A citation-based method for searching scientific literature

Katsiaryna Bichel, Amanda J Price, Torsten Schaller, Greg J Towers, Stefan M V Freund, Leo C James. Retrovirology 2013
Times Cited: 69







List of co-cited articles
1106 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency.
Torsten Schaller, Karen E Ocwieja, Jane Rasaiyaah, Amanda J Price, Troy L Brady, Shoshannah L Roth, Stéphane Hué, Adam J Fletcher, KyeongEun Lee, Vineet N KewalRamani,[...]. PLoS Pathog 2011
320
78


Flexible use of nuclear import pathways by HIV-1.
KyeongEun Lee, Zandrea Ambrose, Thomas D Martin, Ilker Oztop, Alok Mulky, John G Julias, Nick Vandegraaff, Joerg G Baumann, Rui Wang, Wendy Yuen,[...]. Cell Host Microbe 2010
309
59

CPSF6 defines a conserved capsid interface that modulates HIV-1 replication.
Amanda J Price, Adam J Fletcher, Torsten Schaller, Tom Elliott, KyeongEun Lee, Vineet N KewalRamani, Jason W Chin, Greg J Towers, Leo C James. PLoS Pathog 2012
168
57

Human nucleoporins promote HIV-1 docking at the nuclear pore, nuclear import and integration.
Francesca Di Nunzio, Anne Danckaert, Thomas Fricke, Patricio Perez, Juliette Fernandez, Emmanuelle Perret, Pascal Roux, Spencer Shorte, Pierre Charneau, Felipe Diaz-Griffero,[...]. PLoS One 2012
110
50

HIV-1 evades innate immune recognition through specific cofactor recruitment.
Jane Rasaiyaah, Choon Ping Tan, Adam J Fletcher, Amanda J Price, Caroline Blondeau, Laura Hilditch, David A Jacques, David L Selwood, Leo C James, Mahdad Noursadeghi,[...]. Nature 2013
300
49


Identification of host proteins required for HIV infection through a functional genomic screen.
Abraham L Brass, Derek M Dykxhoorn, Yair Benita, Nan Yan, Alan Engelman, Ramnik J Xavier, Judy Lieberman, Stephen J Elledge. Science 2008
42

Host cofactors and pharmacologic ligands share an essential interface in HIV-1 capsid that is lost upon disassembly.
Amanda J Price, David A Jacques, William A McEwan, Adam J Fletcher, Sebastian Essig, Jason W Chin, Upul D Halambage, Christopher Aiken, Leo C James. PLoS Pathog 2014
160
42

Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication.
Renate König, Yingyao Zhou, Daniel Elleder, Tracy L Diamond, Ghislain M C Bonamy, Jeffrey T Irelan, Chih-Yuan Chiang, Buu P Tu, Paul D De Jesus, Caroline E Lilley,[...]. Cell 2008
723
39

The host proteins transportin SR2/TNPO3 and cyclophilin A exert opposing effects on HIV-1 uncoating.
Vaibhav B Shah, Jiong Shi, David R Hout, Ilker Oztop, Lavanya Krishnan, Jinwoo Ahn, Matthew S Shotwell, Alan Engelman, Christopher Aiken. J Virol 2013
100
37

Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid.
T R Gamble, F F Vajdos, S Yoo, D K Worthylake, M Houseweart, W I Sundquist, C P Hill. Cell 1996
580
37

X-ray structures of the hexameric building block of the HIV capsid.
Owen Pornillos, Barbie K Ganser-Pornillos, Brian N Kelly, Yuanzi Hua, Frank G Whitby, C David Stout, Wesley I Sundquist, Christopher P Hill, Mark Yeager. Cell 2009
363
37

Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B.
J Luban, K L Bossolt, E K Franke, G V Kalpana, S P Goff. Cell 1993
673
36

Nup153 and Nup98 bind the HIV-1 core and contribute to the early steps of HIV-1 replication.
Francesca Di Nunzio, Thomas Fricke, Annarita Miccio, Jose Carlos Valle-Casuso, Patricio Perez, Philippe Souque, Ermanno Rizzi, Marco Severgnini, Fulvio Mavilio, Pierre Charneau,[...]. Virology 2013
99
36

Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Gongpu Zhao, Juan R Perilla, Ernest L Yufenyuy, Xin Meng, Bo Chen, Jiying Ning, Jinwoo Ahn, Angela M Gronenborn, Klaus Schulten, Christopher Aiken,[...]. Nature 2013
460
36


Complementary assays reveal a relationship between HIV-1 uncoating and reverse transcription.
Amy E Hulme, Omar Perez, Thomas J Hope. Proc Natl Acad Sci U S A 2011
182
36

Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection.
Caroline Goujon, Olivier Moncorgé, Hélène Bauby, Tomas Doyle, Christopher C Ward, Torsten Schaller, Stéphane Hué, Wendy S Barclay, Reiner Schulz, Michael H Malim. Nature 2013
383
36

HIV-1 capsid: the multifaceted key player in HIV-1 infection.
Edward M Campbell, Thomas J Hope. Nat Rev Microbiol 2015
229
36

The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys.
Matthew Stremlau, Christopher M Owens, Michel J Perron, Michael Kiessling, Patrick Autissier, Joseph Sodroski. Nature 2004
34

TNPO3 protects HIV-1 replication from CPSF6-mediated capsid stabilization in the host cell cytoplasm.
Alberto De Iaco, Federico Santoni, Anne Vannier, Michel Guipponi, Stylianos Antonarakis, Jeremy Luban. Retrovirology 2013
107
34

Structural and functional analysis of the C-terminal domain of Nup358/RanBP2.
Daniel H Lin, Stephan Zimmermann, Tobias Stuwe, Evelyn Stuwe, André Hoelz. J Mol Biol 2013
39
58

Atomic-level modelling of the HIV capsid.
Owen Pornillos, Barbie K Ganser-Pornillos, Mark Yeager. Nature 2011
257
33

MX2 is an interferon-induced inhibitor of HIV-1 infection.
Melissa Kane, Shalini S Yadav, Julia Bitzegeio, Sebla B Kutluay, Trinity Zang, Sam J Wilson, John W Schoggins, Charles M Rice, Masahiro Yamashita, Theodora Hatziioannou,[...]. Nature 2013
332
33

Structural basis of HIV-1 capsid recognition by PF74 and CPSF6.
Akash Bhattacharya, Steven L Alam, Thomas Fricke, Kaneil Zadrozny, Jaroslaw Sedzicki, Alexander B Taylor, Borries Demeler, Owen Pornillos, Barbie K Ganser-Pornillos, Felipe Diaz-Griffero,[...]. Proc Natl Acad Sci U S A 2014
148
33

HIV integration targeting: a pathway involving Transportin-3 and the nuclear pore protein RanBP2.
Karen E Ocwieja, Troy L Brady, Keshet Ronen, Alyssa Huegel, Shoshannah L Roth, Torsten Schaller, Leo C James, Greg J Towers, John A T Young, Sumit K Chanda,[...]. PLoS Pathog 2011
164
31

Transportin-SR2 imports HIV into the nucleus.
Frauke Christ, Wannes Thys, Jan De Rijck, Rik Gijsbers, Alberto Albanese, Daniele Arosio, Stephane Emiliani, Jean-Christophe Rain, Richard Benarous, Anna Cereseto,[...]. Curr Biol 2008
193
31

HIV capsid is a tractable target for small molecule therapeutic intervention.
Wade S Blair, Chris Pickford, Stephen L Irving, David G Brown, Marie Anderson, Richard Bazin, Joan Cao, Giuseppe Ciaramella, Jason Isaacson, Lynn Jackson,[...]. PLoS Pathog 2010
192
30

Cyclophilin A retrotransposition into TRIM5 explains owl monkey resistance to HIV-1.
David M Sayah, Elena Sokolskaja, Lionel Berthoux, Jeremy Luban. Nature 2004
515
30

Evidence for direct involvement of the capsid protein in HIV infection of nondividing cells.
Masahiro Yamashita, Omar Perez, Thomas J Hope, Michael Emerman. PLoS Pathog 2007
157
30

The interferon-inducible MxB protein inhibits HIV-1 infection.
Zhenlong Liu, Qinghua Pan, Shilei Ding, Jin Qian, Fengwen Xu, Jinming Zhou, Shan Cen, Fei Guo, Chen Liang. Cell Host Microbe 2013
232
30

Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication.
Brett M Forshey, Uta von Schwedler, Wesley I Sundquist, Christopher Aiken. J Virol 2002
392
30

Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Jiong Shi, Jing Zhou, Vaibhav B Shah, Christopher Aiken, Kevin Whitby. J Virol 2011
172
28

Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor.
Matthew Stremlau, Michel Perron, Mark Lee, Yuan Li, Byeongwoon Song, Hassan Javanbakht, Felipe Diaz-Griffero, Donovan J Anderson, Wesley I Sundquist, Joseph Sodroski. Proc Natl Acad Sci U S A 2006
564
28

A cyclophilin homology domain-independent role for Nup358 in HIV-1 infection.
Anne M Meehan, Dyana T Saenz, Rebekah Guevera, James H Morrison, Mary Peretz, Hind J Fadel, Masakazu Hamada, Jan van Deursen, Eric M Poeschla. PLoS Pathog 2014
38
52

Quantitative microscopy of functional HIV post-entry complexes reveals association of replication with the viral capsid.
Ke Peng, Walter Muranyi, Bärbel Glass, Vibor Laketa, Stephen R Yant, Luong Tsai, Tomas Cihlar, Barbara Müller, Hans-Georg Kräusslich. Elife 2014
121
28

HIV-1 DNA Flap formation promotes uncoating of the pre-integration complex at the nuclear pore.
Nathalie J Arhel, Sylvie Souquere-Besse, Sandie Munier, Philippe Souque, Stéphanie Guadagnini, Sandra Rutherford, Marie-Christine Prévost, Terry D Allen, Pierre Charneau. EMBO J 2007
202
27

Assembly and analysis of conical models for the HIV-1 core.
B K Ganser, S Li, V Y Klishko, J T Finch, W I Sundquist. Science 1999
464
27


The requirement for cellular transportin 3 (TNPO3 or TRN-SR2) during infection maps to human immunodeficiency virus type 1 capsid and not integrase.
Lavanya Krishnan, Kenneth A Matreyek, Ilker Oztop, Kyeongeun Lee, Christopher H Tipper, Xiang Li, Mohd J Dar, Vineet N Kewalramani, Alan Engelman. J Virol 2010
144
26

Extreme genetic fragility of the HIV-1 capsid.
Suzannah J Rihn, Sam J Wilson, Nick J Loman, Mudathir Alim, Saskia E Bakker, David Bhella, Robert J Gifford, Frazer J Rixon, Paul D Bieniasz. PLoS Pathog 2013
125
26

The ability of TNPO3-depleted cells to inhibit HIV-1 infection requires CPSF6.
Thomas Fricke, Jose Carlos Valle-Casuso, Tommy E White, Alberto Brandariz-Nuñez, William J Bosche, Natalia Reszka, Robert Gorelick, Felipe Diaz-Griffero. Retrovirology 2013
69
26

The capsids of HIV-1 and HIV-2 determine immune detection of the viral cDNA by the innate sensor cGAS in dendritic cells.
Xavier Lahaye, Takeshi Satoh, Matteo Gentili, Silvia Cerboni, Cécile Conrad, Ilse Hurbain, Ahmed El Marjou, Christine Lacabaratz, Jean-Daniel Lelièvre, Nicolas Manel. Immunity 2013
252
26

Specific incorporation of cyclophilin A into HIV-1 virions.
E K Franke, H E Yuan, J Luban. Nature 1994
614
26

HIV-1 uncoating is facilitated by dynein and kinesin 1.
Zana Lukic, Adarsh Dharan, Thomas Fricke, Felipe Diaz-Griffero, Edward M Campbell. J Virol 2014
90
26

Direct Visualization of HIV-1 Replication Intermediates Shows that Capsid and CPSF6 Modulate HIV-1 Intra-nuclear Invasion and Integration.
Christopher R Chin, Jill M Perreira, George Savidis, Jocelyn M Portmann, Aaron M Aker, Eric M Feeley, Miles C Smith, Abraham L Brass. Cell Rep 2015
97
26



MxB binds to the HIV-1 core and prevents the uncoating process of HIV-1.
Thomas Fricke, Tommy E White, Bianca Schulte, Daniel A de Souza Aranha Vieira, Adarsh Dharan, Edward M Campbell, Alberto Brandariz-Nuñez, Felipe Diaz-Griffero. Retrovirology 2014
117
24


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.