A citation-based method for searching scientific literature

Stuart Campbell, Ismail Hassan Ismail, Leah C Young, Guy G Poirier, Michael J Hendzel. Cell Cycle 2013
Times Cited: 90







List of co-cited articles
1247 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the repressive polycomb and NuRD complexes to sites of DNA damage.
Danny M Chou, Britt Adamson, Noah E Dephoure, Xu Tan, Amanda C Nottke, Kristen E Hurov, Steven P Gygi, Monica P Colaiácovo, Stephen J Elledge. Proc Natl Acad Sci U S A 2010
376
60

ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks.
Niraj M Shanbhag, Ilona U Rafalska-Metcalf, Carlo Balane-Bolivar, Susan M Janicki, Roger A Greenberg. Cell 2010
471
27

BMI1 is recruited to DNA breaks and contributes to DNA damage-induced H2A ubiquitination and repair.
Vasudeva Ginjala, Karim Nacerddine, Atul Kulkarni, Jay Oza, Sarah J Hill, Ming Yao, Elisabetta Citterio, Maarten van Lohuizen, Shridar Ganesan. Mol Cell Biol 2011
180
25

Requirement for PBAF in transcriptional repression and repair at DNA breaks in actively transcribed regions of chromatin.
Andreas Kakarougkas, Amani Ismail, Anna L Chambers, Enriqueta Riballo, Alex D Herbert, Julia Künzel, Markus Löbrich, Penny A Jeggo, Jessica A Downs. Mol Cell 2014
167
25

BMI1-mediated histone ubiquitylation promotes DNA double-strand break repair.
Ismail Hassan Ismail, Christi Andrin, Darin McDonald, Michael J Hendzel. J Cell Biol 2010
199
23

Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination.
Jiangbo Tang, Nam Woo Cho, Gaofeng Cui, Erica M Manion, Niraj M Shanbhag, Maria Victoria Botuyan, Georges Mer, Roger A Greenberg. Nat Struct Mol Biol 2013
311
23


The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
21

DNA double-strand breaks promote methylation of histone H3 on lysine 9 and transient formation of repressive chromatin.
Marina K Ayrapetov, Ozge Gursoy-Yuzugullu, Chang Xu, Ye Xu, Brendan D Price. Proc Natl Acad Sci U S A 2014
203
21

RNF168 ubiquitinates K13-15 on H2A/H2AX to drive DNA damage signaling.
Francesca Mattiroli, Joseph H A Vissers, Willem J van Dijk, Pauline Ikpa, Elisabetta Citterio, Wim Vermeulen, Jurgen A Marteijn, Titia K Sixma. Cell 2012
391
20

Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks.
François Aymard, Beatrix Bugler, Christine K Schmidt, Emmanuelle Guillou, Pierre Caron, Sébastien Briois, Jason S Iacovoni, Virginie Daburon, Kyle M Miller, Stephen P Jackson,[...]. Nat Struct Mol Biol 2014
347
20

53BP1 is a reader of the DNA-damage-induced H2A Lys 15 ubiquitin mark.
Amélie Fradet-Turcotte, Marella D Canny, Cristina Escribano-Díaz, Alexandre Orthwein, Charles C Y Leung, Hao Huang, Marie-Claude Landry, Julianne Kitevski-LeBlanc, Sylvie M Noordermeer, Frank Sicheri,[...]. Nature 2013
407
18

SETD2-dependent histone H3K36 trimethylation is required for homologous recombination repair and genome stability.
Sophia X Pfister, Sara Ahrabi, Lykourgos-Panagiotis Zalmas, Sovan Sarkar, François Aymard, Csanád Z Bachrati, Thomas Helleday, Gaëlle Legube, Nicholas B La Thangue, Andrew C G Porter,[...]. Cell Rep 2014
250
18


Histone demethylase KDM5A regulates the ZMYND8-NuRD chromatin remodeler to promote DNA repair.
Fade Gong, Thomas Clouaire, Marion Aguirrebengoa, Gaëlle Legube, Kyle M Miller. J Cell Biol 2017
80
21

Human HDAC1 and HDAC2 function in the DNA-damage response to promote DNA nonhomologous end-joining.
Kyle M Miller, Jorrit V Tjeertes, Julia Coates, Gaëlle Legube, Sophie E Polo, Sébastien Britton, Stephen P Jackson. Nat Struct Mol Biol 2010
416
17

