A citation-based method for searching scientific literature

Thomas Panier, Sebastián A Romano, Raphaël Olive, Thomas Pietri, Germán Sumbre, Raphaël Candelier, Georges Debrégeas. Front Neural Circuits 2013
Times Cited: 121







List of co-cited articles
900 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
654
71

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
40

Brain-wide neuronal dynamics during motor adaptation in zebrafish.
Misha B Ahrens, Jennifer M Li, Michael B Orger, Drew N Robson, Alexander F Schier, Florian Engert, Ruben Portugues. Nature 2012
364
33

Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior.
Ruben Portugues, Claudia E Feierstein, Florian Engert, Michael B Orger. Neuron 2014
149
29

Optical sectioning deep inside live embryos by selective plane illumination microscopy.
Jan Huisken, Jim Swoger, Filippo Del Bene, Joachim Wittbrodt, Ernst H K Stelzer. Science 2004
29

Light-sheet functional imaging in fictively behaving zebrafish.
Nikita Vladimirov, Yu Mu, Takashi Kawashima, Davis V Bennett, Chao-Tsung Yang, Loren L Looger, Philipp J Keller, Jeremy Freeman, Misha B Ahrens. Nat Methods 2014
149
28

Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy.
Philipp J Keller, Annette D Schmidt, Joachim Wittbrodt, Ernst H K Stelzer. Science 2008
840
22

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.
Robert Prevedel, Young-Gyu Yoon, Maximilian Hoffmann, Nikita Pak, Gordon Wetzstein, Saul Kato, Tina Schrödel, Ramesh Raskar, Manuel Zimmer, Edward S Boyden,[...]. Nat Methods 2014
304
19

Mapping brain activity at scale with cluster computing.
Jeremy Freeman, Nikita Vladimirov, Takashi Kawashima, Yu Mu, Nicholas J Sofroniew, Davis V Bennett, Joshua Rosen, Chao-Tsung Yang, Loren L Looger, Misha B Ahrens. Nat Methods 2014
143
19

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms.
Matthew B Bouchard, Venkatakaushik Voleti, César S Mendes, Clay Lacefield, Wesley B Grueber, Richard S Mann, Randy M Bruno, Elizabeth M C Hillman. Nat Photonics 2015
242
19

Whole-brain activity mapping onto a zebrafish brain atlas.
Owen Randlett, Caroline L Wee, Eva A Naumann, Onyeka Nnaemeka, David Schoppik, James E Fitzgerald, Ruben Portugues, Alix M B Lacoste, Clemens Riegler, Florian Engert,[...]. Nat Methods 2015
215
19

Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.
Timothy W Dunn, Yu Mu, Sujatha Narayan, Owen Randlett, Eva A Naumann, Chao-Tsung Yang, Alexander F Schier, Jeremy Freeman, Florian Engert, Misha B Ahrens. Elife 2016
120
18

Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.
Raju Tomer, Khaled Khairy, Fernando Amat, Philipp J Keller. Nat Methods 2012
297
17


Whole-brain functional imaging with two-photon light-sheet microscopy.
Sébastien Wolf, Willy Supatto, Georges Debrégeas, Pierre Mahou, Sergei G Kruglik, Jean-Marc Sintes, Emmanuel Beaurepaire, Raphaël Candelier. Nat Methods 2015
68
25


Control of visually guided behavior by distinct populations of spinal projection neurons.
Michael B Orger, Adam R Kampff, Kristen E Severi, Johann H Bollmann, Florian Engert. Nat Neurosci 2008
162
15

Multiview light-sheet microscope for rapid in toto imaging.
Uros Krzic, Stefan Gunther, Timothy E Saunders, Sebastian J Streichan, Lars Hufnagel. Nat Methods 2012
256
14

Deep and fast live imaging with two-photon scanned light-sheet microscopy.
Thai V Truong, Willy Supatto, David S Koos, John M Choi, Scott E Fraser. Nat Methods 2011
276
14

Whole-central nervous system functional imaging in larval Drosophila.
William C Lemon, Stefan R Pulver, Burkhard Höckendorf, Katie McDole, Kristin Branson, Jeremy Freeman, Philipp J Keller. Nat Commun 2015
106
14

Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.
Bi-Chang Chen, Wesley R Legant, Kai Wang, Lin Shao, Daniel E Milkie, Michael W Davidson, Chris Janetopoulos, Xufeng S Wu, John A Hammer, Zhe Liu,[...]. Science 2014
887
14

