A citation-based method for searching scientific literature

Aravind Penmatsa, Kevin H Wang, Eric Gouaux. Nature 2013
Times Cited: 387







List of co-cited articles
1410 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


X-ray structures and mechanism of the human serotonin transporter.
Jonathan A Coleman, Evan M Green, Eric Gouaux. Nature 2016
305
68

Crystal structure of a bacterial homologue of Na+/Cl--dependent neurotransmitter transporters.
Atsuko Yamashita, Satinder K Singh, Toshimitsu Kawate, Yan Jin, Eric Gouaux. Nature 2005
54

Neurotransmitter and psychostimulant recognition by the dopamine transporter.
Kevin H Wang, Aravind Penmatsa, Eric Gouaux. Nature 2015
229
46

SLC6 neurotransmitter transporters: structure, function, and regulation.
Anders S Kristensen, Jacob Andersen, Trine N Jørgensen, Lena Sørensen, Jacob Eriksen, Claus J Loland, Kristian Strømgaard, Ulrik Gether. Pharmacol Rev 2011
488
39



X-ray structures of Drosophila dopamine transporter in complex with nisoxetine and reboxetine.
Aravind Penmatsa, Kevin H Wang, Eric Gouaux. Nat Struct Mol Biol 2015
97
22


A competitive inhibitor traps LeuT in an open-to-out conformation.
Satinder K Singh, Chayne L Piscitelli, Atsuko Yamashita, Eric Gouaux. Science 2008
323
20

Serotonin transporter-ibogaine complexes illuminate mechanisms of inhibition and transport.
Jonathan A Coleman, Dongxue Yang, Zhiyu Zhao, Po-Chao Wen, Craig Yoshioka, Emad Tajkhorshid, Eric Gouaux. Nature 2019
64
31

Antidepressant binding site in a bacterial homologue of neurotransmitter transporters.
Satinder K Singh, Atsuko Yamashita, Eric Gouaux. Nature 2007
319
16

Mechanism for alternating access in neurotransmitter transporters.
Lucy R Forrest, Yuan-Wei Zhang, Miriam T Jacobs, Joan Gesmonde, Li Xie, Barry H Honig, Gary Rudnick. Proc Natl Acad Sci U S A 2008
267
15

Cholesterol binding to a conserved site modulates the conformation, pharmacology, and transport kinetics of the human serotonin transporter.
Louise Laursen, Kasper Severinsen, Kristina Birch Kristensen, Xavier Periole, Malene Overby, Heidi Kaastrup Müller, Birgit Schiøtt, Steffen Sinning. J Biol Chem 2018
28
50



A mechanism for intracellular release of Na+ by neurotransmitter/sodium symporters.
Lina Malinauskaite, Matthias Quick, Linda Reinhard, Joseph A Lyons, Hideaki Yano, Jonathan A Javitch, Poul Nissen. Nat Struct Mol Biol 2014
106
13

A direct interaction of cholesterol with the dopamine transporter prevents its out-to-inward transition.
Talia Zeppelin, Lucy Kate Ladefoged, Steffen Sinning, Xavier Periole, Birgit Schiøtt. PLoS Comput Biol 2018
46
28

Shared Molecular Mechanisms of Membrane Transporters.
David Drew, Olga Boudker. Annu Rev Biochem 2016
196
13

Steric hindrance mutagenesis in the conserved extracellular vestibule impedes allosteric binding of antidepressants to the serotonin transporter.
Per Plenge, Lei Shi, Thijs Beuming, Jerez Te, Amy Hauck Newman, Harel Weinstein, Ulrik Gether, Claus J Loland. J Biol Chem 2012
63
19

Structural basis for action by diverse antidepressants on biogenic amine transporters.
Hui Wang, April Goehring, Kevin H Wang, Aravind Penmatsa, Ryan Ressler, Eric Gouaux. Nature 2013
97
12

Monoamine transporters: structure, intrinsic dynamics and allosteric regulation.
Mary Hongying Cheng, Ivet Bahar. Nat Struct Mol Biol 2019
30
40


Antidepressant specificity of serotonin transporter suggested by three LeuT-SSRI structures.
Zheng Zhou, Juan Zhen, Nathan K Karpowich, Christopher J Law, Maarten E A Reith, Da-Neng Wang. Nat Struct Mol Biol 2009
177
11

Binding of an octylglucoside detergent molecule in the second substrate (S2) site of LeuT establishes an inhibitor-bound conformation.
Matthias Quick, Anne-Marie Lund Winther, Lei Shi, Poul Nissen, Harel Weinstein, Jonathan A Javitch. Proc Natl Acad Sci U S A 2009
141
11

Computational modeling of the N-terminus of the human dopamine transporter and its interaction with PIP2 -containing membranes.
George Khelashvili, Milka Doktorova, Michelle A Sahai, Niklaus Johner, Lei Shi, Harel Weinstein. Proteins 2015
36
30


The solute carrier 6 family of transporters.
Stefan Bröer, Ulrik Gether. Br J Pharmacol 2012
129
11

The SLC6 transporters: perspectives on structure, functions, regulation, and models for transporter dysfunction.
Gary Rudnick, Reinhard Krämer, Randy D Blakely, Dennis L Murphy, Francois Verrey. Pflugers Arch 2014
85
12

