A citation-based method for searching scientific literature

Tatiana Popova, Lucie Hebert, Virginie Jacquemin, Sophie Gad, Virginie Caux-Moncoutier, Catherine Dubois-d'Enghien, Bénédicte Richaudeau, Xavier Renaudin, Jason Sellers, André Nicolas, Xavier Sastre-Garau, Laurence Desjardins, Gabor Gyapay, Virginie Raynal, Olga M Sinilnikova, Nadine Andrieu, Elodie Manié, Antoine de Pauw, Paul Gesta, Valérie Bonadona, Christine M Maugard, Clotilde Penet, Marie-Françoise Avril, Emmanuel Barillot, Odile Cabaret, Olivier Delattre, Stéphane Richard, Olivier Caron, Meriem Benfodda, Hui-Han Hu, Nadem Soufir, Brigitte Bressac-de Paillerets, Dominique Stoppa-Lyonnet, Marc-Henri Stern. Am J Hum Genet 2013
Times Cited: 178







List of co-cited articles
752 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Germline BAP1 mutations predispose to malignant mesothelioma.
Joseph R Testa, Mitchell Cheung, Jianming Pei, Jennifer E Below, Yinfei Tan, Eleonora Sementino, Nancy J Cox, A Umran Dogan, Harvey I Pass, Sandra Trusa,[...]. Nat Genet 2011
626
73

Germline mutations in BAP1 predispose to melanocytic tumors.
Thomas Wiesner, Anna C Obenauf, Rajmohan Murali, Isabella Fried, Klaus G Griewank, Peter Ulz, Christian Windpassinger, Werner Wackernagel, Shea Loy, Ingrid Wolf,[...]. Nat Genet 2011
462
64

Germline BAP1 mutation predisposes to uveal melanoma, lung adenocarcinoma, meningioma, and other cancers.
Mohamed H Abdel-Rahman, Robert Pilarski, Colleen M Cebulla, James B Massengill, Benjamin N Christopher, Getachew Boru, Peter Hovland, Frederick H Davidorf. J Med Genet 2011
299
53

Frequent mutation of BAP1 in metastasizing uveal melanomas.
J William Harbour, Michael D Onken, Elisha D O Roberson, Shenghui Duan, Li Cao, Lori A Worley, M Laurin Council, Katie A Matatall, Cynthia Helms, Anne M Bowcock. Science 2010
882
46

BAP1 loss defines a new class of renal cell carcinoma.
Samuel Peña-Llopis, Silvia Vega-Rubín-de-Celis, Arnold Liao, Nan Leng, Andrea Pavía-Jiménez, Shanshan Wang, Toshinari Yamasaki, Leah Zhrebker, Sharanya Sivanand, Patrick Spence,[...]. Nat Genet 2012
594
40

Comprehensive review of BAP1 tumor predisposition syndrome with report of two new cases.
K Rai, R Pilarski, C M Cebulla, M H Abdel-Rahman. Clin Genet 2016
118
34

A novel germline mutation in BAP1 predisposes to familial clear-cell renal cell carcinoma.
Megan N Farley, Laura S Schmidt, Jessica L Mester, Samuel Pena-Llopis, Andrea Pavia-Jimenez, Alana Christie, Cathy D Vocke, Christopher J Ricketts, James Peterson, Lindsay Middelton,[...]. Mol Cancer Res 2013
105
32

BAP1 and cancer.
Michele Carbone, Haining Yang, Harvey I Pass, Thomas Krausz, Joseph R Testa, Giovanni Gaudino. Nat Rev Cancer 2013
385
31

BAP1 cancer syndrome: malignant mesothelioma, uveal and cutaneous melanoma, and MBAITs.
Michele Carbone, Laura Korb Ferris, Francine Baumann, Andrea Napolitano, Christopher A Lum, Erin G Flores, Giovanni Gaudino, Amy Powers, Peter Bryant-Greenwood, Thomas Krausz,[...]. J Transl Med 2012
190
30

Germline BAP1 inactivation is preferentially associated with metastatic ocular melanoma and cutaneous-ocular melanoma families.
Ching-Ni Jenny Njauw, Ivana Kim, Adriano Piris, Michele Gabree, Michael Taylor, Anne Marie Lane, Margaret M DeAngelis, Evangelos Gragoudas, Lyn M Duncan, Hensin Tsao. PLoS One 2012
171
29

