A citation-based method for searching scientific literature

Nicholas L Adkins, Hengyao Niu, Patrick Sung, Craig L Peterson. Nat Struct Mol Biol 2013
Times Cited: 96







List of co-cited articles
1540 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The Fun30 nucleosome remodeller promotes resection of DNA double-strand break ends.
Xuefeng Chen, Dandan Cui, Alma Papusha, Xiaotian Zhang, Chia-Dwo Chu, Jiangwu Tang, Kaifu Chen, Xuewen Pan, Grzegorz Ira. Nature 2012
176
43

The yeast Fun30 and human SMARCAD1 chromatin remodellers promote DNA end resection.
Thomas Costelloe, Raphaël Louge, Nozomi Tomimatsu, Bipasha Mukherjee, Emmanuelle Martini, Basheer Khadaroo, Kenny Dubois, Wouter W Wiegant, Agnès Thierry, Sandeep Burma,[...]. Nature 2012
190
40

Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.
Zhu Zhu, Woo-Hyun Chung, Eun Yong Shim, Sang Eun Lee, Grzegorz Ira. Cell 2008
768
39

Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing.
Eleni P Mimitou, Lorraine S Symington. Nature 2008
740
37

Mechanism of the ATP-dependent DNA end-resection machinery from Saccharomyces cerevisiae.
Hengyao Niu, Woo-Hyun Chung, Zhu Zhu, Youngho Kwon, Weixing Zhao, Peter Chi, Rohit Prakash, Changhyun Seong, Dongqing Liu, Lucy Lu,[...]. Nature 2010
282
31


DNA end resection by Dna2-Sgs1-RPA and its stimulation by Top3-Rmi1 and Mre11-Rad50-Xrs2.
Petr Cejka, Elda Cannavo, Piotr Polaczek, Taro Masuda-Sasa, Subhash Pokharel, Judith L Campbell, Stephen C Kowalczykowski. Nature 2010
333
28

The Saccharomyces cerevisiae chromatin remodeler Fun30 regulates DNA end resection and checkpoint deactivation.
Vinay V Eapen, Neal Sugawara, Michael Tsabar, Wei-Hua Wu, James E Haber. Mol Cell Biol 2012
110
27

BLM-DNA2-RPA-MRN and EXO1-BLM-RPA-MRN constitute two DNA end resection machineries for human DNA break repair.
Amitabh V Nimonkar, Jochen Genschel, Eri Kinoshita, Piotr Polaczek, Judith L Campbell, Claire Wyman, Paul Modrich, Stephen C Kowalczykowski. Genes Dev 2011
477
25


Double-strand break end resection and repair pathway choice.
Lorraine S Symington, Jean Gautier. Annu Rev Genet 2011
960
23

53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks.
Samuel F Bunting, Elsa Callén, Nancy Wong, Hua-Tang Chen, Federica Polato, Amanda Gunn, Anne Bothmer, Niklas Feldhahn, Oscar Fernandez-Capetillo, Liu Cao,[...]. Cell 2010
21

Histone H2A.Z controls a critical chromatin remodeling step required for DNA double-strand break repair.
Ye Xu, Marina K Ayrapetov, Chang Xu, Ozge Gursoy-Yuzugullu, Yiduo Hu, Brendan D Price. Mol Cell 2012
210
21


RSC mobilizes nucleosomes to improve accessibility of repair machinery to the damaged chromatin.
Eun Yong Shim, Soo Jin Hong, Ji-Hyun Oum, Yvonne Yanez, Yu Zhang, Sang Eun Lee. Mol Cell Biol 2007
135
21


Chromatin remodelling at a DNA double-strand break site in Saccharomyces cerevisiae.
Toyoko Tsukuda, Alastair B Fleming, Jac A Nickoloff, Mary Ann Osley. Nature 2005
336
20

Bidirectional resection of DNA double-strand breaks by Mre11 and Exo1.
Valerie Garcia, Sarah E L Phelps, Stephen Gray, Matthew J Neale. Nature 2011
275
20


Saccharomyces cerevisiae Mre11/Rad50/Xrs2 and Ku proteins regulate association of Exo1 and Dna2 with DNA breaks.
Eun Yong Shim, Woo-Hyun Chung, Matthew L Nicolette, Yu Zhang, Melody Davis, Zhu Zhu, Tanya T Paull, Grzegorz Ira, Sang Eun Lee. EMBO J 2010
166
18

DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1.
Grzegorz Ira, Achille Pellicioli, Alitukiriza Balijja, Xuan Wang, Simona Fiorani, Walter Carotenuto, Giordano Liberi, Debra Bressan, Lihong Wan, Nancy M Hollingsworth,[...]. Nature 2004
546
18

Human CtIP promotes DNA end resection.
Alessandro A Sartori, Claudia Lukas, Julia Coates, Martin Mistrik, Shuang Fu, Jiri Bartek, Richard Baer, Jiri Lukas, Stephen P Jackson. Nature 2007
950
18

53BP1 is a reader of the DNA-damage-induced H2A Lys 15 ubiquitin mark.
Amélie Fradet-Turcotte, Marella D Canny, Cristina Escribano-Díaz, Alexandre Orthwein, Charles C Y Leung, Hao Huang, Marie-Claude Landry, Julianne Kitevski-LeBlanc, Sylvie M Noordermeer, Frank Sicheri,[...]. Nature 2013
450
18

