A citation-based method for searching scientific literature

Shiying Wu, Yu Chen, Guanzhong Mao, Stefan Trobro, Marek Kwiatkowski, Leif A Kirsebom. Nucleic Acids Res 2014
Times Cited: 6







List of co-cited articles
37 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
66

Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
196
66

Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
30
50

Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
126
50

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
71
50

The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning.
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
36
50

Cleavage mediated by the P15 domain of bacterial RNase P RNA.
Ema Kikovska, Shiying Wu, Guanzhong Mao, Leif A Kirsebom. Nucleic Acids Res 2012
7
33


Catalysis by RNase P RNA: unique features and unprecedented active site plasticity.
Tina Persson, Simona Cuzic, Roland K Hartmann. J Biol Chem 2003
43
33


Cleavage mediated by the catalytic domain of bacterial RNase P RNA.
Shiying Wu, Ema Kikovska, Magnus Lindell, Leif A Kirsebom. J Mol Biol 2012
6
33


Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates.
J F Milligan, D R Groebe, G W Witherell, O C Uhlenbeck. Nucleic Acids Res 1987
33

RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
384
33


The naturally trans-acting ribozyme RNase P RNA has leadzyme properties.
Ema Kikovska, Nils-Egil Mikkelsen, Leif A Kirsebom. Nucleic Acids Res 2005
17
33


The pre-tRNA nucleotide base and 2'-hydroxyl at N(-1) contribute to fidelity in tRNA processing by RNase P.
Nathan H Zahler, Lei Sun, Eric L Christian, Michael E Harris. J Mol Biol 2005
38
33


Cross talk between the +73/294 interaction and the cleavage site in RNase P RNA mediated cleavage.
Mathias Brännvall, Ema Kikovska, Leif A Kirsebom. Nucleic Acids Res 2004
29
33

A single Arabidopsis organellar protein has RNase P activity.
Anthony Gobert, Bernard Gutmann, Andreas Taschner, Markus Gössringer, Johann Holzmann, Roland K Hartmann, Walter Rossmanith, Philippe Giegé. Nat Struct Mol Biol 2010
146
33

The exocyclic amine at the RNase P cleavage site contributes to substrate binding and catalysis.
Ema Kikovska, Mathias Brännvall, Leif A Kirsebom. J Mol Biol 2006
20
33

Functional coupling between a distal interaction and the cleavage site in bacterial RNase-P-RNA-mediated cleavage.
Shiying Wu, Yu Chen, Magnus Lindell, Guanzhong Mao, Leif A Kirsebom. J Mol Biol 2011
12
33

Discovery of a minimal form of RNase P in Pyrobaculum.
Lien B Lai, Patricia P Chan, Aaron E Cozen, David L Bernick, James W Brown, Venkat Gopalan, Todd M Lowe. Proc Natl Acad Sci U S A 2010
34
33

Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.
Lien B Lai, Agustín Vioque, Leif A Kirsebom, Venkat Gopalan. FEBS Lett 2010
99
33

External guide sequences for an RNA enzyme.
A C Forster, S Altman. Science 1990
245
33

Metal ion cooperativity in ribozyme cleavage of RNA.
M Brännvall, L A Kirsebom. Proc Natl Acad Sci U S A 2001
46
33


Dissecting functional cooperation among protein subunits in archaeal RNase P, a catalytic ribonucleoprotein complex.
Wen-Yi Chen, Dileep K Pulukkunat, I-Ming Cho, Hsin-Yue Tsai, Venkat Gopalan. Nucleic Acids Res 2010
37
33


RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
179
33

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
33

Structural studies of RNase P.
Alfonso Mondragón. Annu Rev Biophys 2013
47
33

The Diversity of Ribonuclease P: Protein and RNA Catalysts with Analogous Biological Functions.
Bradley P Klemm, Nancy Wu, Yu Chen, Xin Liu, Kipchumba J Kaitany, Michael J Howard, Carol A Fierke. Biomolecules 2016
37
33


A divalent cation stabilizes the active conformation of the B. subtilis RNase P x pre-tRNA complex: a role for an inner-sphere metal ion in RNase P.
John Hsieh, Kristin S Koutmou, David Rueda, Markos Koutmos, Nils G Walter, Carol A Fierke. J Mol Biol 2010
23
33

Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
159
33

The RNA World: molecular cooperation at the origins of life.
Paul G Higgs, Niles Lehman. Nat Rev Genet 2015
215
16


Investigation of de novo totally random biosequences, Part II: On the folding frequency in a totally random library of de novo proteins obtained by phage display.
Cristiano Chiarabelli, Jan W Vrijbloed, Davide De Lucrezia, Richard M Thomas, Pasquale Stano, Fabio Polticelli, Tiziana Ottone, Ester Papa, Pier Luigi Luisi. Chem Biodivers 2006
37
16


The road to non-enzymatic molecular networks.
Zehavit Dadon, Nathaniel Wagner, Gonen Ashkenasy. Angew Chem Int Ed Engl 2008
85
16

Emergence of symbiosis in peptide self-replication through a hypercyclic network.
D H Lee, K Severin, Y Yokobayashi, M R Ghadiri. Nature 1997
132
16

A brief review of molecular information theory.
Thomas D Schneider. Nano Commun Netw 2010
34
16

The compositional and evolutionary logic of metabolism.
Rogier Braakman, Eric Smith. Phys Biol 2013
55
16





RNA-catalyzed RNA polymerization: accurate and general RNA-templated primer extension.
W K Johnston, P J Unrau, M S Lawrence, M E Glasner, D P Bartel. Science 2001
367
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.