Comprehensive Study of the Clinical Phenotype of Germline BAP1 Variant-Carrying Families Worldwide.
Sebastian Walpole, Antonia L Pritchard, Colleen M Cebulla, Robert Pilarski, Meredith Stautberg, Frederick H Davidorf, Arnaud de la Fouchardière, Odile Cabaret, Lisa Golmard, Dominique Stoppa-Lyonnet,[...]. J Natl Cancer Inst 2018
90
32

BAP1: a novel ubiquitin hydrolase which binds to the BRCA1 RING finger and enhances BRCA1-mediated cell growth suppression.
D E Jensen, M Proctor, S T Marquis, H P Gardner, S I Ha, L A Chodosh, A M Ishov, N Tommerup, H Vissing, Y Sekido,[...]. Oncogene 1998
507
28

Expanding the clinical phenotype of hereditary BAP1 cancer predisposition syndrome, reporting three new cases.
Robert Pilarski, Colleen M Cebulla, James B Massengill, Karan Rai, Thereasa Rich, Louise Strong, Barbara McGillivray, Mary-Jill Asrat, Frederick H Davidorf, Mohamed H Abdel-Rahman. Genes Chromosomes Cancer 2014
83
31

A recurrent germline BAP1 mutation and extension of the BAP1 tumor predisposition spectrum to include basal cell carcinoma.
K A W Wadt, L G Aoude, P Johansson, A Solinas, A Pritchard, O Crainic, M T Andersen, J F Kiilgaard, S Heegaard, L Sunde,[...]. Clin Genet 2015
66
37

Tumor suppressor and deubiquitinase BAP1 promotes DNA double-strand break repair.
Helen Yu, Helen Pak, Ian Hammond-Martel, Mehdi Ghram, Amélie Rodrigue, Salima Daou, Haithem Barbour, Luc Corbeil, Josée Hébert, Elliot Drobetsky,[...]. Proc Natl Acad Sci U S A 2014
212
22

The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma.
Matthew Bott, Marie Brevet, Barry S Taylor, Shigeki Shimizu, Tatsuo Ito, Lu Wang, Jenette Creaney, Richard A Lake, Maureen F Zakowski, Boris Reva,[...]. Nat Genet 2011
450
22

Minimal asbestos exposure in germline BAP1 heterozygous mice is associated with deregulated inflammatory response and increased risk of mesothelioma.
A Napolitano, L Pellegrini, A Dey, D Larson, M Tanji, E G Flores, B Kendrick, D Lapid, A Powers, S Kanodia,[...]. Oncogene 2016
101
21

Germline BAP1 mutations predispose also to multiple basal cell carcinomas.
A de la Fouchardière, O Cabaret, L Savin, P Combemale, H Schvartz, C Penet, V Bonadona, N Soufir, B Bressac-de Paillerets. Clin Genet 2015
67
29

Mesothelioma patients with germline BAP1 mutations have 7-fold improved long-term survival.
Francine Baumann, Erin Flores, Andrea Napolitano, Shreya Kanodia, Emanuela Taioli, Harvey Pass, Haining Yang, Michele Carbone. Carcinogenesis 2015
138
20

Germline BAP1 Mutational Landscape of Asbestos-Exposed Malignant Mesothelioma Patients with Family History of Cancer.
Jill A Ohar, Mitchell Cheung, Jacqueline Talarchek, Suzanne E Howard, Timothy D Howard, Mary Hesdorffer, Hongzhuang Peng, Frank J Rauscher, Joseph R Testa. Cancer Res 2016
61
29

Germline mutations in BAP1 impair its function in DNA double-strand break repair.
Ismail Hassan Ismail, Riley Davidson, Jean-Philippe Gagné, Zhi Zhong Xu, Guy G Poirier, Michael J Hendzel. Cancer Res 2014
119
18

BAP1 regulates IP3R3-mediated Ca2+ flux to mitochondria suppressing cell transformation.
Angela Bononi, Carlotta Giorgi, Simone Patergnani, David Larson, Kaitlyn Verbruggen, Mika Tanji, Laura Pellegrini, Valentina Signorato, Federica Olivetto, Sandra Pastorino,[...]. Nature 2017
197
18

BRCA1-associated protein-1 is a tumor suppressor that requires deubiquitinating activity and nuclear localization.
Karen H Ventii, Narra S Devi, Kenneth L Friedrich, Tatiana A Chernova, Mourad Tighiouart, Erwin G Van Meir, Keith D Wilkinson. Cancer Res 2008
231
17

Clinical Characteristics of Uveal Melanoma in Patients With Germline BAP1 Mutations.
Mrinali P Gupta, Anne Marie Lane, Margaret M DeAngelis, Katie Mayne, Margaux Crabtree, Evangelos S Gragoudas, Ivana K Kim. JAMA Ophthalmol 2015
71
23

