A citation-based method for searching scientific literature

Carrie L Partch, Carla B Green, Joseph S Takahashi. Trends Cell Biol 2014
Times Cited: 720







List of co-cited articles
1027 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
30


Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
847
19

Central and peripheral circadian clocks in mammals.
Jennifer A Mohawk, Carla B Green, Joseph S Takahashi. Annu Rev Neurosci 2012
18


Role of the CLOCK protein in the mammalian circadian mechanism.
N Gekakis, D Staknis, H B Nguyen, F C Davis, L D Wilsbacher, D P King, J S Takahashi, C J Weitz. Science 1998
13

PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues.
Seung-Hee Yoo, Shin Yamazaki, Phillip L Lowrey, Kazuhiro Shimomura, Caroline H Ko, Ethan D Buhr, Sandra M Siepka, Hee-Kyung Hong, Won Jun Oh, Ook Joon Yoo,[...]. Proc Natl Acad Sci U S A 2004
13

Generation of circadian rhythms in the suprachiasmatic nucleus.
Michael H Hastings, Elizabeth S Maywood, Marco Brancaccio. Nat Rev Neurosci 2018
257
12


The Circadian Clock and Human Health.
Till Roenneberg, Martha Merrow. Curr Biol 2016
359
11

Molecular mechanisms and physiological importance of circadian rhythms.
Alina Patke, Michael W Young, Sofia Axelrod. Nat Rev Mol Cell Biol 2020
182
11

Obesity and metabolic syndrome in circadian Clock mutant mice.
Fred W Turek, Corinne Joshu, Akira Kohsaka, Emily Lin, Ganka Ivanova, Erin McDearmon, Aaron Laposky, Sue Losee-Olson, Amy Easton, Dalan R Jensen,[...]. Science 2005
10

A functional genomics strategy reveals Rora as a component of the mammalian circadian clock.
Trey K Sato, Satchidananda Panda, Loren J Miraglia, Teresa M Reyes, Radu D Rudic, Peter McNamara, Kinnery A Naik, Garret A FitzGerald, Steve A Kay, John B Hogenesch. Neuron 2004
705
10


The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
10

AMPK regulates the circadian clock by cryptochrome phosphorylation and degradation.
Katja A Lamia, Uma M Sachdeva, Luciano DiTacchio, Elliot C Williams, Jacqueline G Alvarez, Daniel F Egan, Debbie S Vasquez, Henry Juguilon, Satchidananda Panda, Reuben J Shaw,[...]. Science 2009
574
10

Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet.
Megumi Hatori, Christopher Vollmers, Amir Zarrinpar, Luciano DiTacchio, Eric A Bushong, Shubhroz Gill, Mathias Leblanc, Amandine Chaix, Matthew Joens, James A J Fitzpatrick,[...]. Cell Metab 2012
984
10

Harmonics of circadian gene transcription in mammals.
Michael E Hughes, Luciano DiTacchio, Kevin R Hayes, Christopher Vollmers, S Pulivarthy, Julie E Baggs, Satchidananda Panda, John B Hogenesch. PLoS Genet 2009
441
9

Diurnal transcriptome atlas of a primate across major neural and peripheral tissues.
Ludovic S Mure, Hiep D Le, Giorgia Benegiamo, Max W Chang, Luis Rios, Ngalla Jillani, Maina Ngotho, Thomas Kariuki, Ouria Dkhissi-Benyahya, Howard M Cooper,[...]. Science 2018
288
9

Molecular components of the Mammalian circadian clock.
Ethan D Buhr, Joseph S Takahashi. Handb Exp Pharmacol 2013
391
9

Early aging and age-related pathologies in mice deficient in BMAL1, the core componentof the circadian clock.
Roman V Kondratov, Anna A Kondratova, Victoria Y Gorbacheva, Olena V Vykhovanets, Marina P Antoch. Genes Dev 2006
709
9

Post-translational modifications regulate the ticking of the circadian clock.
Monica Gallego, David M Virshup. Nat Rev Mol Cell Biol 2007
547
9

Coordination of circadian timing in mammals.
Steven M Reppert, David R Weaver. Nature 2002
9

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
941
9

Molecular components of the mammalian circadian clock.
Caroline H Ko, Joseph S Takahashi. Hum Mol Genet 2006
9

High-fat diet disrupts behavioral and molecular circadian rhythms in mice.
Akira Kohsaka, Aaron D Laposky, Kathryn Moynihan Ramsey, Carmela Estrada, Corinne Joshu, Yumiko Kobayashi, Fred W Turek, Joseph Bass. Cell Metab 2007
922
9

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass,[...]. Nature 2012
640
9

A web of circadian pacemakers.
Ueli Schibler, Paolo Sassone-Corsi. Cell 2002
527
9

