Portolano, R Casadio, D Matassino, V Russo. Genomics 2011
69
52

Analysis of copy number variations among diverse cattle breeds.
George E Liu, Yali Hou, Bin Zhu, Maria Francesca Cardone, Lu Jiang, Angelo Cellamare, Apratim Mitra, Leeson J Alexander, Luiz L Coutinho, Maria Elena Dell'Aquila,[...]. Genome Res 2010
191
49

Origins and functional impact of copy number variation in the human genome.
Donald F Conrad, Dalila Pinto, Richard Redon, Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T Daniel Andrews, Chris Barnes, Peter Campbell,[...]. Nature 2010
47

Copy number variation in the bovine genome.
João Fadista, Bo Thomsen, Lars-Erik Holm, Christian Bendixen. BMC Genomics 2010
115
42

Copy number variation of individual cattle genomes using next-generation sequencing.
Derek M Bickhart, Yali Hou, Steven G Schroeder, Can Alkan, Maria Francesca Cardone, Lakshmi K Matukumalli, Jiuzhou Song, Robert D Schnabel, Mario Ventura, Jeremy F Taylor,[...]. Genome Res 2012
185
42

An initial comparative map of copy number variations in the goat (Capra hircus) genome.
Luca Fontanesi, Pier Luigi Martelli, Francesca Beretti, Valentina Riggio, Stefania Dall'Olio, Michela Colombo, Rita Casadio, Vincenzo Russo, Baldassare Portolano. BMC Genomics 2010
87
40

Structural variation in the human genome.
Lars Feuk, Andrew R Carson, Stephen W Scherer. Nat Rev Genet 2006
38

Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
714
38

Identification of copy number variations and common deletion polymorphisms in cattle.
Joon Seol Bae, Hyun Sub Cheong, Lyoung Hyo Kim, Suk NamGung, Tae Joon Park, Ji-Yong Chun, Jason Yongha Kim, Charisse Flerida A Pasaje, Jin Sol Lee, Hyoung Doo Shin. BMC Genomics 2010
99
36

A snapshot of CNVs in the pig genome.
João Fadista, Marianne Nygaard, Lars-Erik Holm, Bo Thomsen, Christian Bendixen. PLoS One 2008
89
35

A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits.
Congying Chen, Ruimin Qiao, Rongxing Wei, Yuanmei Guo, Huashui Ai, Junwu Ma, Jun Ren, Lusheng Huang. BMC Genomics 2012
66
35

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array.
Yali Hou, Derek M Bickhart, Miranda L Hvinden, Congjun Li, Jiuzhou Song, Didier A Boichard, Sébastien Fritz, André Eggen, Sue DeNise, George R Wiggans,[...]. BMC Genomics 2012
60
35

Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication.
Yogesh Paudel, Ole Madsen, Hendrik-Jan Megens, Laurent A F Frantz, Mirte Bosse, John W M Bastiaansen, Richard P M A Crooijmans, Martien A M Groenen. BMC Genomics 2013
85
29

Copy number variation in the porcine genome inferred from a 60 k SNP BeadChip.
Yuliaxis Ramayo-Caldas, Anna Castelló, Romi N Pena, Estefania Alves, Anna Mercadé, Carla A Souza, Ana I Fernández, Miguel Perez-Enciso, Josep M Folch. BMC Genomics 2010
81
29

Genome-wide detection of copy number variations using high-density SNP genotyping platforms in Holsteins.
Li Jiang, Jicai Jiang, Jie Yang, Xuan Liu, Jiying Wang, Haifei Wang, Xiangdong Ding, Jianfeng Liu, Qin Zhang. BMC Genomics 2013
59
29

A genome-wide detection of copy number variations using SNP genotyping arrays in swine.
Jiying Wang, Jicai Jiang, Weixuan Fu, Li Jiang, Xiangdong Ding, Jian-Feng Liu, Qin Zhang. BMC Genomics 2012
71
28

