A citation-based method for searching scientific literature

Clara Bien Peek, Alison H Affinati, Kathryn Moynihan Ramsey, Hsin-Yu Kuo, Wei Yu, Laura A Sena, Olga Ilkayeva, Biliana Marcheva, Yumiko Kobayashi, Chiaki Omura, Daniel C Levine, David J Bacsik, David Gius, Christopher B Newgard, Eric Goetzman, Navdeep S Chandel, John M Denu, Milan Mrksich, Joseph Bass. Science 2013
Times Cited: 410







List of co-cited articles
1208 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis.
Kathryn Moynihan Ramsey, Jun Yoshino, Cynthia S Brace, Dana Abrassart, Yumiko Kobayashi, Biliana Marcheva, Hee-Kyung Hong, Jason L Chong, Ethan D Buhr, Choogon Lee,[...]. Science 2009
774
28

Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1.
Yasukazu Nakahata, Saurabh Sahar, Giuseppe Astarita, Milota Kaluzova, Paolo Sassone-Corsi. Science 2009
831
27

A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
27

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
969
22

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
898
22

Hepatic Bmal1 Regulates Rhythmic Mitochondrial Dynamics and Promotes Metabolic Fitness.
David Jacobi, Sihao Liu, Kristopher Burkewitz, Nora Kory, Nelson H Knudsen, Ryan K Alexander, Ugur Unluturk, Xiaobo Li, Xiaohui Kong, Alexander L Hyde,[...]. Cell Metab 2015
195
21

SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
932
20


Circadian Control of DRP1 Activity Regulates Mitochondrial Dynamics and Bioenergetics.
Karen Schmitt, Amandine Grimm, Robert Dallmann, Bjoern Oettinghaus, Lisa Michelle Restelli, Melissa Witzig, Naotada Ishihara, Katsuyoshi Mihara, Jürgen A Ripperger, Urs Albrecht,[...]. Cell Metab 2018
126
19

Circadian Clock Interaction with HIF1α Mediates Oxygenic Metabolism and Anaerobic Glycolysis in Skeletal Muscle.
Clara Bien Peek, Daniel C Levine, Jonathan Cedernaes, Akihiko Taguchi, Yumiko Kobayashi, Stacy J Tsai, Nicolle A Bonar, Maureen R McNulty, Kathryn Moynihan Ramsey, Joseph Bass. Cell Metab 2017
187
17

Circadian control of oscillations in mitochondrial rate-limiting enzymes and nutrient utilization by PERIOD proteins.
Adi Neufeld-Cohen, Maria S Robles, Rona Aviram, Gal Manella, Yaarit Adamovich, Benjamin Ladeuix, Dana Nir, Liat Rousso-Noori, Yael Kuperman, Marina Golik,[...]. Proc Natl Acad Sci U S A 2016
132
16

Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes.
Biliana Marcheva, Kathryn Moynihan Ramsey, Ethan D Buhr, Yumiko Kobayashi, Hong Su, Caroline H Ko, Ganka Ivanova, Chiaki Omura, Shelley Mo, Martha H Vitaterna,[...]. Nature 2010
978
15

Crosstalk between metabolism and circadian clocks.
Hans Reinke, Gad Asher. Nat Rev Mol Cell Biol 2019
228
15

Circadian clocks in human red blood cells.
John S O'Neill, Akhilesh B Reddy. Nature 2011
527
14

Early aging and age-related pathologies in mice deficient in BMAL1, the core componentof the circadian clock.
Roman V Kondratov, Anna A Kondratova, Victoria Y Gorbacheva, Olena V Vykhovanets, Marina P Antoch. Genes Dev 2006
755
14

Circadian integration of metabolism and energetics.
Joseph Bass, Joseph S Takahashi. Science 2010
13

Circadian rhythms in mitochondrial respiration.
Paul de Goede, Jakob Wefers, Eline Constance Brombacher, Patrick Schrauwen, Andries Kalsbeek. J Mol Endocrinol 2018
80
16


Partitioning circadian transcription by SIRT6 leads to segregated control of cellular metabolism.
Selma Masri, Paul Rigor, Marlene Cervantes, Nicholas Ceglia, Carlos Sebastian, Cuiying Xiao, Manuel Roqueta-Rivera, Chuxia Deng, Timothy F Osborne, Raul Mostoslavsky,[...]. Cell 2014
195
12

