A citation-based method for searching scientific literature

Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews, Stuart McLaren, Ian Sealy, Mario Caccamo, Carol Churcher, Carol Scott, Jeffrey C Barrett, Romke Koch, Gerd-Jörg Rauch, Simon White, William Chow, Britt Kilian, Leonor T Quintais, José A Guerra-Assunção, Yi Zhou, Yong Gu, Jennifer Yen, Jan-Hinnerk Vogel, Tina Eyre, Seth Redmond, Ruby Banerjee, Jianxiang Chi, Beiyuan Fu, Elizabeth Langley, Sean F Maguire, Gavin K Laird, David Lloyd, Emma Kenyon, Sarah Donaldson, Harminder Sehra, Jeff Almeida-King, Jane Loveland, Stephen Trevanion, Matt Jones, Mike Quail, Dave Willey, Adrienne Hunt, John Burton, Sarah Sims, Kirsten McLay, Bob Plumb, Joy Davis, Chris Clee, Karen Oliver, Richard Clark, Clare Riddle, David Elliot, Glen Threadgold, Glenn Harden, Darren Ware, Sharmin Begum, Beverley Mortimore, Giselle Kerry, Paul Heath, Benjamin Phillimore, Alan Tracey, Nicole Corby, Matthew Dunn, Christopher Johnson, Jonathan Wood, Susan Clark, Sarah Pelan, Guy Griffiths, Michelle Smith, Rebecca Glithero, Philip Howden, Nicholas Barker, Christine Lloyd, Christopher Stevens, Joanna Harley, Karen Holt, Georgios Panagiotidis, Jamieson Lovell, Helen Beasley, Carl Henderson, Daria Gordon, Katherine Auger, Deborah Wright, Joanna Collins, Claire Raisen, Lauren Dyer, Kenric Leung, Lauren Robertson, Kirsty Ambridge, Daniel Leongamornlert, Sarah McGuire, Ruth Gilderthorp, Coline Griffiths, Deepa Manthravadi, Sarah Nichol, Gary Barker, Siobhan Whitehead, Michael Kay, Jacqueline Brown, Clare Murnane, Emma Gray, Matthew Humphries, Neil Sycamore, Darren Barker, David Saunders, Justene Wallis, Anne Babbage, Sian Hammond, Maryam Mashreghi-Mohammadi, Lucy Barr, Sancha Martin, Paul Wray, Andrew Ellington, Nicholas Matthews, Matthew Ellwood, Rebecca Woodmansey, Graham Clark, James D Cooper, Anthony Tromans, Darren Grafham, Carl Skuce, Richard Pandian, Robert Andrews, Elliot Harrison, Andrew Kimberley, Jane Garnett, Nigel Fosker, Rebekah Hall, Patrick Garner, Daniel Kelly, Christine Bird, Sophie Palmer, Ines Gehring, Andrea Berger, Christopher M Dooley, Zübeyde Ersan-Ürün, Cigdem Eser, Horst Geiger, Maria Geisler, Lena Karotki, Anette Kirn, Judith Konantz, Martina Konantz, Martina Oberländer, Silke Rudolph-Geiger, Mathias Teucke, Christa Lanz, Günter Raddatz, Kazutoyo Osoegawa, Baoli Zhu, Amanda Rapp, Sara Widaa, Cordelia Langford, Fengtang Yang, Stephan C Schuster, Nigel P Carter, Jennifer Harrow, Zemin Ning, Javier Herrero, Steve M J Searle, Anton Enright, Robert Geisler, Ronald H A Plasterk, Charles Lee, Monte Westerfield, Pieter J de Jong, Leonard I Zon, John H Postlethwait, Christiane Nüsslein-Volhard, Tim J P Hubbard, Hugues Roest Crollius, Jane Rogers, Derek L Stemple. Nature 2013
Times Cited: 1863







List of co-cited articles
501 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
18

Zebrafish as an emerging model for studying complex brain disorders.
Allan V Kalueff, Adam Michael Stewart, Robert Gerlai. Trends Pharmacol Sci 2014
416
10

Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond.
Allan V Kalueff, Michael Gebhardt, Adam Michael Stewart, Jonathan M Cachat, Mallorie Brimmer, Jonathan S Chawla, Cassandra Craddock, Evan J Kyzar, Andrew Roth, Samuel Landsman,[...]. Zebrafish 2013
421
9

