A citation-based method for searching scientific literature

Louis R Lapierre, C Daniel De Magalhaes Filho, Philip R McQuary, Chu-Chiao Chu, Orane Visvikis, Jessica T Chang, Sara Gelino, Binnan Ong, Andrew E Davis, Javier E Irazoqui, Andrew Dillin, Malene Hansen. Nat Commun 2013
Times Cited: 265







List of co-cited articles
1654 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
38

A gene network regulating lysosomal biogenesis and function.
Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk,[...]. Science 2009
29


A lysosome-to-nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB.
Carmine Settembre, Roberto Zoncu, Diego L Medina, Francesco Vetrini, Serkan Erdin, SerpilUckac Erdin, Tuong Huynh, Mathieu Ferron, Gerard Karsenty, Michel C Vellard,[...]. EMBO J 2012
25

DAF-16/FOXO and HLH-30/TFEB function as combinatorial transcription factors to promote stress resistance and longevity.
Xin-Xuan Lin, Ilke Sen, Georges E Janssens, Xin Zhou, Bryan R Fonslow, Daniel Edgar, Nicholas Stroustrup, Peter Swoboda, John R Yates, Gary Ruvkun,[...]. Nat Commun 2018
62
38

Lysosomal calcium signalling regulates autophagy through calcineurin and ​TFEB.
Diego L Medina, Simone Di Paola, Ivana Peluso, Andrea Armani, Diego De Stefani, Rossella Venditti, Sandro Montefusco, Anna Scotto-Rosato, Carolina Prezioso, Alison Forrester,[...]. Nat Cell Biol 2015
682
23

MTORC1 functions as a transcriptional regulator of autophagy by preventing nuclear transport of TFEB.
Jose A Martina, Yong Chen, Marjan Gucek, Rosa Puertollano. Autophagy 2012
681
22

The transcription factor TFEB links mTORC1 signaling to transcriptional control of lysosome homeostasis.
Agnes Roczniak-Ferguson, Constance S Petit, Florian Froehlich, Sharon Qian, Jennifer Ky, Brittany Angarola, Tobias C Walther, Shawn M Ferguson. Sci Signal 2012
741
21

TFEB controls cellular lipid metabolism through a starvation-induced autoregulatory loop.
Carmine Settembre, Rossella De Cegli, Gelsomina Mansueto, Pradip K Saha, Francesco Vetrini, Orane Visvikis, Tuong Huynh, Annamaria Carissimo, Donna Palmer, Tiemo Jürgen Klisch,[...]. Nat Cell Biol 2013
569
21

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
20


Innate host defense requires TFEB-mediated transcription of cytoprotective and antimicrobial genes.
Orane Visvikis, Nnamdi Ihuegbu, Sid A Labed, Lyly G Luhachack, Anna-Maria F Alves, Amanda C Wollenberg, Lynda M Stuart, Gary D Stormo, Javier E Irazoqui. Immunity 2014
168
18

A role for autophagy in the extension of lifespan by dietary restriction in C. elegans.
Malene Hansen, Abha Chandra, Laura L Mitic, Brian Onken, Monica Driscoll, Cynthia Kenyon. PLoS Genet 2008
491
18

The genetics of ageing.
Cynthia J Kenyon. Nature 2010
16

Autophagy genes are essential for dauer development and life-span extension in C. elegans.
Alicia Meléndez, Zsolt Tallóczy, Matthew Seaman, Eeva-Liisa Eskelinen, David H Hall, Beth Levine. Science 2003
943
16

Coordination of mitophagy and mitochondrial biogenesis during ageing in C. elegans.
Konstantinos Palikaras, Eirini Lionaki, Nektarios Tavernarakis. Nature 2015
384
15

Promoting basal levels of autophagy in the nervous system enhances longevity and oxidant resistance in adult Drosophila.
Anne Simonsen, Robert C Cumming, Andreas Brech, Pauline Isakson, David R Schubert, Kim D Finley. Autophagy 2008
457
14

Autophagy and lipid metabolism coordinately modulate life span in germline-less C. elegans.
Louis R Lapierre, Sara Gelino, Alicia Meléndez, Malene Hansen. Curr Biol 2011
218
14

The nutrient-responsive transcription factor TFE3 promotes autophagy, lysosomal biogenesis, and clearance of cellular debris.
José A Martina, Heba I Diab, Li Lishu, Lim Jeong-A, Simona Patange, Nina Raben, Rosa Puertollano. Sci Signal 2014
348
14

