A citation-based method for searching scientific literature

Zhongqin Yang, Bihe Hu, Yuhui Zhang, Qingming Luo, Hui Gong. PLoS One 2013
Times Cited: 29







List of co-cited articles
116 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Micro-optical sectioning tomography to obtain a high-resolution atlas of the mouse brain.
Anan Li, Hui Gong, Bin Zhang, Qingdi Wang, Cheng Yan, Jingpeng Wu, Qian Liu, Shaoqun Zeng, Qingming Luo. Science 2010
228
55

High-throughput dual-colour precision imaging for brain-wide connectome with cytoarchitectonic landmarks at the cellular level.
Hui Gong, Dongli Xu, Jing Yuan, Xiangning Li, Congdi Guo, Jie Peng, Yuxin Li, Lindsay A Schwarz, Anan Li, Bihe Hu,[...]. Nat Commun 2016
105
55

Continuously tracing brain-wide long-distance axonal projections in mice at a one-micron voxel resolution.
Hui Gong, Shaoqun Zeng, Cheng Yan, Xiaohua Lv, Zhongqin Yang, Tonghui Xu, Zhao Feng, Wenxiang Ding, Xiaoli Qi, Anan Li,[...]. Neuroimage 2013
104
48

Serial two-photon tomography for automated ex vivo mouse brain imaging.
Timothy Ragan, Lolahon R Kadiri, Kannan Umadevi Venkataraju, Karsten Bahlmann, Jason Sutin, Julian Taranda, Ignacio Arganda-Carreras, Yongsoo Kim, H Sebastian Seung, Pavel Osten. Nat Methods 2012
307
37

Chemical reactivation of quenched fluorescent protein molecules enables resin-embedded fluorescence microimaging.
Hanqing Xiong, Zhenqiao Zhou, Mingqiang Zhu, Xiaohua Lv, Anan Li, Shiwei Li, Longhui Li, Tao Yang, Siming Wang, Zhongqin Yang,[...]. Nat Commun 2014
50
37

Protein localization in electron micrographs using fluorescence nanoscopy.
Shigeki Watanabe, Annedore Punge, Gunther Hollopeter, Katrin I Willig, Robert John Hobson, M Wayne Davis, Stefan W Hell, Erik M Jorgensen. Nat Methods 2011
238
34

Visualization of brain circuits using two-photon fluorescence micro-optical sectioning tomography.
Ting Zheng, Zhongqing Yang, Anan Li, Xiaohua Lv, Zhenqiao Zhou, Xiaojun Wang, Xiaoli Qi, Shiwei Li, Qingming Luo, Hui Gong,[...]. Opt Express 2013
40
31

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
175
27

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
673
24

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
618
24

Embedding and Chemical Reactivation of Green Fluorescent Protein in the Whole Mouse Brain for Optical Micro-Imaging.
Yadong Gang, Hongfu Zhou, Yao Jia, Ling Liu, Xiuli Liu, Gong Rao, Longhui Li, Xiaojun Wang, Xiaohua Lv, Hanqing Xiong,[...]. Front Neurosci 2017
20
35


A single method for cryofixation and correlative light, electron microscopy and tomography of zebrafish embryos.
Susan J Nixon, Richard I Webb, Matthias Floetenmeyer, Nicole Schieber, Harriet P Lo, Robert G Parton. Traffic 2009
95
20


Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
20

Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP.
G Feng, R H Mellor, M Bernstein, C Keller-Peck, Q T Nguyen, M Wallace, J M Nerbonne, J W Lichtman, J R Sanes. Neuron 2000
17

Correlative imaging of fluorescent proteins in resin-embedded plant material.
Karen Bell, Steve Mitchell, Danae Paultre, Markus Posch, Karl Oparka. Plant Physiol 2013
44
17

A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex.
Hiroki Taniguchi, Miao He, Priscilla Wu, Sangyong Kim, Raehum Paik, Ken Sugino, Duda Kvitsiani, Yu Fu, Jiangteng Lu, Ying Lin,[...]. Neuron 2011
975
17

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
17

NeuroGPS: automated localization of neurons for brain circuits using L1 minimization model.
Tingwei Quan, Ting Zheng, Zhongqing Yang, Wenxiang Ding, Shiwei Li, Jing Li, Hang Zhou, Qingming Luo, Hui Gong, Shaoqun Zeng. Sci Rep 2013
25
20

Single-cell phenotyping within transparent intact tissue through whole-body clearing.
Bin Yang, Jennifer B Treweek, Rajan P Kulkarni, Benjamin E Deverman, Chun-Kan Chen, Eric Lubeck, Sheel Shah, Long Cai, Viviana Gradinaru. Cell 2014
514
17

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.
Hiroshi Hama, Hiroshi Kurokawa, Hiroyuki Kawano, Ryoko Ando, Tomomi Shimogori, Hisayori Noda, Kiyoko Fukami, Asako Sakaue-Sawano, Atsushi Miyawaki. Nat Neurosci 2011
709
17

Mapping of quantitative trait loci underlying cold tolerance in rice seedlings via high-throughput sequencing of pooled extremes.
Zemao Yang, Daiqing Huang, Weiqi Tang, Yan Zheng, Kangjing Liang, Adrian J Cutler, Weiren Wu. PLoS One 2013
93
17

