A citation-based method for searching scientific literature


List of co-cited articles
954 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identification of small molecule activators of cryptochrome.
Tsuyoshi Hirota, Jae Wook Lee, Peter C St John, Mariko Sawa, Keiko Iwaisako, Takako Noguchi, Pagkapol Y Pongsawakul, Tim Sonntag, David K Welsh, David A Brenner,[...]. Science 2012
290
77

SCF(FBXL3) ubiquitin ligase targets cryptochromes at their cofactor pocket.
Weiman Xing, Luca Busino, Thomas R Hinds, Samuel T Marionni, Nabiha H Saifee, Matthew F Bush, Michele Pagano, Ning Zheng. Nature 2013
149
71

Circadian mutant Overtime reveals F-box protein FBXL3 regulation of cryptochrome and period gene expression.
Sandra M Siepka, Seung-Hee Yoo, Junghea Park, Weimin Song, Vivek Kumar, Yinin Hu, Choogon Lee, Joseph S Takahashi. Cell 2007
388
54

SCFFbxl3 controls the oscillation of the circadian clock by directing the degradation of cryptochrome proteins.
Luca Busino, Florian Bassermann, Alessio Maiolica, Choogon Lee, Patrick M Nolan, Sofia I H Godinho, Giulio F Draetta, Michele Pagano. Science 2007
360
50

The after-hours mutant reveals a role for Fbxl3 in determining mammalian circadian period.
Sofia I H Godinho, Elizabeth S Maywood, Linda Shaw, Valter Tucci, Alun R Barnard, Luca Busino, Michele Pagano, Rachel Kendall, Mohamed M Quwailid, M Rosario Romero,[...]. Science 2007
347
43

Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function.
Anna Czarna, Alex Berndt, Hari Raj Singh, Astrid Grudziecki, Andreas G Ladurner, Gyula Timinszky, Achim Kramer, Eva Wolf. Cell 2013
122
38

Competing E3 ubiquitin ligases govern circadian periodicity by degradation of CRY in nucleus and cytoplasm.
Seung-Hee Yoo, Jennifer A Mohawk, Sandra M Siepka, Yongli Shan, Seong Kwon Huh, Hee-Kyung Hong, Izabela Kornblum, Vivek Kumar, Nobuya Koike, Ming Xu,[...]. Cell 2013
211
38

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
870
38

Interaction of circadian clock proteins CRY1 and PER2 is modulated by zinc binding and disulfide bond formation.
Ira Schmalen, Silke Reischl, Thomas Wallach, Roman Klemz, Astrid Grudziecki, J Rajan Prabu, Christian Benda, Achim Kramer, Eva Wolf. Cell 2014
118
33

FBXL21 regulates oscillation of the circadian clock through ubiquitination and stabilization of cryptochromes.
Arisa Hirano, Kanae Yumimoto, Ryosuke Tsunematsu, Masaki Matsumoto, Masaaki Oyama, Hiroko Kozuka-Hata, Tomoki Nakagawa, Darin Lanjakornsiripan, Keiichi I Nakayama, Yoshitaka Fukada. Cell 2013
165
33


mCRY1 and mCRY2 are essential components of the negative limb of the circadian clock feedback loop.
K Kume, M J Zylka, S Sriram, L P Shearman, D R Weaver, X Jin, E S Maywood, M H Hastings, S M Reppert. Cell 1999
31

Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex.
Shannon N Nangle, Clark Rosensweig, Nobuya Koike, Hajime Tei, Joseph S Takahashi, Carla B Green, Ning Zheng. Elife 2014
65
29

AMPK regulates the circadian clock by cryptochrome phosphorylation and degradation.
Katja A Lamia, Uma M Sachdeva, Luciano DiTacchio, Elliot C Williams, Jacqueline G Alvarez, Daniel F Egan, Debbie S Vasquez, Henry Juguilon, Satchidananda Panda, Reuben J Shaw,[...]. Science 2009
589
28

Mammalian Cry1 and Cry2 are essential for maintenance of circadian rhythms.
G T van der Horst, M Muijtjens, K Kobayashi, R Takano, S Kanno, M Takao, J de Wit, A Verkerk, A P Eker, D van Leenen,[...]. Nature 1999
985
28