Central and peripheral circadian clocks in mammals.
Jennifer A Mohawk, Carla B Green, Joseph S Takahashi. Annu Rev Neurosci 2012
12

Reprogramming of the circadian clock by nutritional challenge.
Kristin L Eckel-Mahan, Vishal R Patel, Sara de Mateo, Ricardo Orozco-Solis, Nicholas J Ceglia, Saurabh Sahar, Sherry A Dilag-Penilla, Kenneth A Dyar, Pierre Baldi, Paolo Sassone-Corsi. Cell 2013
416
12

Diurnal transcriptome atlas of a primate across major neural and peripheral tissues.
Ludovic S Mure, Hiep D Le, Giorgia Benegiamo, Max W Chang, Luis Rios, Ngalla Jillani, Maina Ngotho, Thomas Kariuki, Ouria Dkhissi-Benyahya, Howard M Cooper,[...]. Science 2018
336
12

Circadian clock protein BMAL1 regulates IL-1β in macrophages via NRF2.
James O Early, Deepthi Menon, Cathy A Wyse, Mariana P Cervantes-Silva, Zbigniew Zaslona, Richard G Carroll, Eva M Palsson-McDermott, Stefano Angiari, Dylan G Ryan, Sarah E Corcoran,[...]. Proc Natl Acad Sci U S A 2018
143
12

Muscle insulin sensitivity and glucose metabolism are controlled by the intrinsic muscle clock.
Kenneth A Dyar, Stefano Ciciliot, Lauren E Wright, Rasmus S Biensø, Guidantonio M Tagliazucchi, Vishal R Patel, Mattia Forcato, Marcia I P Paz, Anders Gudiksen, Francesca Solagna,[...]. Mol Metab 2013
240
11

Peroxiredoxins are conserved markers of circadian rhythms.
Rachel S Edgar, Edward W Green, Yuwei Zhao, Gerben van Ooijen, Maria Olmedo, Ximing Qin, Yao Xu, Min Pan, Utham K Valekunja, Kevin A Feeney,[...]. Nature 2012
545
10


Resetting of circadian time in peripheral tissues by glucocorticoid signaling.
A Balsalobre, S A Brown, L Marcacci, F Tronche, C Kellendonk, H M Reichardt, G Schütz, U Schibler. Science 2000
10

The circadian clock maintains cardiac function by regulating mitochondrial metabolism in mice.
Akira Kohsaka, Partha Das, Izumi Hashimoto, Tomomi Nakao, Yoko Deguchi, Sabine S Gouraud, Hidefumi Waki, Yasuteru Muragaki, Masanobu Maeda. PLoS One 2014
68
14


Circadian physiology of metabolism.
Satchidananda Panda. Science 2016
458
10


Obesity and metabolic syndrome in circadian Clock mutant mice.
Fred W Turek, Corinne Joshu, Akira Kohsaka, Emily Lin, Ganka Ivanova, Erin McDearmon, Aaron Laposky, Sue Losee-Olson, Amy Easton, Dalan R Jensen,[...]. Science 2005
10


Circadian Reprogramming in the Liver Identifies Metabolic Pathways of Aging.
Shogo Sato, Guiomar Solanas, Francisca Oliveira Peixoto, Leonardo Bee, Aikaterini Symeonidi, Mark S Schmidt, Charles Brenner, Selma Masri, Salvador Aznar Benitah, Paolo Sassone-Corsi. Cell 2017
181
10

Mop3 is an essential component of the master circadian pacemaker in mammals.
M K Bunger, L D Wilsbacher, S M Moran, C Clendenin, L A Radcliffe, J B Hogenesch, M C Simon, J S Takahashi, C A Bradfield. Cell 2000
10

Coordinated transcription of key pathways in the mouse by the circadian clock.
Satchidananda Panda, Marina P Antoch, Brooke H Miller, Andrew I Su, Andrew B Schook, Marty Straume, Peter G Schultz, Steve A Kay, Joseph S Takahashi, John B Hogenesch. Cell 2002
10

