A citation-based method for searching scientific literature

Dawen Cai, Kimberly B Cohen, Tuanlian Luo, Jeff W Lichtman, Joshua R Sanes. Nat Methods 2013
Times Cited: 226







List of co-cited articles
790 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system.
Jean Livet, Tamily A Weissman, Hyuno Kang, Ryan W Draft, Ju Lu, Robyn A Bennis, Joshua R Sanes, Jeff W Lichtman. Nature 2007
45

Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems.
Ken Y Chan, Min J Jang, Bryan B Yoo, Alon Greenbaum, Namita Ravi, Wei-Li Wu, Luis Sánchez-Guardado, Carlos Lois, Sarkis K Mazmanian, Benjamin E Deverman,[...]. Nat Neurosci 2017
319
15

Multiplex cell and lineage tracking with combinatorial labels.
Karine Loulier, Raphaëlle Barry, Pierre Mahou, Yann Le Franc, Willy Supatto, Katherine S Matho, Siohoi Ieng, Stéphane Fouquet, Elisabeth Dupin, Ryad Benosman,[...]. Neuron 2014
89
16

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
14

Intestinal crypt homeostasis results from neutral competition between symmetrically dividing Lgr5 stem cells.
Hugo J Snippert, Laurens G van der Flier, Toshiro Sato, Johan H van Es, Maaike van den Born, Carla Kroon-Veenboer, Nick Barker, Allon M Klein, Jacco van Rheenen, Benjamin D Simons,[...]. Cell 2010
14

Zebrabow: multispectral cell labeling for cell tracing and lineage analysis in zebrafish.
Y Albert Pan, Tom Freundlich, Tamily A Weissman, David Schoppik, X Cindy Wang, Steve Zimmerman, Brian Ciruna, Joshua R Sanes, Jeff W Lichtman, Alexander F Schier. Development 2013
172
11

Optical imaging. Expansion microscopy.
Fei Chen, Paul W Tillberg, Edward S Boyden. Science 2015
452
10

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
10

RGB marking facilitates multicolor clonal cell tracking.
Kristoffer Weber, Michael Thomaschewski, Michael Warlich, Tassilo Volz, Kerstin Cornils, Birte Niebuhr, Maike Täger, Marc Lütgehetmann, Jörg-Matthias Pollok, Carol Stocking,[...]. Nat Med 2011
95
10

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
601
10

Clarifying Tissue Clearing.
Douglas S Richardson, Jeff W Lichtman. Cell 2015
513
9

Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies.
Paul W Tillberg, Fei Chen, Kiryl D Piatkevich, Yongxin Zhao, Chih-Chieh Jay Yu, Brian P English, Linyi Gao, Anthony Martorell, Ho-Jun Suk, Fumiaki Yoshida,[...]. Nat Biotechnol 2016
191
9

Whole-organism lineage tracing by combinatorial and cumulative genome editing.
Aaron McKenna, Gregory M Findlay, James A Gagnon, Marshall S Horwitz, Alexander F Schier, Jay Shendure. Science 2016
302
9

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
415
8

mGRASP enables mapping mammalian synaptic connectivity with light microscopy.
Jinhyun Kim, Ting Zhao, Ronald S Petralia, Yang Yu, Hanchuan Peng, Eugene Myers, Jeffrey C Magee. Nat Methods 2011
148
8

High-Throughput Mapping of Single-Neuron Projections by Sequencing of Barcoded RNA.
Justus M Kebschull, Pedro Garcia da Silva, Ashlan P Reid, Ian D Peikon, Dinu F Albeanu, Anthony M Zador. Neuron 2016
112
8


AAV-Mediated Anterograde Transsynaptic Tagging: Mapping Corticocollicular Input-Defined Neural Pathways for Defense Behaviors.
Brian Zingg, Xiao-Lin Chou, Zheng-Gang Zhang, Lukas Mesik, Feixue Liang, Huizhong Whit Tao, Li I Zhang. Neuron 2017
202
8

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
988
8

Drosophila Brainbow: a recombinase-based fluorescence labeling technique to subdivide neural expression patterns.
Stefanie Hampel, Phuong Chung, Claire E McKellar, Donald Hall, Loren L Looger, Julie H Simpson. Nat Methods 2011
135
8

Monosynaptic restriction of transsynaptic tracing from single, genetically targeted neurons.
Ian R Wickersham, David C Lyon, Richard J O Barnard, Takuma Mori, Stefan Finke, Karl-Klaus Conzelmann, John A T Young, Edward M Callaway. Neuron 2007
673
8

Cellular barcoding tool for clonal analysis in the hematopoietic system.
Alice Gerrits, Brad Dykstra, Olga J Kalmykowa, Karin Klauke, Evgenia Verovskaya, Mathilde J C Broekhuis, Gerald de Haan, Leonid V Bystrykh. Blood 2010
144
8

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
7

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
169
7

Multiplexed and scalable super-resolution imaging of three-dimensional protein localization in size-adjustable tissues.
Taeyun Ku, Justin Swaney, Jeong-Yoon Park, Alexandre Albanese, Evan Murray, Jae Hun Cho, Young-Gyun Park, Vamsi Mangena, Jiapei Chen, Kwanghun Chung. Nat Biotechnol 2016
138
7

