A citation-based method for searching scientific literature

Gijs den Besten, Karen van Eunen, Albert K Groen, Koen Venema, Dirk-Jan Reijngoud, Barbara M Bakker. J Lipid Res 2013
Times Cited: 1598







List of co-cited articles
809 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis.
Patrick M Smith, Michael R Howitt, Nicolai Panikov, Monia Michaud, Carey Ann Gallini, Mohammad Bohlooly-Y, Jonathan N Glickman, Wendy S Garrett. Science 2013
15

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells.
Yukihiro Furusawa, Yuuki Obata, Shinji Fukuda, Takaho A Endo, Gaku Nakato, Daisuke Takahashi, Yumiko Nakanishi, Chikako Uetake, Keiko Kato, Tamotsu Kato,[...]. Nature 2013
15

Short chain fatty acids in human large intestine, portal, hepatic and venous blood.
J H Cummings, E W Pomare, W J Branch, C P Naylor, G T Macfarlane. Gut 1987
14

Diet rapidly and reproducibly alters the human gut microbiome.
Lawrence A David, Corinne F Maurice, Rachel N Carmody, David B Gootenberg, Julie E Button, Benjamin E Wolfe, Alisha V Ling, A Sloan Devlin, Yug Varma, Michael A Fischbach,[...]. Nature 2014
13

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa.
Carlotta De Filippo, Duccio Cavalieri, Monica Di Paola, Matteo Ramazzotti, Jean Baptiste Poullet, Sebastien Massart, Silvia Collini, Giuseppe Pieraccini, Paolo Lionetti. Proc Natl Acad Sci U S A 2010
13

Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation.
Nicholas Arpaia, Clarissa Campbell, Xiying Fan, Stanislav Dikiy, Joris van der Veeken, Paul deRoos, Hui Liu, Justin R Cross, Klaus Pfeffer, Paul J Coffer,[...]. Nature 2013
13

Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43.
Kendle M Maslowski, Angelica T Vieira, Aylwin Ng, Jan Kranich, Frederic Sierro, Di Yu, Heidi C Schilter, Michael S Rolph, Fabienne Mackay, David Artis,[...]. Nature 2009
12

From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites.
Ara Koh, Filipe De Vadder, Petia Kovatcheva-Datchary, Fredrik Bäckhed. Cell 2016
11

Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis.
Aurélien Trompette, Eva S Gollwitzer, Koshika Yadava, Anke K Sichelstiel, Norbert Sprenger, Catherine Ngom-Bru, Carine Blanchard, Tobias Junt, Laurent P Nicod, Nicola L Harris,[...]. Nat Med 2014
10

The Orphan G protein-coupled receptors GPR41 and GPR43 are activated by propionate and other short chain carboxylic acids.
Andrew J Brown, Susan M Goldsworthy, Ashley A Barnes, Michelle M Eilert, Lili Tcheang, Dion Daniels, Alison I Muir, Mark J Wigglesworth, Ian Kinghorn, Neil J Fraser,[...]. J Biol Chem 2003
10

Short Chain Fatty Acids (SCFAs)-Mediated Gut Epithelial and Immune Regulation and Its Relevance for Inflammatory Bowel Diseases.
Daniela Parada Venegas, Marjorie K De la Fuente, Glauben Landskron, María Julieta González, Rodrigo Quera, Gerard Dijkstra, Hermie J M Harmsen, Klaas Nico Faber, Marcela A Hermoso. Front Immunol 2019
485
9

Gut microbiota functions: metabolism of nutrients and other food components.
Ian Rowland, Glenn Gibson, Almut Heinken, Karen Scott, Jonathan Swann, Ines Thiele, Kieran Tuohy. Eur J Nutr 2018
576
9

Effects of targeted delivery of propionate to the human colon on appetite regulation, body weight maintenance and adiposity in overweight adults.
Edward S Chambers, Alexander Viardot, Arianna Psichas, Douglas J Morrison, Kevin G Murphy, Sagen E K Zac-Varghese, Kenneth MacDougall, Tom Preston, Catriona Tedford, Graham S Finlayson,[...]. Gut 2015
474
9

Intestinal Short Chain Fatty Acids and their Link with Diet and Human Health.
David Ríos-Covián, Patricia Ruas-Madiedo, Abelardo Margolles, Miguel Gueimonde, Clara G de Los Reyes-Gavilán, Nuria Salazar. Front Microbiol 2016
709
9

