A citation-based method for searching scientific literature

Natalie Saini, Sreejith Ramakrishnan, Rajula Elango, Sandeep Ayyar, Yu Zhang, Angela Deem, Grzegorz Ira, James E Haber, Kirill S Lobachev, Anna Malkova. Nature 2013
Times Cited: 220







List of co-cited articles
1493 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration.
Marenda A Wilson, YoungHo Kwon, Yuanyuan Xu, Woo-Hyun Chung, Peter Chi, Hengyao Niu, Ryan Mayle, Xuefeng Chen, Anna Malkova, Patrick Sung,[...]. Nature 2013
204
63

Break-induced replication and telomerase-independent telomere maintenance require Pol32.
John R Lydeard, Suvi Jain, Miyuki Yamaguchi, James E Haber. Nature 2007
347
47

Break-induced replication occurs by conservative DNA synthesis.
Roberto A Donnianni, Lorraine S Symington. Proc Natl Acad Sci U S A 2013
120
43

Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
284
37

Break-induced replication is highly inaccurate.
Angela Deem, Andrea Keszthelyi, Tiffany Blackgrove, Alexandra Vayl, Barbara Coffey, Ruchi Mathur, Andrei Chabes, Anna Malkova. PLoS Biol 2011
191
37

DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Ryan Mayle, Ian M Campbell, Christine R Beck, Yang Yu, Marenda Wilson, Chad A Shaw, Lotte Bjergbaek, James R Lupski, Grzegorz Ira. Science 2015
128
36

Template switching during break-induced replication.
Catherine E Smith, Bertrand Llorente, Lorraine S Symington. Nature 2007
246
33

Break induced replication in eukaryotes: mechanisms, functions, and consequences.
Cynthia J Sakofsky, Anna Malkova. Crit Rev Biochem Mol Biol 2017
83
36

Break-induced DNA replication.
Ranjith P Anand, Susan T Lovett, James E Haber. Cold Spring Harb Perspect Biol 2013
151
26

RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.
Rahul Bhowmick, Sheroy Minocherhomji, Ian D Hickson. Mol Cell 2016
191
26

Break-induced replication is a source of mutation clusters underlying kataegis.
Cynthia J Sakofsky, Steven A Roberts, Ewa Malc, Piotr A Mieczkowski, Michael A Resnick, Dmitry A Gordenin, Anna Malkova. Cell Rep 2014
107
26

Mammalian RAD52 Functions in Break-Induced Replication Repair of Collapsed DNA Replication Forks.
Sotirios K Sotiriou, Irene Kamileri, Natalia Lugli, Konstantinos Evangelou, Caterina Da-Ré, Florian Huber, Laura Padayachy, Sebastien Tardy, Noemie L Nicati, Samia Barriot,[...]. Mol Cell 2016
161
24

Replication stress activates DNA repair synthesis in mitosis.
Sheroy Minocherhomji, Songmin Ying, Victoria A Bjerregaard, Sara Bursomanno, Aiste Aleliunaite, Wei Wu, Hocine W Mankouri, Huahao Shen, Ying Liu, Ian D Hickson. Nature 2015
301
24

Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae.
Angela Deem, Krista Barker, Kelly Vanhulle, Brandon Downing, Alexandra Vayl, Anna Malkova. Genetics 2008
76
28

Break-induced replication: what is it and what is it for?
Bertrand Llorente, Catherine E Smith, Lorraine S Symington. Cell Cycle 2008
217
21


Break-Induced Replication: The Where, The Why, and The How.
J Kramara, B Osia, A Malkova. Trends Genet 2018
101
21

RAD51-dependent break-induced replication differs in kinetics and checkpoint responses from RAD51-mediated gene conversion.
Anna Malkova, Maria L Naylor, Miyuki Yamaguchi, Grzegorz Ira, James E Haber. Mol Cell Biol 2005
128
20

Break-induced telomere synthesis underlies alternative telomere maintenance.
Robert L Dilley, Priyanka Verma, Nam Woo Cho, Harrison D Winters, Anne R Wondisford, Roger A Greenberg. Nature 2016
218
20

Alternative lengthening of human telomeres is a conservative DNA replication process with features of break-induced replication.
Fani-Marlen Roumelioti, Sotirios K Sotiriou, Vasiliki Katsini, Maria Chiourea, Thanos D Halazonetis, Sarantis Gagos. EMBO Rep 2016
91
19

Break-induced replication requires all essential DNA replication factors except those specific for pre-RC assembly.
John R Lydeard, Zachary Lipkin-Moore, Yi-Jun Sheu, Bruce Stillman, Peter M Burgers, James E Haber. Genes Dev 2010
125
17


