A citation-based method for searching scientific literature

Ting Zheng, Zhongqing Yang, Anan Li, Xiaohua Lv, Zhenqiao Zhou, Xiaojun Wang, Xiaoli Qi, Shiwei Li, Qingming Luo, Hui Gong, Shaoqun Zeng. Opt Express 2013
Times Cited: 41







List of co-cited articles
294 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Micro-optical sectioning tomography to obtain a high-resolution atlas of the mouse brain.
Anan Li, Hui Gong, Bin Zhang, Qingdi Wang, Cheng Yan, Jingpeng Wu, Qian Liu, Shaoqun Zeng, Qingming Luo. Science 2010
237
68

Continuously tracing brain-wide long-distance axonal projections in mice at a one-micron voxel resolution.
Hui Gong, Shaoqun Zeng, Cheng Yan, Xiaohua Lv, Zhongqin Yang, Tonghui Xu, Zhao Feng, Wenxiang Ding, Xiaoli Qi, Anan Li,[...]. Neuroimage 2013
106
68

Serial two-photon tomography for automated ex vivo mouse brain imaging.
Timothy Ragan, Lolahon R Kadiri, Kannan Umadevi Venkataraju, Karsten Bahlmann, Jason Sutin, Julian Taranda, Ignacio Arganda-Carreras, Yongsoo Kim, H Sebastian Seung, Pavel Osten. Nat Methods 2012
318
63

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
41

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
685
36

High-throughput dual-colour precision imaging for brain-wide connectome with cytoarchitectonic landmarks at the cellular level.
Hui Gong, Dongli Xu, Jing Yuan, Xiangning Li, Congdi Guo, Jie Peng, Yuxin Li, Lindsay A Schwarz, Anan Li, Bihe Hu,[...]. Nat Commun 2016
111
36

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
633
34

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
650
31

Chemical reactivation of quenched fluorescent protein molecules enables resin-embedded fluorescence microimaging.
Hanqing Xiong, Zhenqiao Zhou, Mingqiang Zhu, Xiaohua Lv, Anan Li, Shiwei Li, Longhui Li, Tao Yang, Siming Wang, Zhongqin Yang,[...]. Nat Commun 2014
52
31

Mapping brain circuitry with a light microscope.
Pavel Osten, Troy W Margrie. Nat Methods 2013
135
29

NeuroGPS: automated localization of neurons for brain circuits using L1 minimization model.
Tingwei Quan, Ting Zheng, Zhongqing Yang, Wenxiang Ding, Shiwei Li, Jing Li, Hang Zhou, Qingming Luo, Hui Gong, Shaoqun Zeng. Sci Rep 2013
27
44

Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
516
29

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.
Hiroshi Hama, Hiroshi Kurokawa, Hiroyuki Kawano, Ryoko Ando, Tomomi Shimogori, Hisayori Noda, Kiyoko Fukami, Asako Sakaue-Sawano, Atsushi Miyawaki. Nat Neurosci 2011
719
29

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
183
29

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
26

Confocal light sheet microscopy: micron-scale neuroanatomy of the entire mouse brain.
L Silvestri, A Bria, L Sacconi, G Iannello, F S Pavone. Opt Express 2012
121
24

Development of a plastic embedding method for large-volume and fluorescent-protein-expressing tissues.
Zhongqin Yang, Bihe Hu, Yuhui Zhang, Qingming Luo, Hui Gong. PLoS One 2013
29
31


Advanced CLARITY for rapid and high-resolution imaging of intact tissues.
Raju Tomer, Li Ye, Brian Hsueh, Karl Deisseroth. Nat Protoc 2014
463
21

Single-cell phenotyping within transparent intact tissue through whole-body clearing.
Bin Yang, Jennifer B Treweek, Rajan P Kulkarni, Benjamin E Deverman, Chun-Kan Chen, Eric Lubeck, Sheel Shah, Long Cai, Viviana Gradinaru. Cell 2014
521
21


Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP.
G Feng, R H Mellor, M Bernstein, C Keller-Peck, Q T Nguyen, M Wallace, J M Nerbonne, J W Lichtman, J R Sanes. Neuron 2000
19

Modified Golgi-Cox method for micrometer scale sectioning of the whole mouse brain.
Bin Zhang, Anan Li, Zhongqin Yang, Jingpeng Wu, Qingming Luo, Hui Gong. J Neurosci Methods 2011
27
25

ClearT: a detergent- and solvent-free clearing method for neuronal and non-neuronal tissue.
Takaaki Kuwajima, Austen A Sitko, Punita Bhansali, Chris Jurgens, William Guido, Carol Mason. Development 2013
275
17

A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex.
Hiroki Taniguchi, Miao He, Priscilla Wu, Sangyong Kim, Raehum Paik, Ken Sugino, Duda Kvitsiani, Yu Fu, Jiangteng Lu, Ying Lin,[...]. Neuron 2011
993
17

Clarifying Tissue Clearing.
Douglas S Richardson, Jeff W Lichtman. Cell 2015
546
17