Overexpression of Atg5 in mice activates autophagy and extends lifespan.
Jong-Ok Pyo, Seung-Min Yoo, Hye-Hyun Ahn, Jihoon Nah, Se-Hoon Hong, Tae-In Kam, Sunmin Jung, Yong-Keun Jung. Nat Commun 2013
391
14

Mondo complexes regulate TFEB via TOR inhibition to promote longevity in response to gonadal signals.
Shuhei Nakamura, Özlem Karalay, Philipp S Jäger, Makoto Horikawa, Corinna Klein, Kayo Nakamura, Christian Latza, Sven E Templer, Christoph Dieterich, Adam Antebi. Nat Commun 2016
46
28

Longevity pathways converge on autophagy genes to regulate life span in Caenorhabditis elegans.
Márton L Tóth, Tímea Sigmond, Eva Borsos, János Barna, Péter Erdélyi, Krisztina Takács-Vellai, László Orosz, Attila L Kovács, György Csikós, Miklós Sass,[...]. Autophagy 2008
287
13

mTOR-dependent phosphorylation controls TFEB nuclear export.
Gennaro Napolitano, Alessandra Esposito, Heejun Choi, Maria Matarese, Valerio Benedetti, Chiara Di Malta, Jlenia Monfregola, Diego Luis Medina, Jennifer Lippincott-Schwartz, Andrea Ballabio. Nat Commun 2018
131
12

mTORC1-independent TFEB activation via Akt inhibition promotes cellular clearance in neurodegenerative storage diseases.
Michela Palmieri, Rituraj Pal, Hemanth R Nelvagal, Parisa Lotfi, Gary R Stinnett, Michelle L Seymour, Arindam Chaudhury, Lakshya Bajaj, Vitaliy V Bondar, Laura Bremner,[...]. Nat Commun 2017
235
12


Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways.
Michela Palmieri, Soren Impey, Hyojin Kang, Alberto di Ronza, Carl Pelz, Marco Sardiello, Andrea Ballabio. Hum Mol Genet 2011
523
12

Nuclear Export Inhibition Enhances HLH-30/TFEB Activity, Autophagy, and Lifespan.
Melissa J Silvestrini, Joseph R Johnson, Anita V Kumar, Tara G Thakurta, Karine Blais, Zachary A Neill, Sarah W Marion, Victoria St Amand, Robert A Reenan, Louis R Lapierre. Cell Rep 2018
41
26

Transcriptional control of autophagy-lysosome function drives pancreatic cancer metabolism.
Rushika M Perera, Svetlana Stoykova, Brandon N Nicolay, Kenneth N Ross, Julien Fitamant, Myriam Boukhali, Justine Lengrand, Vikram Deshpande, Martin K Selig, Cristina R Ferrone,[...]. Nature 2015
461
11

Autophagy as a promoter of longevity: insights from model organisms.
Malene Hansen, David C Rubinsztein, David W Walker. Nat Rev Mol Cell Biol 2018
273
11

TFEB-mediated autophagy rescues midbrain dopamine neurons from α-synuclein toxicity.
Mickael Decressac, Bengt Mattsson, Pia Weikop, Martin Lundblad, Johan Jakobsson, Anders Björklund. Proc Natl Acad Sci U S A 2013
444
11

Spatiotemporal regulation of autophagy during Caenorhabditis elegans aging.
Jessica T Chang, Caroline Kumsta, Andrew B Hellman, Linnea M Adams, Malene Hansen. Elife 2017
102
11

A C. elegans mutant that lives twice as long as wild type.
C Kenyon, J Chang, E Gensch, A Rudner, R Tabtiang. Nature 1993
11

Small-molecule TFEB pathway agonists that ameliorate metabolic syndrome in mice and extend C. elegans lifespan.
Chensu Wang, Hanspeter Niederstrasser, Peter M Douglas, Rueyling Lin, Juan Jaramillo, Yang Li, Nathaniel W Oswald, Anwu Zhou, Elizabeth A McMillan, Saurabh Mendiratta,[...]. Nat Commun 2017
81
13

TFEB and TFE3 cooperate in the regulation of the innate immune response in activated macrophages.
Nunzia Pastore, Owen A Brady, Heba I Diab, José A Martina, Lu Sun, Tuong Huynh, Jeong-A Lim, Hossein Zare, Nina Raben, Andrea Ballabio,[...]. Autophagy 2016
149
10