Use of Zebrafish in Drug Discovery Toxicology.
Steven Cassar, Isaac Adatto, Jennifer L Freeman, Joshua T Gamse, Iñaki Iturria, Christian Lawrence, Arantza Muriana, Randall T Peterson, Steven Van Cruchten, Leonard I Zon. Chem Res Toxicol 2020
68
13

Zebrafish as tools for drug discovery.
Calum A MacRae, Randall T Peterson. Nat Rev Drug Discov 2015
450
8

Animal models of human disease: zebrafish swim into view.
Graham J Lieschke, Peter D Currie. Nat Rev Genet 2007
7


Understanding behavioral and physiological phenotypes of stress and anxiety in zebrafish.
Rupert J Egan, Carisa L Bergner, Peter C Hart, Jonathan M Cachat, Peter R Canavello, Marco F Elegante, Salem I Elkhayat, Brett K Bartels, Anna K Tien, David H Tien,[...]. Behav Brain Res 2009
636
6

Zebrafish patient avatars in cancer biology and precision cancer therapy.
Maurizio Fazio, Julien Ablain, Yan Chuan, David M Langenau, Leonard I Zon. Nat Rev Cancer 2020
30
20

Effective targeted gene 'knockdown' in zebrafish.
A Nasevicius, S C Ekker. Nat Genet 2000
6

Drugs that induce repolarization abnormalities cause bradycardia in zebrafish.
David J Milan, Travis A Peterson, Jeremy N Ruskin, Randall T Peterson, Calum A MacRae. Circulation 2003
295
6

Zebrafish embryos as an alternative to animal experiments--a commentary on the definition of the onset of protected life stages in animal welfare regulations.
Uwe Strähle, Stefan Scholz, Robert Geisler, Petra Greiner, Henner Hollert, Sepand Rastegar, Axel Schumacher, Ingrid Selderslaghs, Carsten Weiss, Hilda Witters,[...]. Reprod Toxicol 2012
285
5

Zebrafish as a model vertebrate for investigating chemical toxicity.
Adrian J Hill, Hiroki Teraoka, Warren Heideman, Richard E Peterson. Toxicol Sci 2005
725
5

Zebrafish models for translational neuroscience research: from tank to bedside.
Adam Michael Stewart, Oliver Braubach, Jan Spitsbergen, Robert Gerlai, Allan V Kalueff. Trends Neurosci 2014
295
5


The zebrafish as a model for complex tissue regeneration.
Matthew Gemberling, Travis J Bailey, David R Hyde, Kenneth D Poss. Trends Genet 2013
269
5

Mammalian tumor xenografts induce neovascularization in zebrafish embryos.
Stefania Nicoli, Domenico Ribatti, Franco Cotelli, Marco Presta. Cancer Res 2007
187
4

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
684
4




The Zebrafish Visual System: From Circuits to Behavior.
Johann H Bollmann. Annu Rev Vis Sci 2019
15
26

The zebrafish embryo model in environmental risk assessment--applications beyond acute toxicity testing.
Stefan Scholz, Stephan Fischer, Ulrike Gündel, Eberhard Küster, Till Luckenbach, Doris Voelker. Environ Sci Pollut Res Int 2008
318
4

Acute inflammation initiates the regenerative response in the adult zebrafish brain.
Nikos Kyritsis, Caghan Kizil, Sara Zocher, Volker Kroehne, Jan Kaslin, Dorian Freudenreich, Anne Iltzsche, Michael Brand. Science 2012
296
4

Drinks like a fish: zebra fish (Danio rerio) as a behavior genetic model to study alcohol effects.
R Gerlai, M Lahav, S Guo, A Rosenthal. Pharmacol Biochem Behav 2000
431
4

Zebrafish Behavior: Opportunities and Challenges.
Michael B Orger, Gonzalo G de Polavieja. Annu Rev Neurosci 2017
75
5

A new and rapid colorimetric determination of acetylcholinesterase activity.
G L ELLMAN, K D COURTNEY, V ANDRES, R M FEATHER-STONE. Biochem Pharmacol 1961
4

Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
588
4

Locomotion in larval zebrafish: Influence of time of day, lighting and ethanol.
R C MacPhail, J Brooks, D L Hunter, B Padnos, T D Irons, S Padilla. Neurotoxicology 2009
227
4

Comparative embryotoxicity and proteotoxicity of three carrier solvents to zebrafish (Danio rerio) embryos.
Arnold Hallare, Kerstin Nagel, Heinz-R Köhler, Rita Triebskorn. Ecotoxicol Environ Saf 2006
147
4

Functional and developmental analysis of the blood-brain barrier in zebrafish.
Jae-Yeon Jeong, Hyouk-Bum Kwon, Jong-Chan Ahn, Dongmin Kang, Seung-Hae Kwon, Jeong Ae Park, Kyu-Won Kim. Brain Res Bull 2008
208
4

Regeneration of the adult zebrafish brain from neurogenic radial glia-type progenitors.
Volker Kroehne, Dorian Freudenreich, Stefan Hans, Jan Kaslin, Michael Brand. Development 2011
256
4

Guidelines for morpholino use in zebrafish.
Didier Y R Stainier, Erez Raz, Nathan D Lawson, Stephen C Ekker, Rebecca D Burdine, Judith S Eisen, Philip W Ingham, Stefan Schulte-Merker, Deborah Yelon, Brant M Weinstein,[...]. PLoS Genet 2017
150
4

Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
4

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
4

Zebrafish as a Model for Obesity and Diabetes.
Liqing Zang, Lisette A Maddison, Wenbiao Chen. Front Cell Dev Biol 2018
56
7

In vivo drug discovery in the zebrafish.
Leonard I Zon, Randall T Peterson. Nat Rev Drug Discov 2005
866
4

Evaluation of 14 organic solvents and carriers for screening applications in zebrafish embryos and larvae.
Jan Maes, Lien Verlooy, Olivia E Buenafe, Peter A M de Witte, Camila V Esguerra, Alexander D Crawford. PLoS One 2012
107
4

Measuring behavioral and endocrine responses to novelty stress in adult zebrafish.
Jonathan Cachat, Adam Stewart, Leah Grossman, Siddharth Gaikwad, Ferdous Kadri, Kyung Min Chung, Nadine Wu, Keith Wong, Sudipta Roy, Christopher Suciu,[...]. Nat Protoc 2010
311
3

Y-Maze memory task in zebrafish (Danio rerio): the role of glutamatergic and cholinergic systems on the acquisition and consolidation periods.
Giana de P Cognato, Josiane W Bortolotto, Ana R Blazina, Raíssa R Christoff, Diogo R Lara, Mônica R Vianna, Carla D Bonan. Neurobiol Learn Mem 2012
73
4


Development of the corticosteroid stress axis and receptor expression in zebrafish.
Derek Alsop, Mathilakath M Vijayan. Am J Physiol Regul Integr Comp Physiol 2008
236
3

The zebrafish/tumor xenograft angiogenesis assay.
Stefania Nicoli, Marco Presta. Nat Protoc 2007
159
3


Single-cell functional and chemosensitive profiling of combinatorial colorectal therapy in zebrafish xenografts.
Rita Fior, Vanda Póvoa, Raquel V Mendes, Tânia Carvalho, António Gomes, Nuno Figueiredo, Miguel Godinho Ferreira. Proc Natl Acad Sci U S A 2017
105
3

Studying the immune response to human viral infections using zebrafish.
Michelle F Goody, Con Sullivan, Carol H Kim. Dev Comp Immunol 2014
28
10


Development of a Patient-Derived Xenograft (PDX) of Breast Cancer Bone Metastasis in a Zebrafish Model.
Laura Mercatali, Federico La Manna, Arwin Groenewoud, Roberto Casadei, Federica Recine, Giacomo Miserocchi, Federica Pieri, Chiara Liverani, Alberto Bongiovanni, Chiara Spadazzi,[...]. Int J Mol Sci 2016
49
6

Whole-body cortisol response of zebrafish to acute net handling stress.
Jennifer M Ramsay, Grant W Feist, Zoltán M Varga, Monte Westerfield, Michael L Kent, Carl B Schreck. Aquaculture 2009
109
3

Optogenetic control of cardiac function.
Aristides B Arrenberg, Didier Y R Stainier, Herwig Baier, Jan Huisken. Science 2010
267
3


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.