Combined Genetic and Genealogic Studies Uncover a Large BAP1 Cancer Syndrome Kindred Tracing Back Nine Generations to a Common Ancestor from the 1700s.
Michele Carbone, Erin G Flores, Mitsuru Emi, Todd A Johnson, Tatsuhiko Tsunoda, Dusty Behner, Harriet Hoffman, Mary Hesdorffer, Masaki Nasu, Andrea Napolitano,[...]. PLoS Genet 2015
57
29

Loss of the tumor suppressor BAP1 causes myeloid transformation.
Anwesha Dey, Dhaya Seshasayee, Rajkumar Noubade, Dorothy M French, Jinfeng Liu, Mira S Chaurushiya, Donald S Kirkpatrick, Victoria C Pham, Jennie R Lill, Corey E Bakalarski,[...]. Science 2012
273
16

Toward an improved definition of the tumor spectrum associated with BAP1 germline mutations.
Thomas Wiesner, Isabella Fried, Peter Ulz, Elvira Stacher, Helmut Popper, Rajmohan Murali, Heinz Kutzner, Sigurd Lax, Freya Smolle-Jüttner, Jochen B Geigl,[...]. J Clin Oncol 2012
71
21

A distinct subset of atypical Spitz tumors is characterized by BRAF mutation and loss of BAP1 expression.
Thomas Wiesner, Rajmohan Murali, Isabella Fried, Lorenzo Cerroni, Klaus Busam, Heinz Kutzner, Boris C Bastian. Am J Surg Pathol 2012
175
15

Histone H2A deubiquitinase activity of the Polycomb repressive complex PR-DUB.
Johanna C Scheuermann, Andrés Gaytán de Ayala Alonso, Katarzyna Oktaba, Nga Ly-Hartig, Robert K McGinty, Sven Fraterman, Matthias Wilm, Tom W Muir, Jürg Müller. Nature 2010
503
15

Genotypic and Phenotypic Features of BAP1 Cancer Syndrome: A Report of 8 New Families and Review of Cases in the Literature.
Alexandra M Haugh, Ching-Ni Njauw, Jeffrey A Bubley, Anna Elisa Verzì, Bin Zhang, Emily Kudalkar, Timothy VandenBoom, Kara Walton, Brian L Swick, Raj Kumar,[...]. JAMA Dermatol 2017
50
30

A cryptic BAP1 splice mutation in a family with uveal and cutaneous melanoma, and paraganglioma.
Karin Wadt, Jiyeon Choi, Joon-Yong Chung, Jens Kiilgaard, Steffen Heegaard, Krzysztof T Drzewiecki, Jeffrey M Trent, Stephen M Hewitt, Nicholas K Hayward, Anne-Marie Gerdes,[...]. Pigment Cell Melanoma Res 2012
86
16

High Incidence of Somatic BAP1 alterations in sporadic malignant mesothelioma.
Masaki Nasu, Mitsuru Emi, Sandra Pastorino, Mika Tanji, Amy Powers, Hugh Luk, Francine Baumann, Yu-An Zhang, Adi Gazdar, Shreya Kanodia,[...]. J Thorac Oncol 2015
180
14

BAP1 Germline Mutations in Finnish Patients with Uveal Melanoma.
Joni A Turunen, Salla Markkinen, Rosi Wilska, Silva Saarinen, Virpi Raivio, Martin Täll, Anna-Elina Lehesjoki, Tero T Kivelä. Ophthalmology 2016
28
50

Bap1 Is a Bona Fide Tumor Suppressor: Genetic Evidence from Mouse Models Carrying Heterozygous Germline Bap1 Mutations.
Yuwaraj Kadariya, Mitchell Cheung, Jinfei Xu, Jianming Pei, Eleonora Sementino, Craig W Menges, Kathy Q Cai, Frank J Rauscher, Andres J Klein-Szanto, Joseph R Testa. Cancer Res 2016
61
22

Germline mutation of Bap1 accelerates development of asbestos-induced malignant mesothelioma.
Jinfei Xu, Yuwaraj Kadariya, Mitchell Cheung, Jianming Pei, Jacqueline Talarchek, Eleonora Sementino, Yinfei Tan, Craig W Menges, Kathy Q Cai, Samuel Litwin,[...]. Cancer Res 2014
88
15