Genome-wide RNAi screening in Caenorhabditis elegans.
Ravi S Kamath, Julie Ahringer. Methods 2003
908
10

Transcriptional activation of lysosomal exocytosis promotes cellular clearance.
Diego L Medina, Alessandro Fraldi, Valentina Bouche, Fabio Annunziata, Gelsomina Mansueto, Carmine Spampanato, Claudia Puri, Antonella Pignata, Jose A Martina, Marco Sardiello,[...]. Dev Cell 2011
423
10

TFEB at a glance.
Gennaro Napolitano, Andrea Ballabio. J Cell Sci 2016
367
10

A RANKL-PKCβ-TFEB signaling cascade is necessary for lysosomal biogenesis in osteoclasts.
Mathieu Ferron, Carmine Settembre, Junko Shimazu, Julie Lacombe, Shigeaki Kato, David J Rawlings, Andrea Ballabio, Gerard Karsenty. Genes Dev 2013
111
10

Transcription Factor EB Controls Metabolic Flexibility during Exercise.
Gelsomina Mansueto, Andrea Armani, Carlo Viscomi, Luca D'Orsi, Rossella De Cegli, Elena V Polishchuk, Costanza Lamperti, Ivano Di Meo, Vanina Romanello, Silvia Marchet,[...]. Cell Metab 2017
163
10

Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans.
Coleen T Murphy, Steven A McCarroll, Cornelia I Bargmann, Andrew Fraser, Ravi S Kamath, Julie Ahringer, Hao Li, Cynthia Kenyon. Nature 2003
10

Autophagy and aging.
David C Rubinsztein, Guillermo Mariño, Guido Kroemer. Cell 2011
10

Hormetic heat stress and HSF-1 induce autophagy to improve survival and proteostasis in C. elegans.
Caroline Kumsta, Jessica T Chang, Jessica Schmalz, Malene Hansen. Nat Commun 2017
106
10

Disruption of the beclin 1-BCL2 autophagy regulatory complex promotes longevity in mice.
Álvaro F Fernández, Salwa Sebti, Yongjie Wei, Zhongju Zou, Mingjun Shi, Kathryn L McMillan, Congcong He, Tabitha Ting, Yang Liu, Wei-Chung Chiang,[...]. Nature 2018
271
10

Autophagy regulates lipid metabolism.
Rajat Singh, Susmita Kaushik, Yongjun Wang, Youqing Xiang, Inna Novak, Masaaki Komatsu, Keiji Tanaka, Ana Maria Cuervo, Mark J Czaja. Nature 2009
9

Importance of TFEB acetylation in control of its transcriptional activity and lysosomal function in response to histone deacetylase inhibitors.
Jianbin Zhang, Jigang Wang, Zhihong Zhou, Jung-Eun Park, Liming Wang, Shuai Wu, Xin Sun, Liqin Lu, Tianru Wang, Qingsong Lin,[...]. Autophagy 2018
48
18

The coming of age of chaperone-mediated autophagy.
Susmita Kaushik, Ana Maria Cuervo. Nat Rev Mol Cell Biol 2018
447
9

Aging. Lysosomal signaling molecules regulate longevity in Caenorhabditis elegans.
Andrew Folick, Holly D Oakley, Yong Yu, Eric H Armstrong, Manju Kumari, Lucas Sanor, David D Moore, Eric A Ortlund, Rudolf Zechner, Meng C Wang. Science 2015
143
9

Metformin extends C. elegans lifespan through lysosomal pathway.
Jie Chen, Yuhui Ou, Yi Li, Shumei Hu, Li-Wa Shao, Ying Liu. Elife 2017
85
10

The Transcription Factors TFEB and TFE3 Link the FLCN-AMPK Signaling Axis to Innate Immune Response and Pathogen Resistance.
Leeanna El-Houjeiri, Elite Possik, Tarika Vijayaraghavan, Mathieu Paquette, José A Martina, Jalal M Kazan, Eric H Ma, Russell Jones, Paola Blanchette, Rosa Puertollano,[...]. Cell Rep 2019
50
18

Urolithin A induces mitophagy and prolongs lifespan in C. elegans and increases muscle function in rodents.
Dongryeol Ryu, Laurent Mouchiroud, Pénélope A Andreux, Elena Katsyuba, Norman Moullan, Amandine A Nicolet-Dit-Félix, Evan G Williams, Pooja Jha, Giuseppe Lo Sasso, Damien Huzard,[...]. Nat Med 2016
405
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.