Circadian time signatures of fitness and disease.
Joseph Bass, Mitchell A Lazar. Science 2016
311
10

NAD+ Controls Circadian Reprogramming through PER2 Nuclear Translocation to Counter Aging.
Daniel C Levine, Heekyung Hong, Benjamin J Weidemann, Kathryn M Ramsey, Alison H Affinati, Mark S Schmidt, Jonathan Cedernaes, Chiaki Omura, Rosemary Braun, Choogon Lee,[...]. Mol Cell 2020
65
15

Declining NAD(+) induces a pseudohypoxic state disrupting nuclear-mitochondrial communication during aging.
Ana P Gomes, Nathan L Price, Alvin J Y Ling, Javid J Moslehi, Magdalene K Montgomery, Luis Rajman, James P White, João S Teodoro, Christiane D Wrann, Basil P Hubbard,[...]. Cell 2013
869
9

Defining the Independence of the Liver Circadian Clock.
Kevin B Koronowski, Kenichiro Kinouchi, Patrick-Simon Welz, Jacob G Smith, Valentina M Zinna, Jiejun Shi, Muntaha Samad, Siwei Chen, Christophe N Magnan, Jason M Kinchen,[...]. Cell 2019
132
9

Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.
Daniel Mauvoisin, Jingkui Wang, Céline Jouffe, Eva Martin, Florian Atger, Patrice Waridel, Manfredo Quadroni, Frédéric Gachon, Felix Naef. Proc Natl Acad Sci U S A 2014
210
9

The circadian clock regulates rhythmic activation of the NRF2/glutathione-mediated antioxidant defense pathway to modulate pulmonary fibrosis.
Vanja Pekovic-Vaughan, Julie Gibbs, Hikari Yoshitane, Nan Yang, Dharshika Pathiranage, Baoqiang Guo, Aya Sagami, Keiko Taguchi, David Bechtold, Andrew Loudon,[...]. Genes Dev 2014
172
9

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
9

Cryptochromes mediate rhythmic repression of the glucocorticoid receptor.
Katja A Lamia, Stephanie J Papp, Ruth T Yu, Grant D Barish, N Henriette Uhlenhaut, Johan W Jonker, Michael Downes, Ronald M Evans. Nature 2011
378
9

Clock-genes and mitochondrial respiratory activity: Evidence of a reciprocal interplay.
Rosella Scrima, Olga Cela, Giuseppe Merla, Bartolomeo Augello, Rosa Rubino, Giovanni Quarato, Sabino Fugetto, Marta Menga, Luise Fuhr, Angela Relógio,[...]. Biochim Biophys Acta 2016
30
30

Circadian control of innate immunity in macrophages by miR-155 targeting Bmal1.
Anne M Curtis, Caio T Fagundes, Guangrui Yang, Eva M Palsson-McDermott, Paulina Wochal, Anne F McGettrick, Niamh H Foley, James O Early, Lihong Chen, Hanrui Zhang,[...]. Proc Natl Acad Sci U S A 2015
181
9

Rev-erb-α modulates skeletal muscle oxidative capacity by regulating mitochondrial biogenesis and autophagy.
Estelle Woldt, Yasmine Sebti, Laura A Solt, Christian Duhem, Steve Lancel, Jérôme Eeckhoute, Matthijs K C Hesselink, Charlotte Paquet, Stéphane Delhaye, Youseung Shin,[...]. Nat Med 2013
286
9

Extensive and divergent circadian gene expression in liver and heart.
Kai-Florian Storch, Ovidiu Lipan, Igor Leykin, N Viswanathan, Fred C Davis, Wing H Wong, Charles J Weitz. Nature 2002
9

Physiological significance of a peripheral tissue circadian clock.
Katja A Lamia, Kai-Florian Storch, Charles J Weitz. Proc Natl Acad Sci U S A 2008
727
9

Muscle-specific loss of Bmal1 leads to disrupted tissue glucose metabolism and systemic glucose homeostasis.
Brianna D Harfmann, Elizabeth A Schroder, Maureen T Kachman, Brian A Hodge, Xiping Zhang, Karyn A Esser. Skelet Muscle 2016
109
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.