The role of break-induced replication in large-scale expansions of (CAG)n/(CTG)n repeats.
Jane C Kim, Samantha T Harris, Teresa Dinter, Kartik A Shah, Sergei M Mirkin. Nat Struct Mol Biol 2017
53
30

RAD51-dependent break-induced replication in yeast.
Allison P Davis, Lorraine S Symington. Mol Cell Biol 2004
141
16

Translesion Polymerases Drive Microhomology-Mediated Break-Induced Replication Leading to Complex Chromosomal Rearrangements.
Cynthia J Sakofsky, Sandeep Ayyar, Angela K Deem, Woo-Hyun Chung, Grzegorz Ira, Anna Malkova. Mol Cell 2015
71
22

Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing.
Eleni P Mimitou, Lorraine S Symington. Nature 2008
726
15

Break-induced replication: functions and molecular mechanism.
Anna Malkova, Grzegorz Ira. Curr Opin Genet Dev 2013
117
15

Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.
Zhu Zhu, Woo-Hyun Chung, Eun Yong Shim, Sang Eun Lee, Grzegorz Ira. Cell 2008
752
15



Role of the Pif1-PCNA Complex in Pol δ-Dependent Strand Displacement DNA Synthesis and Break-Induced Replication.
Olga Buzovetsky, Youngho Kwon, Nhung Tuyet Pham, Claire Kim, Grzegorz Ira, Patrick Sung, Yong Xiong. Cell Rep 2017
36
41


Chromosome rearrangements via template switching between diverged repeated sequences.
Ranjith P Anand, Olga Tsaponina, Patricia W Greenwell, Cheng-Sheng Lee, Wei Du, Thomas D Petes, James E Haber. Genes Dev 2014
71
19

Polymerase δ replicates both strands after homologous recombination-dependent fork restart.
Izumi Miyabe, Ken'Ichi Mizuno, Andrea Keszthelyi, Yasukazu Daigaku, Meliti Skouteri, Saed Mohebi, Thomas A Kunkel, Johanne M Murray, Antony M Carr. Nat Struct Mol Biol 2015
61
22

Causes and consequences of replication stress.
Michelle K Zeman, Karlene A Cimprich. Nat Cell Biol 2014
14

A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair.
Suvi Jain, Neal Sugawara, John Lydeard, Moreshwar Vaze, Nicolas Tanguy Le Gac, James E Haber. Genes Dev 2009
99
13



Interchromosomal homology searches drive directional ALT telomere movement and synapsis.
Nam Woo Cho, Robert L Dilley, Michael A Lampson, Roger A Greenberg. Cell 2014
205
12

Mechanism and regulation of DNA end resection in eukaryotes.
Lorraine S Symington. Crit Rev Biochem Mol Biol 2016
220
12

Evidence suggesting that Pif1 helicase functions in DNA replication with the Dna2 helicase/nuclease and DNA polymerase delta.
Martin E Budd, Clara C Reis, Stephanie Smith, Kyungjae Myung, Judith L Campbell. Mol Cell Biol 2006
157
12

Defective resection at DNA double-strand breaks leads to de novo telomere formation and enhances gene targeting.
Woo-Hyun Chung, Zhu Zhu, Alma Papusha, Anna Malkova, Grzegorz Ira. PLoS Genet 2010
131
11

Mechanisms and regulation of mitotic recombination in Saccharomyces cerevisiae.
Lorraine S Symington, Rodney Rothstein, Michael Lisby. Genetics 2014
217
11

Yeast Mph1 helicase dissociates Rad51-made D-loops: implications for crossover control in mitotic recombination.
Rohit Prakash, Dominik Satory, Eloïse Dray, Almas Papusha, Jürgen Scheller, Wilfried Kramer, Lumir Krejci, Hannah Klein, James E Haber, Patrick Sung,[...]. Genes Dev 2009
190
11

Pif1p helicase, a catalytic inhibitor of telomerase in yeast.
J Zhou, E K Monson, S C Teng, V P Schulz, V A Zakian. Science 2000
186
11

Pif1 family helicases suppress genome instability at G-quadruplex motifs.
Katrin Paeschke, Matthew L Bochman, P Daniela Garcia, Petr Cejka, Katherine L Friedman, Stephen C Kowalczykowski, Virginia A Zakian. Nature 2013
299
11


Cascades of genetic instability resulting from compromised break-induced replication.
Soumini Vasan, Angela Deem, Sreejith Ramakrishnan, Juan Lucas Argueso, Anna Malkova. PLoS Genet 2014
27
40


Mechanisms underlying structural variant formation in genomic disorders.
Claudia M B Carvalho, James R Lupski. Nat Rev Genet 2016
292
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.