Scalable molecular dynamics with NAMD.
James C Phillips, Rosemary Braun, Wei Wang, James Gumbart, Emad Tajkhorshid, Elizabeth Villa, Christophe Chipot, Robert D Skeel, Laxmikant Kalé, Klaus Schulten. J Comput Chem 2005
10


Spontaneous inward opening of the dopamine transporter is triggered by PIP2-regulated dynamics of the N-terminus.
George Khelashvili, Nathaniel Stanley, Michelle A Sahai, Jaime Medina, Michael V LeVine, Lei Shi, Gianni De Fabritiis, Harel Weinstein. ACS Chem Neurosci 2015
70
14

The binding sites for cocaine and dopamine in the dopamine transporter overlap.
Thijs Beuming, Julie Kniazeff, Marianne L Bergmann, Lei Shi, Luis Gracia, Klaudia Raniszewska, Amy Hauck Newman, Jonathan A Javitch, Harel Weinstein, Ulrik Gether,[...]. Nat Neurosci 2008
239
10

SLC6 transporters: structure, function, regulation, disease association and therapeutics.
Akula Bala Pramod, James Foster, Lucia Carvelli, L Keith Henry. Mol Aspects Med 2013
154
10

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
10

Identification of a chloride ion binding site in Na+/Cl -dependent transporters.
Lucy R Forrest, Sotiria Tavoulari, Yuan-Wei Zhang, Gary Rudnick, Barry Honig. Proc Natl Acad Sci U S A 2007
165
10

Structure of the human LAT1-4F2hc heteromeric amino acid transporter complex.
Renhong Yan, Xin Zhao, Jianlin Lei, Qiang Zhou. Nature 2019
99
10

Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc.
Yongchan Lee, Pattama Wiriyasermkul, Chunhuan Jin, Lili Quan, Ryuichi Ohgaki, Suguru Okuda, Tsukasa Kusakizako, Tomohiro Nishizawa, Kazumasa Oda, Ryuichiro Ishitani,[...]. Nat Struct Mol Biol 2019
56
17

Chloride binding site of neurotransmitter sodium symporters.
Adriana K Kantcheva, Matthias Quick, Lei Shi, Anne-Marie Lund Winther, Sebastian Stolzenberg, Harel Weinstein, Jonathan A Javitch, Poul Nissen. Proc Natl Acad Sci U S A 2013
60
15

Insights into the Modulation of Dopamine Transporter Function by Amphetamine, Orphenadrine, and Cocaine Binding.
Mary Hongying Cheng, Ethan Block, Feizhuo Hu, Murat Can Cobanoglu, Alexander Sorkin, Ivet Bahar. Front Neurol 2015
36
25

Membrane proteins bind lipids selectively to modulate their structure and function.
Arthur Laganowsky, Eamonn Reading, Timothy M Allison, Martin B Ulmschneider, Matteo T Degiacomi, Andrew J Baldwin, Carol V Robinson. Nature 2014
419
9

Substrate-modulated gating dynamics in a Na+-coupled neurotransmitter transporter homologue.
Yongfang Zhao, Daniel S Terry, Lei Shi, Matthias Quick, Harel Weinstein, Scott C Blanchard, Jonathan A Javitch. Nature 2011
224
9

Direct PIP2 binding mediates stable oligomer formation of the serotonin transporter.
Andreas Anderluh, Tina Hofmaier, Enrico Klotzsch, Oliver Kudlacek, Thomas Stockner, Harald H Sitte, Gerhard J Schütz. Nat Commun 2017
36
25


Comparative modeling of the human monoamine transporters: similarities in substrate binding.
Heidi Koldsø, Anja B Christiansen, Steffen Sinning, Birgit Schiøtt. ACS Chem Neurosci 2013
43
20

Structure and allosteric inhibition of excitatory amino acid transporter 1.
Juan C Canul-Tec, Reda Assal, Erica Cirri, Pierre Legrand, Sébastien Brier, Julia Chamot-Rooke, Nicolas Reyes. Nature 2017
112
9

A conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state.
Lina Malinauskaite, Saida Said, Caglanur Sahin, Julie Grouleff, Azadeh Shahsavar, Henriette Bjerregaard, Pernille Noer, Kasper Severinsen, Thomas Boesen, Birgit Schiøtt,[...]. Nat Commun 2016
34
26

Interaction of antidepressants with the serotonin and norepinephrine transporters: mutational studies of the S1 substrate binding pocket.
Lena Sørensen, Jacob Andersen, Mette Thomsen, Stinna M R Hansen, Xiaobei Zhao, Albin Sandelin, Kristian Strømgaard, Anders S Kristensen. J Biol Chem 2012
56
16

VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
9

Structural basis for amino acid transport by the CAT family of SLC7 transporters.
Katharina E J Jungnickel, Joanne L Parker, Simon Newstead. Nat Commun 2018
49
18

Mechanism of chloride interaction with neurotransmitter:sodium symporters.
Elia Zomot, Annie Bendahan, Matthias Quick, Yongfang Zhao, Jonathan A Javitch, Baruch I Kanner. Nature 2007
170
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.