Histone methyltransferase Dot1 and Rad9 inhibit single-stranded DNA accumulation at DSBs and uncapped telomeres.
Federico Lazzaro, Vasileia Sapountzi, Magda Granata, Achille Pellicioli, Moreshwar Vaze, James E Haber, Paolo Plevani, David Lydall, Marco Muzi-Falconi. EMBO J 2008
143
17

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
17

Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins.
Michael Lisby, Jacqueline H Barlow, Rebecca C Burgess, Rodney Rothstein. Cell 2004
707
17


A global view of meiotic double-strand break end resection.
Eleni P Mimitou, Shintaro Yamada, Scott Keeney. Science 2017
86
19

A cell cycle-dependent regulatory circuit composed of 53BP1-RIF1 and BRCA1-CtIP controls DNA repair pathway choice.
Cristina Escribano-Díaz, Alexandre Orthwein, Amélie Fradet-Turcotte, Mengtan Xing, Jordan T F Young, Ján Tkáč, Michael A Cook, Adam P Rosebrock, Meagan Munro, Marella D Canny,[...]. Mol Cell 2013
587
16

CDK targets Sae2 to control DNA-end resection and homologous recombination.
Pablo Huertas, Felipe Cortés-Ledesma, Alessandro A Sartori, Andrés Aguilera, Stephen P Jackson. Nature 2008
342
16

RPA coordinates DNA end resection and prevents formation of DNA hairpins.
Huan Chen, Michael Lisby, Lorraine S Symington. Mol Cell 2013
157
15

Mre11-Rad50-Xrs2 and Sae2 promote 5' strand resection of DNA double-strand breaks.
Matthew L Nicolette, Kihoon Lee, Zhi Guo, Mridula Rani, Julia M Chow, Sang Eun Lee, Tanya T Paull. Nat Struct Mol Biol 2010
166
15

DNA helicases Sgs1 and BLM promote DNA double-strand break resection.
Serge Gravel, J Ross Chapman, Christine Magill, Stephen P Jackson. Genes Dev 2008
440
15


The SWR1 histone replacement complex causes genetic instability and genome-wide transcription misregulation in the absence of H2A.Z.
Macarena Morillo-Huesca, Marta Clemente-Ruiz, Eloísa Andújar, Félix Prado. PLoS One 2010
74
18

DNA double-strand break repair pathway choice is directed by distinct MRE11 nuclease activities.
Atsushi Shibata, Davide Moiani, Andrew S Arvai, Jefferson Perry, Shane M Harding, Marie-Michelle Genois, Ranjan Maity, Sari van Rossum-Fikkert, Aryandi Kertokalio, Filippo Romoli,[...]. Mol Cell 2014
364
14


DNA repair choice defines a common pathway for recruitment of chromatin regulators.
Gwendolyn Bennett, Manolis Papamichos-Chronakis, Craig L Peterson. Nat Commun 2013
65
21


The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
14

INO80 and gamma-H2AX interaction links ATP-dependent chromatin remodeling to DNA damage repair.
Ashby J Morrison, Jessica Highland, Nevan J Krogan, Ayelet Arbel-Eden, Jack F Greenblatt, James E Haber, Xuetong Shen. Cell 2004
427
14

Human BRCA1-BARD1 ubiquitin ligase activity counteracts chromatin barriers to DNA resection.
Ruth M Densham, Alexander J Garvin, Helen R Stone, Joanna Strachan, Robert A Baldock, Manuel Daza-Martin, Alice Fletcher, Sarah Blair-Reid, James Beesley, Balraj Johal,[...]. Nat Struct Mol Biol 2016
161
14


53BP1 regulates DSB repair using Rif1 to control 5' end resection.
Michal Zimmermann, Francisca Lottersberger, Sara B Buonomo, Agnel Sfeir, Titia de Lange. Science 2013
411
13

Saccharomyces Ku70, mre11/rad50 and RPA proteins regulate adaptation to G2/M arrest after DNA damage.
S E Lee, J K Moore, A Holmes, K Umezu, R D Kolodner, J E Haber. Cell 1998
615
13

Distribution and dynamics of chromatin modification induced by a defined DNA double-strand break.
Robert Shroff, Ayelet Arbel-Eden, Duane Pilch, Grzegorz Ira, William M Bonner, John H Petrini, James E Haber, Michael Lichten. Curr Biol 2004
371
13

Sources of DNA double-strand breaks and models of recombinational DNA repair.
Anuja Mehta, James E Haber. Cold Spring Harb Perspect Biol 2014
407
13

Double-strand break repair: 53BP1 comes into focus.
Stephanie Panier, Simon J Boulton. Nat Rev Mol Cell Biol 2014
645
13

Mechanism and regulation of DNA end resection in eukaryotes.
Lorraine S Symington. Crit Rev Biochem Mol Biol 2016
231
13

Cell cycle regulation of DNA double-strand break end resection by Cdk1-dependent Dna2 phosphorylation.
Xuefeng Chen, Hengyao Niu, Woo-Hyun Chung, Zhu Zhu, Alma Papusha, Eun Yong Shim, Sang Eun Lee, Patrick Sung, Grzegorz Ira. Nat Struct Mol Biol 2011
131
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.