SPED Light Sheet Microscopy: Fast Mapping of Biological System Structure and Function.
Raju Tomer, Matthew Lovett-Barron, Isaac Kauvar, Aaron Andalman, Vanessa M Burns, Sethuraman Sankaran, Logan Grosenick, Michael Broxton, Samuel Yang, Karl Deisseroth. Cell 2015
117
14

Neural control and modulation of swimming speed in the larval zebrafish.
Kristen E Severi, Ruben Portugues, João C Marques, Donald M O'Malley, Michael B Orger, Florian Engert. Neuron 2014
107
13

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
724
13

Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination.
Thomas A Planchon, Liang Gao, Daniel E Milkie, Michael W Davidson, James A Galbraith, Catherine G Galbraith, Eric Betzig. Nat Methods 2011
510
13

Spontaneous neuronal network dynamics reveal circuit's functional adaptations for behavior.
Sebastián A Romano, Thomas Pietri, Verónica Pérez-Schuster, Adrien Jouary, Mathieu Haudrechy, Germán Sumbre. Neuron 2015
65
20

Optimization of a GCaMP calcium indicator for neural activity imaging.
Jasper Akerboom, Tsai-Wen Chen, Trevor J Wardill, Lin Tian, Jonathan S Marvin, Sevinç Mutlu, Nicole Carreras Calderón, Federico Esposti, Bart G Borghuis, Xiaonan Richard Sun,[...]. J Neurosci 2012
758
12

Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy.
Philipp J Keller, Annette D Schmidt, Anthony Santella, Khaled Khairy, Zhirong Bao, Joachim Wittbrodt, Ernst H K Stelzer. Nat Methods 2010
316
12

Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.
Yicong Wu, Peter Wawrzusin, Justin Senseney, Robert S Fischer, Ryan Christensen, Anthony Santella, Andrew G York, Peter W Winter, Clare M Waterman, Zhirong Bao,[...]. Nat Biotechnol 2013
170
12

Whole-animal functional and developmental imaging with isotropic spatial resolution.
Raghav K Chhetri, Fernando Amat, Yinan Wan, Burkhard Höckendorf, William C Lemon, Philipp J Keller. Nat Methods 2015
119
12

Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light.
Tina Schrödel, Robert Prevedel, Karin Aumayr, Manuel Zimmer, Alipasha Vaziri. Nat Methods 2013
157
11

Monitoring neural activity with bioluminescence during natural behavior.
Eva A Naumann, Adam R Kampff, David A Prober, Alexander F Schier, Florian Engert. Nat Neurosci 2010
134
11

High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics.
Benjamin Schmid, Gopi Shah, Nico Scherf, Michael Weber, Konstantin Thierbach, Citlali Pérez Campos, Ingo Roeder, Pia Aanstad, Jan Huisken. Nat Commun 2013
101
11



OpenSPIM: an open-access light-sheet microscopy platform.
Peter G Pitrone, Johannes Schindelin, Luke Stuyvenberg, Stephan Preibisch, Michael Weber, Kevin W Eliceiri, Jan Huisken, Pavel Tomancak. Nat Methods 2013
174
11

From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.
Eva A Naumann, James E Fitzgerald, Timothy W Dunn, Jason Rihel, Haim Sompolinsky, Florian Engert. Cell 2016
120
11

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
10


Scanned light sheet microscopy with confocal slit detection.
Eugen Baumgart, Ulrich Kubitscheck. Opt Express 2012
115
10

Advanced CLARITY for rapid and high-resolution imaging of intact tissues.
Raju Tomer, Li Ye, Brian Hsueh, Karl Deisseroth. Nat Protoc 2014
491
10

Prey capture behavior evoked by simple visual stimuli in larval zebrafish.
Isaac H Bianco, Adam R Kampff, Florian Engert. Front Syst Neurosci 2011
140
10

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
10

Rapid 3D light-sheet microscopy with a tunable lens.
Florian O Fahrbach, Fabian F Voigt, Benjamin Schmid, Fritjof Helmchen, Jan Huisken. Opt Express 2013
160
10


Spontaneous activity governs olfactory representations in spatially organized habenular microcircuits.
Suresh Kumar Jetti, Nuria Vendrell-Llopis, Emre Yaksi. Curr Biol 2014
57
15


Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
9

Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.
Sean Quirin, Nikita Vladimirov, Chao-Tsung Yang, Darcy S Peterka, Rafael Yuste, Misha B Ahrens. Opt Lett 2016
38
23

Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans.
Jeffrey P Nguyen, Frederick B Shipley, Ashley N Linder, George S Plummer, Mochi Liu, Sagar U Setru, Joshua W Shaevitz, Andrew M Leifer. Proc Natl Acad Sci U S A 2016
157
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.