The microbial metabolite butyrate regulates intestinal macrophage function via histone deacetylase inhibition.
Pamela V Chang, Liming Hao, Stefan Offermanns, Ruslan Medzhitov. Proc Natl Acad Sci U S A 2014
765
9

Formation of propionate and butyrate by the human colonic microbiota.
Petra Louis, Harry J Flint. Environ Microbiol 2017
548
9

Microbiota-generated metabolites promote metabolic benefits via gut-brain neural circuits.
Filipe De Vadder, Petia Kovatcheva-Datchary, Daisy Goncalves, Jennifer Vinera, Carine Zitoun, Adeline Duchampt, Fredrik Bäckhed, Gilles Mithieux. Cell 2014
895
8

Induction of intestinal Th17 cells by segmented filamentous bacteria.
Ivaylo I Ivanov, Koji Atarashi, Nicolas Manel, Eoin L Brodie, Tatsuichiro Shima, Ulas Karaoz, Dongguang Wei, Katherine C Goldfarb, Clark A Santee, Susan V Lynch,[...]. Cell 2009
8

Linking long-term dietary patterns with gut microbial enterotypes.
Gary D Wu, Jun Chen, Christian Hoffmann, Kyle Bittinger, Ying-Yu Chen, Sue A Keilbaugh, Meenakshi Bewtra, Dan Knights, William A Walters, Rob Knight,[...]. Science 2011
8

Microbiota and SCFA in lean and overweight healthy subjects.
Andreas Schwiertz, David Taras, Klaus Schäfer, Silvia Beijer, Nicolaas A Bos, Christiane Donus, Philip D Hardt. Obesity (Silver Spring) 2010
8

Gut microbiota, metabolites and host immunity.
Michelle G Rooks, Wendy S Garrett. Nat Rev Immunol 2016
987
8

A human gut microbial gene catalogue established by metagenomic sequencing.
Junjie Qin, Ruiqiang Li, Jeroen Raes, Manimozhiyan Arumugam, Kristoffer Solvsten Burgdorf, Chaysavanh Manichanh, Trine Nielsen, Nicolas Pons, Florence Levenez, Takuji Yamada,[...]. Nature 2010
8

Microbial ecology: human gut microbes associated with obesity.
Ruth E Ley, Peter J Turnbaugh, Samuel Klein, Jeffrey I Gordon. Nature 2006
8

Enterotypes of the human gut microbiome.
Manimozhiyan Arumugam, Jeroen Raes, Eric Pelletier, Denis Le Paslier, Takuji Yamada, Daniel R Mende, Gabriel R Fernandes, Julien Tap, Thomas Bruls, Jean-Michel Batto,[...]. Nature 2011
8

Regulation of inflammation by short chain fatty acids.
Marco A R Vinolo, Hosana G Rodrigues, Renato T Nachbar, Rui Curi. Nutrients 2011
583
8

Induction of colonic regulatory T cells by indigenous Clostridium species.
Koji Atarashi, Takeshi Tanoue, Tatsuichiro Shima, Akemi Imaoka, Tomomi Kuwahara, Yoshika Momose, Genhong Cheng, Sho Yamasaki, Takashi Saito, Yusuke Ohba,[...]. Science 2011
7

Diversity of the human intestinal microbial flora.
Paul B Eckburg, Elisabeth M Bik, Charles N Bernstein, Elizabeth Purdom, Les Dethlefsen, Michael Sargent, Steven R Gill, Karen E Nelson, David A Relman. Science 2005
7

Short chain fatty acids exchange across the gut and liver in humans measured at surgery.
Johanne G Bloemen, Koen Venema, Marcel C van de Poll, Steven W Olde Damink, Wim A Buurman, Cornelis H Dejong. Clin Nutr 2009
153
7

The gut microbiota, bacterial metabolites and colorectal cancer.
Petra Louis, Georgina L Hold, Harry J Flint. Nat Rev Microbiol 2014
7

An obesity-associated gut microbiome with increased capacity for energy harvest.
Peter J Turnbaugh, Ruth E Ley, Michael A Mahowald, Vincent Magrini, Elaine R Mardis, Jeffrey I Gordon. Nature 2006
7

A metagenome-wide association study of gut microbiota in type 2 diabetes.
Junjie Qin, Yingrui Li, Zhiming Cai, Shenghui Li, Jianfeng Zhu, Fan Zhang, Suisha Liang, Wenwei Zhang, Yuanlin Guan, Dongqian Shen,[...]. Nature 2012
7