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
624
17

Shrinkage-mediated imaging of entire organs and organisms using uDISCO.
Chenchen Pan, Ruiyao Cai, Francesca Paola Quacquarelli, Alireza Ghasemigharagoz, Athanasios Lourbopoulos, Paweł Matryba, Nikolaus Plesnila, Martin Dichgans, Farida Hellal, Ali Ertürk. Nat Methods 2016
261
17

Correlated fluorescence and 3D electron microscopy with high sensitivity and spatial precision.
Wanda Kukulski, Martin Schorb, Sonja Welsch, Andrea Picco, Marko Kaksonen, John A G Briggs. J Cell Biol 2011
270
13

Visualization of identified GFP-expressing cells by light and electron microscopy.
Katherine Luby-Phelps, Gang Ning, Joseph Fogerty, Joseph C Besharse. J Histochem Cytochem 2003
47
13


Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
505
13

Advanced CLARITY for rapid and high-resolution imaging of intact tissues.
Raju Tomer, Li Ye, Brian Hsueh, Karl Deisseroth. Nat Protoc 2014
451
13

NeuroGPS-Tree: automatic reconstruction of large-scale neuronal populations with dense neurites.
Tingwei Quan, Hang Zhou, Jing Li, Shiwei Li, Anan Li, Yuxin Li, Xiaohua Lv, Qingming Luo, Hui Gong, Shaoqun Zeng. Nat Methods 2016
48
13

Visible rodent brain-wide networks at single-neuron resolution.
Jing Yuan, Hui Gong, Anan Li, Xiangning Li, Shangbin Chen, Shaoqun Zeng, Qingming Luo. Front Neuroanat 2015
21
19

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
13

A platform for efficient identification of molecular phenotypes of brain-wide neural circuits.
Tao Jiang, Ben Long, Hui Gong, Tonghui Xu, Xiangning Li, Zhuonan Duan, Anan Li, Lei Deng, Qiuyuan Zhong, Xue Peng,[...]. Sci Rep 2017
12
33

High-Speed and Scalable Whole-Brain Imaging in Rodents and Primates.
Kaoru Seiriki, Atsushi Kasai, Takeshi Hashimoto, Wiebke Schulze, Misaki Niu, Shun Yamaguchi, Takanobu Nakazawa, Ken-Ichi Inoue, Shiori Uezono, Masahiko Takada,[...]. Neuron 2017
45
13

TDat: An Efficient Platform for Processing Petabyte-Scale Whole-Brain Volumetric Images.
Yuxin Li, Hui Gong, Xiaoquan Yang, Jing Yuan, Tao Jiang, Xiangning Li, Qingtao Sun, Dan Zhu, Zhenyu Wang, Qingming Luo,[...]. Front Neural Circuits 2017
21
19

Confocal/TEM overlay microscopy: a simple method for correlating confocal and electron microscopy of cells expressing GFP/YFP fusion proteins.
Douglas R Keene, Sara F Tufa, Gregory P Lunstrum, Paul Holden, William A Horton. Microsc Microanal 2008
28
10

The green fluorescent protein.
R Y Tsien. Annu Rev Biochem 1998
10

New Sectioning Techniques for Light and Electron Microscopy.
S B Newman, E Borysko, M Swerdlow. Science 1949
159
10

Staining and embedding the whole mouse brain for electron microscopy.
Shawn Mikula, Jonas Binding, Winfried Denk. Nat Methods 2012
80
10



Sudan black B reduces autofluorescence in murine renal tissue.
Yan Sun, Hong Yu, Dong Zheng, Qi Cao, Ya Wang, David Harris, Yiping Wang. Arch Pathol Lab Med 2011
52
10

Whole-body imaging with single-cell resolution by tissue decolorization.
Kazuki Tainaka, Shimpei I Kubota, Takeru Q Suyama, Etsuo A Susaki, Dimitri Perrin, Maki Ukai-Tadenuma, Hideki Ukai, Hiroki R Ueda. Cell 2014
245
10

Mapping brain circuitry with a light microscope.
Pavel Osten, Troy W Margrie. Nat Methods 2013
131
10

ClearT: a detergent- and solvent-free clearing method for neuronal and non-neuronal tissue.
Takaaki Kuwajima, Austen A Sitko, Punita Bhansali, Chris Jurgens, William Guido, Carol Mason. Development 2013
273
10

Scalable and DiI-compatible optical clearance of the mammalian brain.
Bing Hou, Dan Zhang, Shan Zhao, Mengping Wei, Zaifu Yang, Shaoxia Wang, Jiarui Wang, Xin Zhang, Bing Liu, Lingzhong Fan,[...]. Front Neuroanat 2015
102
10

ScaleS: an optical clearing palette for biological imaging.
Hiroshi Hama, Hiroyuki Hioki, Kana Namiki, Tetsushi Hoshida, Hiroshi Kurokawa, Fumiyoshi Ishidate, Takeshi Kaneko, Takumi Akagi, Takashi Saito, Takaomi Saido,[...]. Nat Neurosci 2015
284
10

3D BrainCV: simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution.
Jingpeng Wu, Yong He, Zhongqin Yang, Congdi Guo, Qingming Luo, Wei Zhou, Shangbin Chen, Anan Li, Benyi Xiong, Tao Jiang,[...]. Neuroimage 2014
57
10

Neural networks of the mouse neocortex.
Brian Zingg, Houri Hintiryan, Lin Gou, Monica Y Song, Maxwell Bay, Michael S Bienkowski, Nicholas N Foster, Seita Yamashita, Ian Bowman, Arthur W Toga,[...]. Cell 2014
355
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.