A citation-based method for searching scientific literature

Cornelia Dorn, Marcel Grunert, Silke R Sperling. Brief Funct Genomics 2014
Times Cited: 10







List of co-cited articles
26 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


De novo mutations in histone-modifying genes in congenital heart disease.
Samir Zaidi, Murim Choi, Hiroko Wakimoto, Lijiang Ma, Jianming Jiang, John D Overton, Angela Romano-Adesman, Robert D Bjornson, Roger E Breitbart, Kerry K Brown,[...]. Nature 2013
517
40

Genetics of congenital heart disease: the glass half empty.
Akl C Fahed, Bruce D Gelb, J G Seidman, Christine E Seidman. Circ Res 2013
304
30

Targeted next-generation sequencing identifies pathogenic variants in familial congenital heart disease.
Gillian M Blue, Edwin P Kirk, Eleni Giannoulatou, Sally L Dunwoodie, Joshua W K Ho, Desiree C K Hilton, Susan M White, Gary F Sholler, Richard P Harvey, David S Winlaw. J Am Coll Cardiol 2014
51
30

Targeted capture and massively parallel sequencing of 12 human exomes.
Sarah B Ng, Emily H Turner, Peggy D Robertson, Steven D Flygare, Abigail W Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E Eichler,[...]. Nature 2009
20

Sequencing depth and coverage: key considerations in genomic analyses.
David Sims, Ian Sudbery, Nicholas E Ilott, Andreas Heger, Chris P Ponting. Nat Rev Genet 2014
614
20

Towards clinical molecular diagnosis of inherited cardiac conditions: a comparison of bench-top genome DNA sequencers.
Xinzhong Li, Andrew J Buckton, Samuel L Wilkinson, Shibu John, Roddy Walsh, Tomas Novotny, Iveta Valaskova, Manu Gupta, Laurence Game, Paul J R Barton,[...]. PLoS One 2013
55
20

Targeted next-generation sequencing can replace Sanger sequencing in clinical diagnostics.
Birgit Sikkema-Raddatz, Lennart F Johansson, Eddy N de Boer, Rowida Almomani, Ludolf G Boven, Maarten P van den Berg, Karin Y van Spaendonck-Zwarts, J Peter van Tintelen, Rolf H Sijmons, Jan D H Jongbloed,[...]. Hum Mutat 2013
179
20

Noninherited risk factors and congenital cardiovascular defects: current knowledge: a scientific statement from the American Heart Association Council on Cardiovascular Disease in the Young: endorsed by the American Academy of Pediatrics.
Kathy J Jenkins, Adolfo Correa, Jeffrey A Feinstein, Lorenzo Botto, Amy E Britt, Stephen R Daniels, Marsha Elixson, Carole A Warnes, Catherine L Webb. Circulation 2007
455
20

Epigenetic mechanisms in cardiac development and disease.
Marcus Vallaster, Caroline Dacwag Vallaster, Sean M Wu. Acta Biochim Biophys Sin (Shanghai) 2012
42
20

Congenital heart disease: current knowledge about causes and inheritance.
Gillian M Blue, Edwin P Kirk, Gary F Sholler, Richard P Harvey, David S Winlaw. Med J Aust 2012
123
20

Inheritance of congenital heart disease.
J W Roos-Hesselink, W S Kerstjens-Frederikse, F J Meijboom, P G Pieper. Neth Heart J 2005
16
20

An Nkx2-5/Bmp2/Smad1 negative feedback loop controls heart progenitor specification and proliferation.
Owen W J Prall, Mary K Menon, Mark J Solloway, Yusuke Watanabe, Stéphane Zaffran, Fanny Bajolle, Christine Biben, Jim J McBride, Bronwyn R Robertson, Hervé Chaulet,[...]. Cell 2007
359
20

Submicroscopic chromosomal imbalances detected by array-CGH are a frequent cause of congenital heart defects in selected patients.
Bernard Thienpont, Luc Mertens, Thomy de Ravel, Benedicte Eyskens, Derize Boshoff, Nicole Maas, Jean-Pierre Fryns, Marc Gewillig, Joris R Vermeesch, Koen Devriendt. Eur Heart J 2007
133
20

Transcription factor pathways and congenital heart disease.
David J McCulley, Brian L Black. Curr Top Dev Biol 2012
181
20

