A citation-based method for searching scientific literature

John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
Times Cited: 406







List of co-cited articles
948 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
49

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
862
49

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
39

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri.
Feng Zhang, Matthias Prigge, Florent Beyrière, Satoshi P Tsunoda, Joanna Mattis, Ofer Yizhar, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2008
317
29

Near-infrared deep brain stimulation via upconversion nanoparticle-mediated optogenetics.
Shuo Chen, Adam Z Weitemier, Xiao Zeng, Linmeng He, Xiyu Wang, Yanqiu Tao, Arthur J Y Huang, Yuki Hashimotodani, Masanobu Kano, Hirohide Iwasaki,[...]. Science 2018
319
27

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
262
25

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
21

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
704
20

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
592
19


Characterization of engineered channelrhodopsin variants with improved properties and kinetics.
John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
402
17

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
17

Optogenetics.
Karl Deisseroth. Nat Methods 2011
858
17

Ectopic expression of a microbial-type rhodopsin restores visual responses in mice with photoreceptor degeneration.
Anding Bi, Jinjuan Cui, Yu-Ping Ma, Elena Olshevskaya, Mingliang Pu, Alexander M Dizhoor, Zhuo-Hua Pan. Neuron 2006
412
16

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
936
15

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.
Georg Nagel, Martin Brauner, Jana F Liewald, Nona Adeishvili, Ernst Bamberg, Alexander Gottschalk. Curr Biol 2005
575
14

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
419
14

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
959
14

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
13

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
267
13

Optogenetic defibrillation terminates ventricular arrhythmia in mouse hearts and human simulations.
Tobias Bruegmann, Patrick M Boyle, Christoph C Vogt, Thomas V Karathanos, Hermenegild J Arevalo, Bernd K Fleischmann, Natalia A Trayanova, Philipp Sasse. J Clin Invest 2016
73
17

Optogenetic control of heart muscle in vitro and in vivo.
Tobias Bruegmann, Daniela Malan, Michael Hesse, Thomas Beiert, Christopher J Fuegemann, Bernd K Fleischmann, Philipp Sasse. Nat Methods 2010
251
13

Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.
Sonja Kleinlogel, Katrin Feldbauer, Robert E Dempski, Heike Fotis, Phillip G Wood, Christian Bamann, Ernst Bamberg. Nat Neurosci 2011
243
13

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
422
12

Injectable, cellular-scale optoelectronics with applications for wireless optogenetics.
Tae-il Kim, Jordan G McCall, Yei Hwan Jung, Xian Huang, Edward R Siuda, Yuhang Li, Jizhou Song, Young Min Song, Hsuan An Pao, Rak-Hwan Kim,[...]. Science 2013
468
12

Crystal structure of the channelrhodopsin light-gated cation channel.
Hideaki E Kato, Feng Zhang, Ofer Yizhar, Charu Ramakrishnan, Tomohiro Nishizawa, Kunio Hirata, Jumpei Ito, Yusuke Aita, Tomoya Tsukazaki, Shigehiko Hayashi,[...]. Nature 2012
301
12

The microbial opsin family of optogenetic tools.
Feng Zhang, Johannes Vierock, Ofer Yizhar, Lief E Fenno, Satoshi Tsunoda, Arash Kianianmomeni, Matthias Prigge, Andre Berndt, John Cushman, Jürgen Polle,[...]. Cell 2011
298
12

Projections from neocortex mediate top-down control of memory retrieval.
Priyamvada Rajasethupathy, Sethuraman Sankaran, James H Marshel, Christina K Kim, Emily Ferenczi, Soo Yeun Lee, Andre Berndt, Charu Ramakrishnan, Anna Jaffe, Maisie Lo,[...]. Nature 2015
188
11

Red-shifted channelrhodopsin stimulation restores light responses in blind mice, macaque retina, and human retina.
Abhishek Sengupta, Antoine Chaffiol, Emilie Macé, Romain Caplette, Mélissa Desrosiers, Maruša Lampič, Valérie Forster, Olivier Marre, John Y Lin, José-Alain Sahel,[...]. EMBO Mol Med 2016
78
14

Cortical layer-specific critical dynamics triggering perception.
James H Marshel, Yoon Seok Kim, Timothy A Machado, Sean Quirin, Brandon Benson, Jonathan Kadmon, Cephra Raja, Adelaida Chibukhchyan, Charu Ramakrishnan, Masatoshi Inoue,[...]. Science 2019
103
11

