A citation-based method for searching scientific literature

Houssam Hajjoul, Julien Mathon, Hubert Ranchon, Isabelle Goiffon, Julien Mozziconacci, Benjamin Albert, Pascal Carrivain, Jean-Marc Victor, Olivier Gadal, Kerstin Bystricky, Aurélien Bancaud. Genome Res 2013
Times Cited: 120







List of co-cited articles
1137 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Chromosome dynamics in the yeast interphase nucleus.
P Heun, T Laroche, K Shimada, P Furrer, S M Gasser. Science 2001
345
37

Interphase chromosomes undergo constrained diffusional motion in living cells.
W F Marshall, A Straight, J F Marko, J Swedlow, A Dernburg, A Belmont, A W Murray, D A Agard, J W Sedat. Curr Biol 1997
494
37

Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
33

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
33

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
30

Micron-scale coherence in interphase chromatin dynamics.
Alexandra Zidovska, David A Weitz, Timothy J Mitchison. Proc Natl Acad Sci U S A 2013
132
30

Increased chromosome mobility facilitates homology search during recombination.
Judith Miné-Hattab, Rodney Rothstein. Nat Cell Biol 2012
238
30

Chromatin dynamics in interphase cells revealed by tracking in a two-photon excitation microscope.
Valeria Levi, QiaoQiao Ruan, Matthew Plutz, Andrew S Belmont, Enrico Gratton. Biophys J 2005
159
29

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.
Adrian L Sanborn, Suhas S P Rao, Su-Chen Huang, Neva C Durand, Miriam H Huntley, Andrew I Jewett, Ivan D Bochkov, Dharmaraj Chinnappan, Ashok Cutkosky, Jian Li,[...]. Proc Natl Acad Sci U S A 2015
882
27

Dynamic Organization of Chromatin Domains Revealed by Super-Resolution Live-Cell Imaging.
Tadasu Nozaki, Ryosuke Imai, Mai Tanbo, Ryosuke Nagashima, Sachiko Tamura, Tomomi Tani, Yasumasa Joti, Masaru Tomita, Kayo Hibino, Masato T Kanemaki,[...]. Mol Cell 2017
218
27

Chromatin motion is constrained by association with nuclear compartments in human cells.
Jonathan R Chubb, Shelagh Boyle, Paul Perry, Wendy A Bickmore. Curr Biol 2002
424
26

Increased mobility of double-strand breaks requires Mec1, Rad9 and the homologous recombination machinery.
Vincent Dion, Véronique Kalck, Chihiro Horigome, Benjamin D Towbin, Susan M Gasser. Nat Cell Biol 2012
212
26

Bacterial chromosomal loci move subdiffusively through a viscoelastic cytoplasm.
Stephanie C Weber, Andrew J Spakowitz, Julie A Theriot. Phys Rev Lett 2010
312
25


Nonthermal ATP-dependent fluctuations contribute to the in vivo motion of chromosomal loci.
Stephanie C Weber, Andrew J Spakowitz, Julie A Theriot. Proc Natl Acad Sci U S A 2012
185
23

Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.
Baohui Chen, Luke A Gilbert, Beth A Cimini, Joerg Schnitzbauer, Wei Zhang, Gene-Wei Li, Jason Park, Elizabeth H Blackburn, Jonathan S Weissman, Lei S Qi,[...]. Cell 2013
23

Chromatin fibers are formed by heterogeneous groups of nucleosomes in vivo.
Maria Aurelia Ricci, Carlo Manzo, María Filomena García-Parajo, Melike Lakadamyali, Maria Pia Cosma. Cell 2015
351
23

Spatial partitioning of the regulatory landscape of the X-inactivation centre.
Elphège P Nora, Bryan R Lajoie, Edda G Schulz, Luca Giorgetti, Ikuhiro Okamoto, Nicolas Servant, Tristan Piolot, Nynke L van Berkum, Johannes Meisig, John Sedat,[...]. Nature 2012
21

Local nucleosome dynamics facilitate chromatin accessibility in living mammalian cells.
Saera Hihara, Chan-Gi Pack, Kazunari Kaizu, Tomomi Tani, Tomo Hanafusa, Tadasu Nozaki, Satoko Takemoto, Tomohiko Yoshimi, Hideo Yokota, Naoko Imamoto,[...]. Cell Rep 2012
114
21

A three-dimensional model of the yeast genome.
Zhijun Duan, Mirela Andronescu, Kevin Schutz, Sean McIlwain, Yoo Jung Kim, Choli Lee, Jay Shendure, Stanley Fields, C Anthony Blau, William S Noble. Nature 2010
641
20

Centromere tethering confines chromosome domains.
Jolien Suzanne Verdaasdonk, Paula Andrea Vasquez, Raymond Mario Barry, Timothy Barry, Scott Goodwin, M Gregory Forest, Kerry Bloom. Mol Cell 2013
61
32

Mapping Nucleosome Resolution Chromosome Folding in Yeast by Micro-C.
Tsung-Han S Hsieh, Assaf Weiner, Bryan Lajoie, Job Dekker, Nir Friedman, Oliver J Rando. Cell 2015
331
20