Cryptochromes mediate rhythmic repression of the glucocorticoid receptor.
Katja A Lamia, Stephanie J Papp, Ruth T Yu, Grant D Barish, N Henriette Uhlenhaut, Johan W Jonker, Michael Downes, Ronald M Evans. Nature 2011
360
26

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
24

Cryptochrome mediates circadian regulation of cAMP signaling and hepatic gluconeogenesis.
Eric E Zhang, Yi Liu, Renaud Dentin, Pagkapol Y Pongsawakul, Andrew C Liu, Tsuyoshi Hirota, Dmitri A Nusinow, Xiujie Sun, Severine Landais, Yuzo Kodama,[...]. Nat Med 2010
351
24

SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
920
22

Differential regulation of mammalian period genes and circadian rhythmicity by cryptochromes 1 and 2.
M H Vitaterna, C P Selby, T Todo, H Niwa, C Thompson, E M Fruechte, K Hitomi, R J Thresher, T Ishikawa, J Miyazaki,[...]. Proc Natl Acad Sci U S A 1999
514
22

A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
22

Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation.
Erik J Eide, Margaret F Woolf, Heeseog Kang, Peter Woolf, William Hurst, Fernando Camacho, Erica L Vielhaber, Andrew Giovanni, David M Virshup. Mol Cell Biol 2005
353
19

Identification of diverse modulators of central and peripheral circadian clocks by high-throughput chemical screening.
Zheng Chen, Seung-Hee Yoo, Yong-Sung Park, Keon-Hee Kim, Shuguang Wei, Ethan Buhr, Zeng-You Ye, Hui-Lin Pan, Joseph S Takahashi. Proc Natl Acad Sci U S A 2012
126
19

Updated structure of Drosophila cryptochrome.
Colin Levy, Brian D Zoltowski, Alex R Jones, Anand T Vaidya, Deniz Top, Joanne Widom, Michael W Young, Nigel S Scrutton, Brian R Crane, David Leys. Nature 2013
63
19

Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex.
Nian Huang, Yogarany Chelliah, Yongli Shan, Clinton A Taylor, Seung-Hee Yoo, Carrie Partch, Carla B Green, Hong Zhang, Joseph S Takahashi. Science 2012
171
19

Entrainment of disrupted circadian behavior through inhibition of casein kinase 1 (CK1) enzymes.
Qing-Jun Meng, Elizabeth S Maywood, David A Bechtold, Wei-Qun Lu, Jian Li, Julie E Gibbs, Sandrine M Dupré, Johanna E Chesham, Francis Rajamohan, John Knafels,[...]. Proc Natl Acad Sci U S A 2010
163
19

A chemical biology approach reveals period shortening of the mammalian circadian clock by specific inhibition of GSK-3beta.
Tsuyoshi Hirota, Warren G Lewis, Andrew C Liu, Jae Wook Lee, Peter G Schultz, Steve A Kay. Proc Natl Acad Sci U S A 2008
209
19

High-throughput chemical screen identifies a novel potent modulator of cellular circadian rhythms and reveals CKIα as a clock regulatory kinase.
Tsuyoshi Hirota, Jae Wook Lee, Warren G Lewis, Eric E Zhang, Ghislain Breton, Xianzhong Liu, Michael Garcia, Eric C Peters, Jean-Pierre Etchegaray, David Traver,[...]. PLoS Biol 2010
158
19

An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome.
K L Toh, C R Jones, Y He, E J Eide, W A Hinz, D M Virshup, L J Ptácek, Y H Fu. Science 2001
918
19

C-H activation generates period-shortening molecules that target cryptochrome in the mammalian circadian clock.
Tsuyoshi Oshima, Iori Yamanaka, Anupriya Kumar, Junichiro Yamaguchi, Taeko Nishiwaki-Ohkawa, Kei Muto, Rika Kawamura, Tsuyoshi Hirota, Kazuhiro Yagita, Stephan Irle,[...]. Angew Chem Int Ed Engl 2015
41
26

Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder.
Alina Patke, Patricia J Murphy, Onur Emre Onat, Ana C Krieger, Tayfun Özçelik, Scott S Campbell, Michael W Young. Cell 2017
168
19