Mapping copy number variation by population-scale genome sequencing.
Ryan E Mills, Klaudia Walter, Chip Stewart, Robert E Handsaker, Ken Chen, Can Alkan, Alexej Abyzov, Seungtai Chris Yoon, Kai Ye, R Keira Cheetham,[...]. Nature 2011
728
28

Genome-wide detection of CNVs in Chinese indigenous sheep with different types of tails using ovine high-density 600K SNP arrays.
Caiye Zhu, Hongying Fan, Zehu Yuan, Shijin Hu, Xiaomeng Ma, Junli Xuan, Hongwei Wang, Li Zhang, Caihong Wei, Qin Zhang,[...]. Sci Rep 2016
37
43

QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data.
Stefano Colella, Christopher Yau, Jennifer M Taylor, Ghazala Mirza, Helen Butler, Penny Clouston, Anne S Bassett, Anneke Seller, Christopher C Holmes, Jiannis Ragoussis. Nucleic Acids Res 2007
418
26

Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle.
Yali Hou, George E Liu, Derek M Bickhart, Lakshmi K Matukumalli, Congjun Li, Jiuzhou Song, Louis C Gasbarre, Curtis P Van Tassell, Tad S Sonstegard. Funct Integr Genomics 2012
67
26

Genome-wide identification of copy number variations in Chinese Holstein.
Li Jiang, Jicai Jiang, Jiying Wang, Xiangdong Ding, Jianfeng Liu, Qin Zhang. PLoS One 2012
39
35

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery.
Paul Stothard, Jung-Woo Choi, Urmila Basu, Jennifer M Sumner-Thomson, Yan Meng, Xiaoping Liao, Stephen S Moore. BMC Genomics 2011
104
24

Distribution and functional impact of DNA copy number variation in the rat.
Victor Guryev, Kathrin Saar, Tatjana Adamovic, Mark Verheul, Sebastiaan A A C van Heesch, Stuart Cook, Michal Pravenec, Timothy Aitman, Howard Jacob, James D Shull,[...]. Nat Genet 2008
154
24

Diversity of copy number variation in a worldwide population of sheep.
Liu Yang, Lingyang Xu, Yang Zhou, Mei Liu, Lei Wang, James W Kijas, Hongping Zhang, Li Li, George E Liu. Genomics 2018
32
43

Copy number variation in intron 1 of SOX5 causes the Pea-comb phenotype in chickens.
Dominic Wright, Henrik Boije, Jennifer R S Meadows, Bertrand Bed'hom, David Gourichon, Agathe Vieaud, Michèle Tixier-Boichard, Carl-Johan Rubin, Freyja Imsland, Finn Hallböök,[...]. PLoS Genet 2009
142
22

Comparing CNV detection methods for SNP arrays.
Laura Winchester, Christopher Yau, Jiannis Ragoussis. Brief Funct Genomic Proteomic 2009
141
22


Detection of copy number variations and their effects in Chinese bulls.
Liangzhi Zhang, Shangang Jia, Mingjuan Yang, Yao Xu, Congjun Li, Jiajie Sun, Yongzhen Huang, Xianyong Lan, Chuzhao Lei, Yang Zhou,[...]. BMC Genomics 2014
35
37


Copy number variation and missense mutations of the agouti signaling protein (ASIP) gene in goat breeds with different coat colors.
L Fontanesi, F Beretti, V Riggio, E Gómez González, S Dall'Olio, R Davoli, V Russo, B Portolano. Cytogenet Genome Res 2009
86
21

Copy number variation in the domestic dog.
Carlos E Alvarez, Joshua M Akey. Mamm Genome 2012
39
30

A high-resolution map of segmental DNA copy number variation in the mouse genome.
Timothy A Graubert, Patrick Cahan, Deepa Edwin, Rebecca R Selzer, Todd A Richmond, Peggy S Eis, William D Shannon, Xia Li, Howard L McLeod, James M Cheverud,[...]. PLoS Genet 2007
176
21