Real-Time Imaging of a Single Gene Reveals Transcription-Initiated Local Confinement.
Thomas Germier, Silvia Kocanova, Nike Walther, Aurélien Bancaud, Haitham Ahmed Shaban, Hafida Sellou, Antonio Zaccaria Politi, Jan Ellenberg, Franck Gallardo, Kerstin Bystricky. Biophys J 2017
87
22

Three-dimensional folding and functional organization principles of the Drosophila genome.
Tom Sexton, Eitan Yaffe, Ephraim Kenigsberg, Frédéric Bantignies, Benjamin Leblanc, Michael Hoichman, Hugues Parrinello, Amos Tanay, Giacomo Cavalli. Cell 2012
19

Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques.
Kerstin Bystricky, Patrick Heun, Lutz Gehlen, Jörg Langowski, Susan M Gasser. Proc Natl Acad Sci U S A 2004
201
19

Structure and dynamics of interphase chromosomes.
Angelo Rosa, Ralf Everaers. PLoS Comput Biol 2008
270
19

Transient anomalous diffusion of telomeres in the nucleus of mammalian cells.
I Bronstein, Y Israel, E Kepten, S Mai, Y Shav-Tal, E Barkai, Y Garini. Phys Rev Lett 2009
241
19

Cohesin and the nucleolus constrain the mobility of spontaneous repair foci.
Vincent Dion, Véronique Kalck, Andrew Seeber, Thomas Schleker, Susan M Gasser. EMBO Rep 2013
71
26

Histone degradation in response to DNA damage enhances chromatin dynamics and recombination rates.
Michael H Hauer, Andrew Seeber, Vijender Singh, Raphael Thierry, Ragna Sack, Assaf Amitai, Mariya Kryzhanovska, Jan Eglinger, David Holcman, Tom Owen-Hughes,[...]. Nat Struct Mol Biol 2017
145
19

ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells.
Horng D Ou, Sébastien Phan, Thomas J Deerinck, Andrea Thor, Mark H Ellisman, Clodagh C O'Shea. Science 2017
418
19

Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ.
Mikhail Eltsov, Kirsty M Maclellan, Kazuhiro Maeshima, Achilleas S Frangakis, Jacques Dubochet. Proc Natl Acad Sci U S A 2008
245
18

Capturing chromosome conformation.
Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
18

Chromosome arm length and nuclear constraints determine the dynamic relationship of yeast subtelomeres.
Pierre Therizols, Tarn Duong, Bernard Dujon, Christophe Zimmer, Emmanuelle Fabre. Proc Natl Acad Sci U S A 2010
96
18



In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition.
C C Robinett, A Straight, G Li, C Willhelm, G Sudlow, A Murray, A S Belmont. J Cell Biol 1996
529
18

Dynamic Nucleosome Movement Provides Structural Information of Topological Chromatin Domains in Living Human Cells.
Soya Shinkai, Tadasu Nozaki, Kazuhiro Maeshima, Yuichi Togashi. PLoS Comput Biol 2016
52
34

Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres.
Eden Fussner, Mike Strauss, Ugljesa Djuric, Ren Li, Kashif Ahmed, Michael Hart, James Ellis, David P Bazett-Jones. EMBO Rep 2012
110
17


Single nucleosome imaging reveals loose genome chromatin networks via active RNA polymerase II.
Ryosuke Nagashima, Kayo Hibino, S S Ashwin, Michael Babokhov, Shin Fujishiro, Ryosuke Imai, Tadasu Nozaki, Sachiko Tamura, Tomomi Tani, Hiroshi Kimura,[...]. J Cell Biol 2019
87
19

Chromatin structure: does the 30-nm fibre exist in vivo?
Kazuhiro Maeshima, Saera Hihara, Mikhail Eltsov. Curr Opin Cell Biol 2010
174
16




A predictive computational model of the dynamic 3D interphase yeast nucleus.
Hua Wong, Hervé Marie-Nelly, Sébastien Herbert, Pascal Carrivain, Hervé Blanc, Romain Koszul, Emmanuelle Fabre, Christophe Zimmer. Curr Biol 2012
104
16

Targeted INO80 enhances subnuclear chromatin movement and ectopic homologous recombination.
Frank R Neumann, Vincent Dion, Lutz R Gehlen, Monika Tsai-Pflugfelder, Roger Schmid, Angela Taddei, Susan M Gasser. Genes Dev 2012
114
16

DNA dynamics during early double-strand break processing revealed by non-intrusive imaging of living cells.
Hicham Saad, Franck Gallardo, Mathieu Dalvai, Nicolas Tanguy-le-Gac, David Lane, Kerstin Bystricky. PLoS Genet 2014
93
17

Nucleosomal arrays self-assemble into supramolecular globular structures lacking 30-nm fibers.
Kazuhiro Maeshima, Ryan Rogge, Sachiko Tamura, Yasumasa Joti, Takaaki Hikima, Heather Szerlong, Christine Krause, Jake Herman, Erik Seidel, Jennifer DeLuca,[...]. EMBO J 2016
106
16

DNA damage signalling targets the kinetochore to promote chromatin mobility.
Jonathan Strecker, Gagan D Gupta, Wei Zhang, Mikhail Bashkurov, Marie-Claude Landry, Laurence Pelletier, Daniel Durocher. Nat Cell Biol 2016
54
29


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.