Lifetime prevalence of congenital heart disease in the general population from 2000 to 2010.
Ariane J Marelli, Raluca Ionescu-Ittu, Andrew S Mackie, Liming Guo, Nandini Dendukuri, Mohammed Kaouache. Circulation 2014
504
20

Challenges of interpreting copy number variation in syndromic and non-syndromic congenital heart defects.
J Breckpot, B Thienpont, Y Arens, L C Tranchevent, J R Vermeesch, Y Moreau, M Gewillig, K Devriendt. Cytogenet Genome Res 2011
41
20


Large-scale discovery of enhancers from human heart tissue.
Dalit May, Matthew J Blow, Tommy Kaplan, David J McCulley, Brian C Jensen, Jennifer A Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Crystal Wright,[...]. Nat Genet 2011
184
20

Congenital heart disease caused by mutations in the transcription factor NKX2-5.
J J Schott, D W Benson, C T Basson, W Pease, G M Silberbach, J P Moak, B J Maron, C E Seidman, J G Seidman. Science 1998
888
20

A genetic blueprint for cardiac development.
D Srivastava, E N Olson. Nature 2000
438
20


Congenital heart disease: the crossroads of genetics, epigenetics and environment.
Cecilia Vecoli, Silvia Pulignani, Ilenia Foffa, Maria Grazia Andreassi. Curr Genomics 2014
50
20

The diagnostic value of next generation sequencing in familial nonsyndromic congenital heart defects.
Yaojuan Jia, Jacoba J Louw, Jeroen Breckpot, Bert Callewaert, Catherine Barrea, Yves Sznajer, Marc Gewillig, Erika Souche, Luc Dehaspe, Joris Robert Vermeesch,[...]. Am J Med Genet A 2015
31
20

20-year survival of children born with congenital anomalies: a population-based study.
Peter W G Tennant, Mark S Pearce, Mary Bythell, Judith Rankin. Lancet 2010
226
20

DbVar and DGVa: public archives for genomic structural variation.
Ilkka Lappalainen, John Lopez, Lisa Skipper, Timothy Hefferon, J Dylan Spalding, John Garner, Chao Chen, Michael Maguire, Matt Corbett, George Zhou,[...]. Nucleic Acids Res 2013
119
20

The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
Jacqueline MacArthur, Emily Bowler, Maria Cerezo, Laurent Gil, Peggy Hall, Emma Hastings, Heather Junkins, Aoife McMahon, Annalisa Milano, Joannella Morales,[...]. Nucleic Acids Res 2017
20


Factors influencing participation in a population-based biorepository for childhood heart disease.
Tanya Papaz, Mina Safi, Ashok-Kumar Manickaraj, Carly Ogaki, Jennifer Breaton Kyryliuk, Liz Burrill, Christine Dodge, Catherine Chant-Gambacort, Laura-Lee Walter, Herschel Rosenberg,[...]. Pediatrics 2012
9
11

A comparative analysis of exome capture.
Jennifer S Parla, Ivan Iossifov, Ian Grabill, Mona S Spector, Melissa Kramer, W Richard McCombie. Genome Biol 2011
85
10

An analysis of exome sequencing for diagnostic testing of the genes associated with muscle disease and spastic paraplegia.
Cristina Dias, Murat Sincan, Praveen F Cherukuri, Rosemarie Rupps, Yan Huang, Hannah Briemberg, Kathryn Selby, James C Mullikin, Thomas C Markello, David R Adams,[...]. Hum Mutat 2012
26
10

Tracking and coordinating an international curation effort for the CCDS Project.
Rachel A Harte, Catherine M Farrell, Jane E Loveland, Marie-Marthe Suner, Laurens Wilming, Bronwen Aken, Daniel Barrell, Adam Frankish, Craig Wallin, Steve Searle,[...]. Database (Oxford) 2012
44
10


The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes.
Kim D Pruitt, Jennifer Harrow, Rachel A Harte, Craig Wallin, Mark Diekhans, Donna R Maglott, Steve Searle, Catherine M Farrell, Jane E Loveland, Barbara J Ruef,[...]. Genome Res 2009
370
10

ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
10

The GENCODE exome: sequencing the complete human exome.
Alison J Coffey, Felix Kokocinski, Maria S Calafato, Carol E Scott, Priit Palta, Eleanor Drury, Christopher J Joyce, Emily M Leproust, Jen Harrow, Sarah Hunt,[...]. Eur J Hum Genet 2011
45
10

Quantifying single nucleotide variant detection sensitivity in exome sequencing.
Alison M Meynert, Louise S Bicknell, Matthew E Hurles, Andrew P Jackson, Martin S Taylor. BMC Bioinformatics 2013
54
10

Assessing the necessity of confirmatory testing for exome-sequencing results in a clinical molecular diagnostic laboratory.
Samuel P Strom, Hane Lee, Kingshuk Das, Eric Vilain, Stanley F Nelson, Wayne W Grody, Joshua L Deignan. Genet Med 2014
86
10

Clinical interpretation and implications of whole-genome sequencing.
Frederick E Dewey, Megan E Grove, Cuiping Pan, Benjamin A Goldstein, Jonathan A Bernstein, Hassan Chaib, Jason D Merker, Rachel L Goldfeder, Gregory M Enns, Sean P David,[...]. JAMA 2014
285
10

Comparison of solution-based exome capture methods for next generation sequencing.
Anna-Maija Sulonen, Pekka Ellonen, Henrikki Almusa, Maija Lepistö, Samuli Eldfors, Sari Hannula, Timo Miettinen, Henna Tyynismaa, Perttu Salo, Caroline Heckman,[...]. Genome Biol 2011
179
10

Variant callers for next-generation sequencing data: a comparison study.
Xiangtao Liu, Shizhong Han, Zuoheng Wang, Joel Gelernter, Bao-Zhu Yang. PLoS One 2013
89
10

Detecting somatic point mutations in cancer genome sequencing data: a comparison of mutation callers.
Qingguo Wang, Peilin Jia, Fei Li, Haiquan Chen, Hongbin Ji, Donald Hucks, Kimberly Brown Dahlman, William Pao, Zhongming Zhao. Genome Med 2013
111
10

Efficient targeted resequencing of human germline and cancer genomes by oligonucleotide-selective sequencing.
Samuel Myllykangas, Jason D Buenrostro, Georges Natsoulis, John M Bell, Hanlee P Ji. Nat Biotechnol 2011
31
10

DNA sequencing: clinical applications of new DNA sequencing technologies.
Frederick E Dewey, Stephen Pan, Matthew T Wheeler, Stephen R Quake, Euan A Ashley. Circulation 2012
42
10

The UCSC Known Genes.
Fan Hsu, W James Kent, Hiram Clawson, Robert M Kuhn, Mark Diekhans, David Haussler. Bioinformatics 2006
385
10

The UCSC Table Browser data retrieval tool.
Donna Karolchik, Angela S Hinrichs, Terrence S Furey, Krishna M Roskin, Charles W Sugnet, David Haussler, W James Kent. Nucleic Acids Res 2004
10

Coverage bias and sensitivity of variant calling for four whole-genome sequencing technologies.
Nora Rieber, Marc Zapatka, Bärbel Lasitschka, David Jones, Paul Northcott, Barbara Hutter, Natalie Jäger, Marcel Kool, Michael Taylor, Peter Lichter,[...]. PLoS One 2013
46
10

Current status and new features of the Consensus Coding Sequence database.
Catherine M Farrell, Nuala A O'Leary, Rachel A Harte, Jane E Loveland, Laurens G Wilming, Craig Wallin, Mark Diekhans, Daniel Barrell, Stephen M J Searle, Bronwen Aken,[...]. Nucleic Acids Res 2014
108
10

What can exome sequencing do for you?
Jacek Majewski, Jeremy Schwartzentruber, Emilie Lalonde, Alexandre Montpetit, Nada Jabado. J Med Genet 2011
209
10

A direct comparison of next generation sequencing enrichment methods using an aortopathy gene panel- clinical diagnostics perspective.
Whitney L Wooderchak-Donahue, Brendan O'Fallon, Larissa V Furtado, Jacob D Durtschi, Parker Plant, Perry G Ridge, Alan F Rope, Angela T Yetman, Pinar Bayrak-Toydemir. BMC Med Genomics 2012
26
10

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.