The gut microbiota as an environmental factor that regulates fat storage.
Fredrik Bäckhed, Hao Ding, Ting Wang, Lora V Hooper, Gou Young Koh, Andras Nagy, Clay F Semenkovich, Jeffrey I Gordon. Proc Natl Acad Sci U S A 2004
7

Review article: the role of butyrate on colonic function.
H M Hamer, D Jonkers, K Venema, S Vanhoutvin, F J Troost, R-J Brummer. Aliment Pharmacol Ther 2008
7

Metagenomic biomarker discovery and explanation.
Nicola Segata, Jacques Izard, Levi Waldron, Dirk Gevers, Larisa Miropolsky, Wendy S Garrett, Curtis Huttenhower. Genome Biol 2011
7

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns.
Maria G Dominguez-Bello, Elizabeth K Costello, Monica Contreras, Magda Magris, Glida Hidalgo, Noah Fierer, Rob Knight. Proc Natl Acad Sci U S A 2010
6

Introduction to the human gut microbiota.
Elizabeth Thursby, Nathalie Juge. Biochem J 2017
628
6

Role of the microbiota in immunity and inflammation.
Yasmine Belkaid, Timothy W Hand. Cell 2014
6

Butyrate improves insulin sensitivity and increases energy expenditure in mice.
Zhanguo Gao, Jun Yin, Jin Zhang, Robert E Ward, Roy J Martin, Michael Lefevre, William T Cefalu, Jianping Ye. Diabetes 2009
937
6

Short-chain fatty acids stimulate glucagon-like peptide-1 secretion via the G-protein-coupled receptor FFAR2.
Gwen Tolhurst, Helen Heffron, Yu Shan Lam, Helen E Parker, Abdella M Habib, Eleftheria Diakogiannaki, Jennifer Cameron, Johannes Grosse, Frank Reimann, Fiona M Gribble. Diabetes 2012
977
6



Diversity, stability and resilience of the human gut microbiota.
Catherine A Lozupone, Jesse I Stombaugh, Jeffrey I Gordon, Janet K Jansson, Rob Knight. Nature 2012
6

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases.
Daniel N Frank, Allison L St Amand, Robert A Feldman, Edgar C Boedeker, Noam Harpaz, Norman R Pace. Proc Natl Acad Sci U S A 2007
6

Metabolite-sensing receptors GPR43 and GPR109A facilitate dietary fibre-induced gut homeostasis through regulation of the inflammasome.
Laurence Macia, Jian Tan, Angelica T Vieira, Katie Leach, Dragana Stanley, Suzanne Luong, Mikako Maruya, Craig Ian McKenzie, Atsushi Hijikata, Connie Wong,[...]. Nat Commun 2015
519
6

The microbiome and butyrate regulate energy metabolism and autophagy in the mammalian colon.
Dallas R Donohoe, Nikhil Garge, Xinxin Zhang, Wei Sun, Thomas M O'Connell, Maureen K Bunger, Scott J Bultman. Cell Metab 2011
782
6

Richness of human gut microbiome correlates with metabolic markers.
Emmanuelle Le Chatelier, Trine Nielsen, Junjie Qin, Edi Prifti, Falk Hildebrand, Gwen Falony, Mathieu Almeida, Manimozhiyan Arumugam, Jean-Michel Batto, Sean Kennedy,[...]. Nature 2013
6

Human gut microbiome viewed across age and geography.
Tanya Yatsunenko, Federico E Rey, Mark J Manary, Indi Trehan, Maria Gloria Dominguez-Bello, Monica Contreras, Magda Magris, Glida Hidalgo, Robert N Baldassano, Andrey P Anokhin,[...]. Nature 2012
6

Activation of Gpr109a, receptor for niacin and the commensal metabolite butyrate, suppresses colonic inflammation and carcinogenesis.
Nagendra Singh, Ashish Gurav, Sathish Sivaprakasam, Evan Brady, Ravi Padia, Huidong Shi, Muthusamy Thangaraju, Puttur D Prasad, Santhakumar Manicassamy, David H Munn,[...]. Immunity 2014
900
6

GPR109A is a G-protein-coupled receptor for the bacterial fermentation product butyrate and functions as a tumor suppressor in colon.
Muthusamy Thangaraju, Gail A Cresci, Kebin Liu, Sudha Ananth, Jaya P Gnanaprakasam, Darren D Browning, John D Mellinger, Sylvia B Smith, Gregory J Digby, Nevin A Lambert,[...]. Cancer Res 2009
333
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.