Genome-wide detection of copy number variation in Chinese indigenous sheep using an ovine high-density 600 K SNP array.
Qing Ma, Xuexue Liu, Jianfei Pan, Lina Ma, Yuehui Ma, Xiaohong He, Qianjun Zhao, Yabin Pu, Yingkang Li, Lin Jiang. Sci Rep 2017
28
42

Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants.
Dalila Pinto, Katayoon Darvishi, Xinghua Shi, Diana Rajan, Diane Rigler, Tom Fitzgerald, Anath C Lionel, Bhooma Thiruvahindrapuram, Jeffrey R Macdonald, Ryan Mills,[...]. Nat Biotechnol 2011
299
19

Large-scale copy number polymorphism in the human genome.
Jonathan Sebat, B Lakshmi, Jennifer Troge, Joan Alexander, Janet Young, Pär Lundin, Susanne Månér, Hillary Massa, Megan Walker, Maoyen Chi,[...]. Science 2004
19

Copy number variation in the horse genome.
Sharmila Ghosh, Zhipeng Qu, Pranab J Das, Erica Fang, Rytis Juras, E Gus Cothran, Sue McDonell, Daniel G Kenney, Teri L Lear, David L Adelson,[...]. PLoS Genet 2014
44
25

Analysis of copy number variations by SNP50 BeadChip array in Chinese sheep.
Youji Ma, Quanwei Zhang, Zengkui Lu, Xingxu Zhao, Yong Zhang. Genomics 2015
12
91

Novel origins of copy number variation in the dog genome.
Jonas Berglund, Elisa M Nevalainen, Anna-Maja Molin, Michele Perloski, Catherine André, Michael C Zody, Ted Sharpe, Christophe Hitte, Kerstin Lindblad-Toh, Hannes Lohi,[...]. Genome Biol 2012
55
20

Population-genetic properties of differentiated copy number variations in cattle.
Lingyang Xu, Yali Hou, Derek M Bickhart, Yang Zhou, El Hamidi Abdel Hay, Jiuzhou Song, Tad S Sonstegard, Curtis P Van Tassell, George E Liu. Sci Rep 2016
43
25

Identification of genome-wide copy number variations among diverse pig breeds by array CGH.
Yan Li, Shuqi Mei, Xuying Zhang, Xianwen Peng, Gang Liu, Hu Tao, Huayu Wu, Siwen Jiang, Yuanzhu Xiong, Fenge Li. BMC Genomics 2012
36
27

Identification of genome-wide copy number variations among diverse pig breeds using SNP genotyping arrays.
Jiying Wang, Haifei Wang, Jicai Jiang, Huimin Kang, Xiaotian Feng, Qin Zhang, Jian-Feng Liu. PLoS One 2013
25
40

Copy number variation: new insights in genome diversity.
Jennifer L Freeman, George H Perry, Lars Feuk, Richard Redon, Steven A McCarroll, David M Altshuler, Hiroyuki Aburatani, Keith W Jones, Chris Tyler-Smith, Matthew E Hurles,[...]. Genome Res 2006
505
17

Large scale variation in DNA copy number in chicken breeds.
Richard P M A Crooijmans, Mark S Fife, Tomas W Fitzgerald, Shurnevia Strickland, Hans H Cheng, Pete Kaiser, Richard Redon, Martien A M Groenen. BMC Genomics 2013
38
26

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
17

Global assessment of genomic variation in cattle by genome resequencing and high-throughput genotyping.
Bujie Zhan, João Fadista, Bo Thomsen, Jakob Hedegaard, Frank Panitz, Christian Bendixen. BMC Genomics 2011
56
17

Analysis of copy loss and gain variations in Holstein cattle autosomes using BeadChip SNPs.
Eyal Seroussi, Giora Glick, Andrey Shirak, Emanuel Yakobson, Joel I Weller, Ephraim Ezra, Yoel Zeron. BMC Genomics 2010
55
18

Genome structural variation discovery and genotyping.
Can Alkan, Bradley P Coe, Evan E Eichler. Nat Rev Genet 2011
782
17


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.