DNAPKcs-dependent arrest of RNA polymerase II transcription in the presence of DNA breaks.
Tibor Pankotai, Céline Bonhomme, David Chen, Evi Soutoglou. Nat Struct Mol Biol 2012
150
17

EZH2 inhibition as a therapeutic strategy for lymphoma with EZH2-activating mutations.
Michael T McCabe, Heidi M Ott, Gopinath Ganji, Susan Korenchuk, Christine Thompson, Glenn S Van Aller, Yan Liu, Alan P Graves, Anthony Della Pietra, Elsie Diaz,[...]. Nature 2012
17


Histone H3 methylation links DNA damage detection to activation of the tumour suppressor Tip60.
Yingli Sun, Xiaofeng Jiang, Ye Xu, Marina K Ayrapetov, Lisa A Moreau, Johnathan R Whetstine, Brendan D Price. Nat Cell Biol 2009
300
17

Polycomb protein EZH2 regulates cancer cell fate decision in response to DNA damage.
Z Wu, S T Lee, Y Qiao, Z Li, P L Lee, Y J Lee, X Jiang, J Tan, M Aau, C Z H Lim,[...]. Cell Death Differ 2011
68
22

Double-strand break repair: 53BP1 comes into focus.
Stephanie Panier, Simon J Boulton. Nat Rev Mol Cell Biol 2014
582
16

The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
16

Methylation of histone H3 lysine 36 enhances DNA repair by nonhomologous end-joining.
Sheema Fnu, Elizabeth A Williamson, Leyma P De Haro, Mark Brenneman, Justin Wray, Montaser Shaheen, Krishnan Radhakrishnan, Suk-Hee Lee, Jac A Nickoloff, Robert Hromas. Proc Natl Acad Sci U S A 2011
176
16

PARP1-dependent recruitment of KDM4D histone demethylase to DNA damage sites promotes double-strand break repair.
Hanan Khoury-Haddad, Noga Guttmann-Raviv, Inbal Ipenberg, David Huggins, Anand D Jeyasekharan, Nabieh Ayoub. Proc Natl Acad Sci U S A 2014
83
16

ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
Shuhei Matsuoka, Bryan A Ballif, Agata Smogorzewska, E Robert McDonald, Kristen E Hurov, Ji Luo, Corey E Bakalarski, Zhenming Zhao, Nicole Solimini, Yaniv Lerenthal,[...]. Science 2007
14

The histone demethylase LSD1/KDM1A promotes the DNA damage response.
Nima Mosammaparast, Haeyoung Kim, Benoit Laurent, Yu Zhao, Hui Jun Lim, Mona C Majid, Sebastian Dango, Yuying Luo, Kristina Hempel, Mathew E Sowa,[...]. J Cell Biol 2013
73
17

Histone demethylase KDM5B is a key regulator of genome stability.
Xin Li, Ling Liu, Shangda Yang, Nan Song, Xing Zhou, Jie Gao, Na Yu, Lin Shan, Qian Wang, Jing Liang,[...]. Proc Natl Acad Sci U S A 2014
78
16

A macrohistone variant links dynamic chromatin compaction to BRCA1-dependent genome maintenance.
Simran Khurana, Michael J Kruhlak, Jeongkyu Kim, Andy D Tran, Jinping Liu, Katherine Nyswaner, Lei Shi, Parthav Jailwala, Myong-Hee Sung, Ofir Hakim,[...]. Cell Rep 2014
129
14

Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.
Fade Gong, Li-Ya Chiu, Ben Cox, François Aymard, Thomas Clouaire, Justin W Leung, Michael Cammarata, Mercedes Perez, Poonam Agarwal, Jennifer S Brodbelt,[...]. Genes Dev 2015
136
14

Regulation of DNA-damage responses and cell-cycle progression by the chromatin remodelling factor CHD4.
Sophie E Polo, Abderrahmane Kaidi, Linda Baskcomb, Yaron Galanty, Stephen P Jackson. EMBO J 2010
236
13

Oxidative damage targets complexes containing DNA methyltransferases, SIRT1, and polycomb members to promoter CpG Islands.
Heather M O'Hagan, Wei Wang, Subhojit Sen, Christina Destefano Shields, Stella S Lee, Yang W Zhang, Eriko G Clements, Yi Cai, Leander Van Neste, Hariharan Easwaran,[...]. Cancer Cell 2011
328
13