High-Speed and Scalable Whole-Brain Imaging in Rodents and Primates.
Kaoru Seiriki, Atsushi Kasai, Takeshi Hashimoto, Wiebke Schulze, Misaki Niu, Shun Yamaguchi, Takanobu Nakazawa, Ken-Ichi Inoue, Shiori Uezono, Masahiko Takada,[...]. Neuron 2017
45
17



Neural networks of the mouse neocortex.
Brian Zingg, Houri Hintiryan, Lin Gou, Monica Y Song, Maxwell Bay, Michael S Bienkowski, Nicholas N Foster, Seita Yamashita, Ian Bowman, Arthur W Toga,[...]. Cell 2014
361
14

Correlations of neuronal and microvascular densities in murine cortex revealed by direct counting and colocalization of nuclei and vessels.
Philbert S Tsai, John P Kaufhold, Pablo Blinder, Beth Friedman, Patrick J Drew, Harvey J Karten, Patrick D Lyden, David Kleinfeld. J Neurosci 2009
311
14

Genetic approaches to neural circuits in the mouse.
Z Josh Huang, Hongkui Zeng. Annu Rev Neurosci 2013
123
14

CLARITY for mapping the nervous system.
Kwanghun Chung, Karl Deisseroth. Nat Methods 2013
396
14

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
14

Visible rodent brain-wide networks at single-neuron resolution.
Jing Yuan, Hui Gong, Anan Li, Xiangning Li, Shangbin Chen, Shaoqun Zeng, Qingming Luo. Front Neuroanat 2015
21
28

NeuroGPS-Tree: automatic reconstruction of large-scale neuronal populations with dense neurites.
Tingwei Quan, Hang Zhou, Jing Li, Shiwei Li, Anan Li, Yuxin Li, Xiaohua Lv, Qingming Luo, Hui Gong, Shaoqun Zeng. Nat Methods 2016
51
14

Computational methods and challenges for large-scale circuit mapping.
Moritz Helmstaedter, Partha P Mitra. Curr Opin Neurobiol 2012
45
12

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets.
Hanchuan Peng, Zongcai Ruan, Fuhui Long, Julie H Simpson, Eugene W Myers. Nat Biotechnol 2010
359
12

Imaging cleared intact biological systems at a cellular level by 3DISCO.
Ali Ertürk, Daniel Lafkas, Cecile Chalouni. J Vis Exp 2014
44
12

Three-dimensional imaging of the unsectioned adult spinal cord to assess axon regeneration and glial responses after injury.
Ali Ertürk, Christoph P Mauch, Farida Hellal, Friedrich Förstner, Tara Keck, Klaus Becker, Nina Jährling, Heinz Steffens, Melanie Richter, Mark Hübener,[...]. Nat Med 2011
213
12

3D BrainCV: simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution.
Jingpeng Wu, Yong He, Zhongqin Yang, Congdi Guo, Qingming Luo, Wei Zhou, Shangbin Chen, Anan Li, Benyi Xiong, Tao Jiang,[...]. Neuroimage 2014
57
12

Genetic dissection of neural circuits.
Liqun Luo, Edward M Callaway, Karel Svoboda. Neuron 2008
513
12

Neuron tracing in perspective.
Erik Meijering. Cytometry A 2010
185
12

Mapping social behavior-induced brain activation at cellular resolution in the mouse.
Yongsoo Kim, Kannan Umadevi Venkataraju, Kith Pradhan, Carolin Mende, Julian Taranda, Srinivas C Turaga, Ignacio Arganda-Carreras, Lydia Ng, Michael J Hawrylycz, Kathleen S Rockland,[...]. Cell Rep 2015
154
12

Optical sectioning deep inside live embryos by selective plane illumination microscopy.
Jan Huisken, Jim Swoger, Filippo Del Bene, Joachim Wittbrodt, Ernst H K Stelzer. Science 2004
12

Retrograde neuronal tracing with a deletion-mutant rabies virus.
Ian R Wickersham, Stefan Finke, Karl-Klaus Conzelmann, Edward M Callaway. Nat Methods 2007
396
12

Stochastic electrotransport selectively enhances the transport of highly electromobile molecules.
Sung-Yon Kim, Jae Hun Cho, Evan Murray, Naveed Bakh, Heejin Choi, Kimberly Ohn, Luzdary Ruelas, Austin Hubbert, Meg McCue, Sara L Vassallo,[...]. Proc Natl Acad Sci U S A 2015
98
12

Whole-body imaging with single-cell resolution by tissue decolorization.
Kazuki Tainaka, Shimpei I Kubota, Takeru Q Suyama, Etsuo A Susaki, Dimitri Perrin, Maki Ukai-Tadenuma, Hideki Ukai, Hiroki R Ueda. Cell 2014
251
12

Chemical clearing and dehydration of GFP expressing mouse brains.
Klaus Becker, Nina Jährling, Saiedeh Saghafi, Reto Weiler, Hans-Ulrich Dodt. PLoS One 2012
174
12

Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems.
Evan Murray, Jae Hun Cho, Daniel Goodwin, Taeyun Ku, Justin Swaney, Sung-Yon Kim, Heejin Choi, Young-Gyun Park, Jeong-Yoon Park, Austin Hubbert,[...]. Cell 2015
204
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.