Germline BAP1 mutations induce a Warburg effect.
Angela Bononi, Haining Yang, Carlotta Giorgi, Simone Patergnani, Laura Pellegrini, Mingming Su, Guoxiang Xie, Valentina Signorato, Sandra Pastorino, Paul Morris,[...]. Cell Death Differ 2017
68
20

The ubiquitin carboxyl hydrolase BAP1 forms a ternary complex with YY1 and HCF-1 and is a critical regulator of gene expression.
Helen Yu, Nazar Mashtalir, Salima Daou, Ian Hammond-Martel, Julie Ross, Guangchao Sui, Gerald W Hart, Frank J Rauscher, Elliot Drobetsky, Eric Milot,[...]. Mol Cell Biol 2010
176
13

Effects on survival of BAP1 and PBRM1 mutations in sporadic clear-cell renal-cell carcinoma: a retrospective analysis with independent validation.
Payal Kapur, Samuel Peña-Llopis, Alana Christie, Leah Zhrebker, Andrea Pavía-Jiménez, W Kimryn Rathmell, Xian-Jin Xie, James Brugarolas. Lancet Oncol 2013
294
13

Prevalence of germline BAP1 mutation in a population-based sample of uveal melanoma cases.
Lauren G Aoude, Claire M Vajdic, Anne Kricker, Bruce Armstrong, Nicholas K Hayward. Pigment Cell Melanoma Res 2013
43
27

Further evidence for germline BAP1 mutations predisposing to melanoma and malignant mesothelioma.
Mitchell Cheung, Jacqueline Talarchek, Karen Schindeler, Eduardo Saraiva, Lynette S Penney, Mark Ludman, Joseph R Testa. Cancer Genet 2013
60
20

Exome sequencing identifies frequent inactivating mutations in BAP1, ARID1A and PBRM1 in intrahepatic cholangiocarcinomas.
Yuchen Jiao, Timothy M Pawlik, Robert A Anders, Florin M Selaru, Mirte M Streppel, Donald J Lucas, Noushin Niknafs, Violeta Beleva Guthrie, Anirban Maitra, Pedram Argani,[...]. Nat Genet 2013
443
12

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
12

The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1.
Yuichi J Machida, Yuka Machida, Ajay A Vashisht, James A Wohlschlegel, Anindya Dutta. J Biol Chem 2009
175
12

BAP1 hereditary cancer predisposition syndrome: a case report and review of literature.
Sonja Klebe, Jack Driml, Masaki Nasu, Sandra Pastorino, Amirmasoud Zangiabadi, Douglas Henderson, Michele Carbone. Biomark Res 2015
32
37

CDKN2A and BAP1 germline mutations predispose to melanoma and mesothelioma.
M Betti, A Aspesi, A Biasi, E Casalone, D Ferrante, P Ogliara, L C Gironi, R Giorgione, P Farinelli, F Grosso,[...]. Cancer Lett 2016
47
25

Germline BAP1 mutation in a family with high incidence of multiple primary cancers and a potential gene-environment interaction.
Mitchell Cheung, Yuwaraj Kadariya, Jacqueline Talarchek, Jianming Pei, Jill A Ohar, Omar R Kayaleh, Joseph R Testa. Cancer Lett 2015
31
38

Frequency of Germline Mutations in Cancer Susceptibility Genes in Malignant Mesothelioma.
Vasiliki Panou, Meghana Gadiraju, Arthur Wolin, Caroline M Weipert, Emily Skarda, Aliya N Husain, Jyoti D Patel, Buerkley Rose, Shannon R Zhang, Madison Weatherly,[...]. J Clin Oncol 2018
82
14

Inference on germline BAP1 mutations and asbestos exposure from the analysis of familial and sporadic mesothelioma in a high-risk area.
Marta Betti, Elisabetta Casalone, Daniela Ferrante, Antonio Romanelli, Federica Grosso, Simonetta Guarrera, Luisella Righi, Simona Vatrano, Giuseppe Pelosi, Roberta Libener,[...]. Genes Chromosomes Cancer 2015
43
25

A BAP1 mutation in a Danish family predisposes to uveal melanoma and other cancers.
Lauren G Aoude, Karin Wadt, Anders Bojesen, Dorthe Crüger, Ake Borg, Jeffrey M Trent, Kevin M Brown, Anne-Marie Gerdes, Göran Jönsson, Nicholas K Hayward. PLoS One 2013
46
23

Renal tumors in the Birt-Hogg-Dubé syndrome.
Christian P Pavlovich, McClellan M Walther, Robin A Eyler, Stephen M Hewitt, Berton Zbar, W Marston Linehan, Maria J Merino. Am J Surg Pathol 2002
366
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.