The Polycomb complex PRC2 and its mark in life.
Raphaël Margueron, Danny Reinberg. Nature 2011
13

Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair.
Maria Victoria Botuyan, Joseph Lee, Irene M Ward, Ja-Eun Kim, James R Thompson, Junjie Chen, Georges Mer. Cell 2006
687
13

Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks.
Yentram Huyen, Omar Zgheib, Richard A Ditullio, Vassilis G Gorgoulis, Panayotis Zacharatos, Tom J Petty, Emily A Sheston, Hestia S Mellert, Elena S Stavridi, Thanos D Halazonetis. Nature 2004
652
13

RNF8- and RNF168-dependent degradation of KDM4A/JMJD2A triggers 53BP1 recruitment to DNA damage sites.
Frédérick A Mallette, Francesca Mattiroli, Gaofeng Cui, Leah C Young, Michael J Hendzel, Georges Mer, Titia K Sixma, Stéphane Richard. EMBO J 2012
232
13

MMSET regulates histone H4K20 methylation and 53BP1 accumulation at DNA damage sites.
Huadong Pei, Lindsey Zhang, Kuntian Luo, Yuxin Qin, Marta Chesi, Frances Fei, P Leif Bergsagel, Liewei Wang, Zhongsheng You, Zhenkun Lou. Nature 2011
295
13

SETD2 is required for DNA double-strand break repair and activation of the p53-mediated checkpoint.
Sílvia Carvalho, Alexandra C Vítor, Sreerama C Sridhara, Filipa B Martins, Ana C Raposo, Joana M P Desterro, João Ferreira, Sérgio F de Almeida. Elife 2014
140
13

LEDGF (p75) promotes DNA-end resection and homologous recombination.
Mads Daugaard, Annika Baude, Kasper Fugger, Lou Klitgaard Povlsen, Halfdan Beck, Claus Storgaard Sørensen, Nikolaj H T Petersen, Poul H B Sorensen, Claudia Lukas, Jiri Bartek,[...]. Nat Struct Mol Biol 2012
118
13

The AAA-ATPase VCP/p97 promotes 53BP1 recruitment by removing L3MBTL1 from DNA double-strand breaks.
Klara Acs, Martijn S Luijsterburg, Leena Ackermann, Florian A Salomons, Thorsten Hoppe, Nico P Dantuma. Nat Struct Mol Biol 2011
196
13

Prime, repair, restore: the active role of chromatin in the DNA damage response.
Gaston Soria, Sophie E Polo, Geneviève Almouzni. Mol Cell 2012
238
12

The emerging role of Polycomb repressors in the response to DNA damage.
Joseph H A Vissers, Maarten van Lohuizen, Elisabetta Citterio. J Cell Sci 2012
58
18

Chromatin remodeling at DNA double-strand breaks.
Brendan D Price, Alan D D'Andrea. Cell 2013
347
12



Requirement of ATM-dependent monoubiquitylation of histone H2B for timely repair of DNA double-strand breaks.
Lilach Moyal, Yaniv Lerenthal, Mali Gana-Weisz, Gilad Mass, Sairei So, Shih-Ya Wang, Berina Eppink, Young Min Chung, Gil Shalev, Efrat Shema,[...]. Mol Cell 2011
257
12

Orchestration of the DNA-damage response by the RNF8 ubiquitin ligase.
Nadine K Kolas, J Ross Chapman, Shinichiro Nakada, Jarkko Ylanko, Richard Chahwan, Frédéric D Sweeney, Stephanie Panier, Megan Mendez, Jan Wildenhain, Timothy M Thomson,[...]. Science 2007
667
12

Acetylation-dependent nuclear arrangement and recruitment of BMI1 protein to UV-damaged chromatin.
Gabriela Sustáčková, Stanislav Kozubek, Lenka Stixová, Soňa Legartová, Pavel Matula, Darya Orlova, Eva Bártová. J Cell Physiol 2012
42
23

Regulation of homologous recombination by RNF20-dependent H2B ubiquitination.
Kyosuke Nakamura, Akihiro Kato, Junya Kobayashi, Hiromi Yanagihara, Shuichi Sakamoto, Douglas V N P Oliveira, Mikio Shimada, Hiroshi Tauchi, Hidekazu Suzuki, Satoshi Tashiro,[...]. Mol Cell 2011
231
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.