Coordinated transcription of key pathways in the mouse by the circadian clock.
Satchidananda Panda, Marina P Antoch, Brooke H Miller, Andrew I Su, Andrew B Schook, Marty Straume, Peter G Schultz, Steve A Kay, Joseph S Takahashi, John B Hogenesch. Cell 2002
8

Muscle insulin sensitivity and glucose metabolism are controlled by the intrinsic muscle clock.
Kenneth A Dyar, Stefano Ciciliot, Lauren E Wright, Rasmus S Biensø, Guidantonio M Tagliazucchi, Vishal R Patel, Mattia Forcato, Marcia I P Paz, Anders Gudiksen, Francesca Solagna,[...]. Mol Metab 2013
223
8

Atlas of Circadian Metabolism Reveals System-wide Coordination and Communication between Clocks.
Kenneth A Dyar, Dominik Lutter, Anna Artati, Nicholas J Ceglia, Yu Liu, Danny Armenta, Martin Jastroch, Sandra Schneider, Sara de Mateo, Marlene Cervantes,[...]. Cell 2018
141
8


mCRY1 and mCRY2 are essential components of the negative limb of the circadian clock feedback loop.
K Kume, M J Zylka, S Sriram, L P Shearman, D R Weaver, X Jin, E S Maywood, M H Hastings, S M Reppert. Cell 1999
8



Circadian rhythm disruption and mental health.
William H Walker, James C Walton, A Courtney DeVries, Randy J Nelson. Transl Psychiatry 2020
138
8

Circadian clock genes and the transcriptional architecture of the clock mechanism.
Kimberly H Cox, Joseph S Takahashi. J Mol Endocrinol 2019
85
9

Reprogramming of the circadian clock by nutritional challenge.
Kristin L Eckel-Mahan, Vishal R Patel, Sara de Mateo, Ricardo Orozco-Solis, Nicholas J Ceglia, Saurabh Sahar, Sherry A Dilag-Penilla, Kenneth A Dyar, Pierre Baldi, Paolo Sassone-Corsi. Cell 2013
379
8

Circadian time signatures of fitness and disease.
Joseph Bass, Mitchell A Lazar. Science 2016
277
7

Resetting central and peripheral circadian oscillators in transgenic rats.
S Yamazaki, R Numano, M Abe, A Hida, R Takahashi, M Ueda, G D Block, Y Sakaki, M Menaker, H Tei. Science 2000
7

SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
907
7

Extensive and divergent circadian gene expression in liver and heart.
Kai-Florian Storch, Ovidiu Lipan, Igor Leykin, N Viswanathan, Fred C Davis, Wing H Wong, Charles J Weitz. Nature 2002
7

Circadian Rhythm Disruption Promotes Lung Tumorigenesis.
Thales Papagiannakopoulos, Matthew R Bauer, Shawn M Davidson, Megan Heimann, Lakshmipriya Subbaraj, Arjun Bhutkar, Jordan Bartlebaugh, Matthew G Vander Heiden, Tyler Jacks. Cell Metab 2016
208
7

Transplanted suprachiasmatic nucleus determines circadian period.
M R Ralph, R G Foster, F C Davis, M Menaker. Science 1990
7

Crosstalk between metabolism and circadian clocks.
Hans Reinke, Gad Asher. Nat Rev Mol Cell Biol 2019
183
7

Regulating the Suprachiasmatic Nucleus (SCN) Circadian Clockwork: Interplay between Cell-Autonomous and Circuit-Level Mechanisms.
Erik D Herzog, Tracey Hermanstyne, Nicola J Smyllie, Michael H Hastings. Cold Spring Harb Perspect Biol 2017
103
7

Circadian physiology of metabolism.
Satchidananda Panda. Science 2016
392
6

Circadian Clock Interaction with HIF1α Mediates Oxygenic Metabolism and Anaerobic Glycolysis in Skeletal Muscle.
Clara Bien Peek, Daniel C Levine, Jonathan Cedernaes, Akihiko Taguchi, Yumiko Kobayashi, Stacy J Tsai, Nicolle A Bonar, Maureen R McNulty, Kathryn Moynihan Ramsey, Joseph Bass. Cell Metab 2017
167
6

Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.
Jennifer M Hurley, Arko Dasgupta, Jillian M Emerson, Xiaoying Zhou, Carol S Ringelberg, Nicole Knabe, Anna M Lipzen, Erika A Lindquist, Christopher G Daum, Kerrie W Barry,[...]. Proc Natl Acad Sci U S A 2014
77
7

CLOCK and NPAS2 have overlapping roles in the suprachiasmatic circadian clock.
Jason P DeBruyne, David R Weaver, Steven M Reppert. Nat Neurosci 2007
314
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.