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
215
10

Soft, stretchable, fully implantable miniaturized optoelectronic systems for wireless optogenetics.
Sung Il Park, Daniel S Brenner, Gunchul Shin, Clinton D Morgan, Bryan A Copits, Ha Uk Chung, Melanie Y Pullen, Kyung Nim Noh, Steve Davidson, Soong Ju Oh,[...]. Nat Biotechnol 2015
269
10

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications.
Viviana Gradinaru, Kimberly R Thompson, Karl Deisseroth. Brain Cell Biol 2008
286
10

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
375
10

Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
332
10

Optogenetic control of cardiac function.
Aristides B Arrenberg, Didier Y R Stainier, Herwig Baier, Jan Huisken. Science 2010
275
10

High frequency neural spiking and auditory signaling by ultrafast red-shifted optogenetics.
Thomas Mager, David Lopez de la Morena, Verena Senn, Johannes Schlotte, Anna D Errico, Katrin Feldbauer, Christian Wrobel, Sangyong Jung, Kai Bodensiek, Vladan Rankovic,[...]. Nat Commun 2018
44
22


A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.
Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella,[...]. Nat Neurosci 2012
700
9


Dye-Sensitized Core/Active Shell Upconversion Nanoparticles for Optogenetics and Bioimaging Applications.
Xiang Wu, Yuanwei Zhang, Kendra Takle, Osman Bilsel, Zhanjun Li, Hyungseok Lee, Zijiao Zhang, Dongsheng Li, Wei Fan, Chunying Duan,[...]. ACS Nano 2016
173
9

Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation.
Rohit Prakash, Ofer Yizhar, Benjamin Grewe, Charu Ramakrishnan, Nancy Wang, Inbal Goshen, Adam M Packer, Darcy S Peterka, Rafael Yuste, Mark J Schnitzer,[...]. Nat Methods 2012
175
9

Optogenetic control of Drosophila using a red-shifted channelrhodopsin reveals experience-dependent influences on courtship.
Hidehiko K Inagaki, Yonil Jung, Eric D Hoopfer, Allan M Wong, Neeli Mishra, John Y Lin, Roger Y Tsien, David J Anderson. Nat Methods 2014
147
9

Crystal structure of the red light-activated channelrhodopsin Chrimson.
Kazumasa Oda, Johannes Vierock, Satomi Oishi, Silvia Rodriguez-Rozada, Reiya Taniguchi, Keitaro Yamashita, J Simon Wiegert, Tomohiro Nishizawa, Peter Hegemann, Osamu Nureki. Nat Commun 2018
37
24

Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopsin and green algae channelrhodopsin.
Xiang Li, Davina V Gutierrez, M Gartz Hanson, Jing Han, Melanie D Mark, Hillel Chiel, Peter Hegemann, Lynn T Landmesser, Stefan Herlitze. Proc Natl Acad Sci U S A 2005
332
9

Cardiac Optogenetics: 2018.
Patrick M Boyle, Thomas V Karathanos, Natalia A Trayanova. JACC Clin Electrophysiol 2018
26
34

Wireless magnetothermal deep brain stimulation.
Ritchie Chen, Gabriela Romero, Michael G Christiansen, Alan Mohr, Polina Anikeeva. Science 2015
220
9

Optogenetic termination of ventricular arrhythmias in the whole heart: towards biological cardiac rhythm management.
Emile C A Nyns, Annemarie Kip, Cindy I Bart, Jaap J Plomp, Katja Zeppenfeld, Martin J Schalij, Antoine A F de Vries, Daniël A Pijnappels. Eur Heart J 2017
51
17

Systemic gene transfer enables optogenetic pacing of mouse hearts.
Christoph C Vogt, Tobias Bruegmann, Daniela Malan, Annika Ottersbach, Wilhelm Roell, Bernd K Fleischmann, Philipp Sasse. Cardiovasc Res 2015
66
13

Stimulating cardiac muscle by light: cardiac optogenetics by cell delivery.
Zhiheng Jia, Virginijus Valiunas, Zongju Lu, Harold Bien, Huilin Liu, Hong-Zhang Wang, Barbara Rosati, Peter R Brink, Ira S Cohen, Emilia Entcheva. Circ Arrhythm Electrophysiol 2011
120
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.