The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
490
17

Posttranslational mechanisms regulate the mammalian circadian clock.
C Lee, J P Etchegaray, F R Cagampang, A S Loudon, S M Reppert. Cell 2001
842
17

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
956
17



A functional genomics strategy reveals Rora as a component of the mammalian circadian clock.
Trey K Sato, Satchidananda Panda, Loren J Miraglia, Teresa M Reyes, Radu D Rudic, Peter McNamara, Kinnery A Naik, Garret A FitzGerald, Steve A Kay, John B Hogenesch. Neuron 2004
724
17

Intercellular coupling confers robustness against mutations in the SCN circadian clock network.
Andrew C Liu, David K Welsh, Caroline H Ko, Hien G Tran, Eric E Zhang, Aaron A Priest, Ethan D Buhr, Oded Singer, Kirsten Meeker, Inder M Verma,[...]. Cell 2007
497
17

CKIepsilon/delta-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock.
Yasushi Isojima, Masato Nakajima, Hideki Ukai, Hiroshi Fujishima, Rikuhiro G Yamada, Koh-hei Masumoto, Reiko Kiuchi, Mayumi Ishida, Maki Ukai-Tadenuma, Yoichi Minami,[...]. Proc Natl Acad Sci U S A 2009
175
17

Phosphorylation of the cryptochrome 1 C-terminal tail regulates circadian period length.
Peng Gao, Seung-Hee Yoo, Kyung-Jong Lee, Clark Rosensweig, Joseph S Takahashi, Benjamin P Chen, Carla B Green. J Biol Chem 2013
52
19

Identification and validation of cryptochrome inhibitors that modulate the molecular circadian clock.
Sung Kook Chun, Jaebong Jang, Sooyoung Chung, Hwayoung Yun, Nam-Jung Kim, Jong-Wha Jung, Gi Hoon Son, Young-Ger Suh, Kyungjin Kim. ACS Chem Biol 2014
38
26

PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues.
Seung-Hee Yoo, Shin Yamazaki, Phillip L Lowrey, Kazuhiro Shimomura, Caroline H Ko, Ethan D Buhr, Sandra M Siepka, Hee-Kyung Hong, Won Jun Oh, Ook Joon Yoo,[...]. Proc Natl Acad Sci U S A 2004
17

Regulation of circadian behaviour and metabolism by synthetic REV-ERB agonists.
Laura A Solt, Yongjun Wang, Subhashis Banerjee, Travis Hughes, Douglas J Kojetin, Thomas Lundasen, Youseung Shin, Jin Liu, Michael D Cameron, Romain Noel,[...]. Nature 2012
477
17

Post-translational modifications regulate the ticking of the circadian clock.
Monica Gallego, David M Virshup. Nat Rev Mol Cell Biol 2007
560
17

An evolutionary hotspot defines functional differences between CRYPTOCHROMES.
Clark Rosensweig, Kimberly A Reynolds, Peng Gao, Isara Laothamatas, Yongli Shan, Rama Ranganathan, Joseph S Takahashi, Carla B Green. Nat Commun 2018
44
22

Isoform-selective regulation of mammalian cryptochromes.
Simon Miller, You Lee Son, Yoshiki Aikawa, Eri Makino, Yoshiko Nagai, Ashutosh Srivastava, Tsuyoshi Oshima, Akiko Sugiyama, Aya Hara, Kazuhiro Abe,[...]. Nat Chem Biol 2020
29
34

Molecular architecture of the mammalian circadian clock.
Carrie L Partch, Carla B Green, Joseph S Takahashi. Trends Cell Biol 2014
746
15

Delay in feedback repression by cryptochrome 1 is required for circadian clock function.
Maki Ukai-Tadenuma, Rikuhiro G Yamada, Haiyan Xu, Jürgen A Ripperger, Andrew C Liu, Hiroki R Ueda. Cell 2011
177
15

Interacting molecular loops in the mammalian circadian clock.
L P Shearman, S Sriram, D R Weaver, E S Maywood, I Chaves, B Zheng, K Kume, C C Lee, G T van der Horst, M H Hastings,[...]. Science 2000
15

REV-ERB and ROR nuclear receptors as drug targets.
Douglas J Kojetin, Thomas P Burris. Nat Rev Drug Discov 2014
317
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.