Targeting cells with single vectors using multiple-feature Boolean logic.
Lief E Fenno, Joanna Mattis, Charu Ramakrishnan, Minsuk Hyun, Soo Yeun Lee, Miao He, Jason Tucciarone, Aslihan Selimbeyoglu, Andre Berndt, Logan Grosenick,[...]. Nat Methods 2014
214
7

Cre-dependent selection yields AAV variants for widespread gene transfer to the adult brain.
Benjamin E Deverman, Piers L Pravdo, Bryan P Simpson, Sripriya Ravindra Kumar, Ken Y Chan, Abhik Banerjee, Wei-Li Wu, Bin Yang, Nina Huber, Sergiu P Pasca,[...]. Nat Biotechnol 2016
372
7

Saturated Reconstruction of a Volume of Neocortex.
Narayanan Kasthuri, Kenneth Jeffrey Hayworth, Daniel Raimund Berger, Richard Lee Schalek, José Angel Conchello, Seymour Knowles-Barley, Dongil Lee, Amelio Vázquez-Reina, Verena Kaynig, Thouis Raymond Jones,[...]. Cell 2015
384
7

Polylox barcoding reveals haematopoietic stem cell fates realized in vivo.
Weike Pei, Thorsten B Feyerabend, Jens Rössler, Xi Wang, Daniel Postrach, Katrin Busch, Immanuel Rode, Kay Klapproth, Nikolaus Dietlein, Claudia Quedenau,[...]. Nature 2017
163
7


Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
491
7

Viral-genetic tracing of the input-output organization of a central noradrenaline circuit.
Lindsay A Schwarz, Kazunari Miyamichi, Xiaojing J Gao, Kevin T Beier, Brandon Weissbourd, Katherine E DeLoach, Jing Ren, Sandy Ibanes, Robert C Malenka, Eric J Kremer,[...]. Nature 2015
304
6

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
609
6


Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
258
6

Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems.
Evan Murray, Jae Hun Cho, Daniel Goodwin, Taeyun Ku, Justin Swaney, Sung-Yon Kim, Heejin Choi, Young-Gyun Park, Jeong-Yoon Park, Austin Hubbert,[...]. Cell 2015
192
6

CLoNe is a new method to target single progenitors and study their progeny in mouse and chick.
Fernando García-Moreno, Navneet A Vasistha, Jo Begbie, Zoltán Molnár. Development 2014
43
13

A technicolour approach to the connectome.
Jeff W Lichtman, Jean Livet, Joshua R Sanes. Nat Rev Neurosci 2008
193
6

Expansion microscopy with conventional antibodies and fluorescent proteins.
Tyler J Chozinski, Aaron R Halpern, Haruhisa Okawa, Hyeon-Jin Kim, Grant J Tremel, Rachel O L Wong, Joshua C Vaughan. Nat Methods 2016
146
6

Iterative expansion microscopy.
Jae-Byum Chang, Fei Chen, Young-Gyu Yoon, Erica E Jung, Hazen Babcock, Jeong Seuk Kang, Shoh Asano, Ho-Jun Suk, Nikita Pak, Paul W Tillberg,[...]. Nat Methods 2017
126
6


Rabies Virus CVS-N2c(ΔG) Strain Enhances Retrograde Synaptic Transfer and Neuronal Viability.
Thomas R Reardon, Andrew J Murray, Gergely F Turi, Christoph Wirblich, Katherine R Croce, Matthias J Schnell, Thomas M Jessell, Attila Losonczy. Neuron 2016
103
6

Satb1 Regulates Contactin 5 to Pattern Dendrites of a Mammalian Retinal Ganglion Cell.
Yi-Rong Peng, Nicholas M Tran, Arjun Krishnaswamy, Dimitar Kostadinov, Emily M Martersteck, Joshua R Sanes. Neuron 2017
45
13

Mosaic analysis with double markers in mice.
Hui Zong, J Sebastian Espinosa, Helen Hong Su, Mandar D Muzumdar, Liqun Luo. Cell 2005
351
6

Globally optimal stitching of tiled 3D microscopic image acquisitions.
Stephan Preibisch, Stephan Saalfeld, Pavel Tomancak. Bioinformatics 2009
938
6

Rapidly evolving homing CRISPR barcodes.
Reza Kalhor, Prashant Mali, George M Church. Nat Methods 2017
91
6

Simultaneous lineage tracing and cell-type identification using CRISPR-Cas9-induced genetic scars.
Bastiaan Spanjaard, Bo Hu, Nina Mitic, Pedro Olivares-Chauvet, Sharan Janjuha, Nikolay Ninov, Jan Philipp Junker. Nat Biotechnol 2018
176
6

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain.
Bushra Raj, Daniel E Wagner, Aaron McKenna, Shristi Pandey, Allon M Klein, Jay Shendure, James A Gagnon, Alexander F Schier. Nat Biotechnol 2018
213
6

Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation.
Julie A Harris, Karla E Hirokawa, Staci A Sorensen, Hong Gu, Maya Mills, Lydia L Ng, Phillip Bohn, Marty Mortrud, Benjamin Ouellette, Jolene Kidney,[...]. Front Neural Circuits 2014
189
6

CAV-2--why a canine virus is a neurobiologist's best friend.
Felix Junyent, Eric J Kremer. Curr Opin Pharmacol 2015
70
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.