A citation-based method for searching scientific literature

Nicoletta Guaragnella, Vanessa Palermo, Alvaro Galli, Loredana Moro, Cristina Mazzoni, Sergio Giannattasio. FEMS Yeast Res 2014
Times Cited: 34







List of co-cited articles
253 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


New insights into cancer-related proteins provided by the yeast model.
Clara Pereira, Isabel Coutinho, Joana Soares, Cláudia Bessa, Mariana Leão, Lucília Saraiva. FEBS J 2012
35
29

Yeast: an experimental organism for 21st Century biology.
David Botstein, Gerald R Fink. Genetics 2011
268
26


Apoptosis in yeast: triggers, pathways, subroutines.
D Carmona-Gutierrez, T Eisenberg, S Büttner, C Meisinger, G Kroemer, F Madeo. Cell Death Differ 2010
334
17


Yeast as a model for medical and medicinal research.
Willem H Mager, Joris Winderickx. Trends Pharmacol Sci 2005
134
14

Mammalian p53 can function as a transcription factor in yeast.
E Schärer, R Iggo. Nucleic Acids Res 1992
211
14

Yeast growth in raffinose results in resistance to acetic-acid induced programmed cell death mostly due to the activation of the mitochondrial retrograde pathway.
Nicoletta Guaragnella, Maša Ždralević, Paolo Lattanzio, Domenico Marzulli, Tammy Pracheil, Zhengchang Liu, Salvatore Passarella, Ersilia Marra, Sergio Giannattasio. Biochim Biophys Acta 2013
28
14

Saccharomyces cerevisiae commits to a programmed cell death process in response to acetic acid.
Paula Ludovico, Maria João Sousa, Manuel T Silva, Cecı Lia Leão, Manuela Côrte-Real. Microbiology (Reading) 2001
363
11

Effect of the expression of BRCA2 on spontaneous homologous recombination and DNA damage-induced nuclear foci in Saccharomyces cerevisiae.
Laura Spugnesi, Cristina Balia, Anita Collavoli, Elisabetta Falaschi, Valentina Quercioli, Maria Adelaide Caligo, Alvaro Galli. Mutagenesis 2013
14
28

Cytochrome c is released from coupled mitochondria of yeast en route to acetic acid-induced programmed cell death and can work as an electron donor and a ROS scavenger.
Sergio Giannattasio, Anna Atlante, Lucia Antonacci, Nicoletta Guaragnella, Paolo Lattanzio, Salvatore Passarella, Ersilia Marra. FEBS Lett 2008
46
11

Yeast acetic acid-induced programmed cell death can occur without cytochrome c release which requires metacaspase YCA1.
Nicoletta Guaragnella, Antonella Bobba, Salvatore Passarella, Ersilia Marra, Sergio Giannattasio. FEBS Lett 2010
43
11

Novel simplified yeast-based assays of regulators of p53-MDMX interaction and p53 transcriptional activity.
Mariana Leão, Sara Gomes, Joana Soares, Cláudia Bessa, Cláudia Maciel, Yari Ciribilli, Clara Pereira, Alberto Inga, Lucília Saraiva. FEBS J 2013
13
30

Global analysis of protein localization in budding yeast.
Won-Ki Huh, James V Falvo, Luke C Gerke, Adam S Carroll, Russell W Howson, Jonathan S Weissman, Erin K O'Shea. Nature 2003
11

Simple identification of dominant p53 mutants by a yeast functional assay.
A Inga, S Cresta, P Monti, A Aprile, G Scott, A Abbondandolo, R Iggo, G Fronza. Carcinogenesis 1997
41
11

p53 transactivation and the impact of mutations, cofactors and small molecules using a simplified yeast-based screening system.
Virginia Andreotti, Yari Ciribilli, Paola Monti, Alessandra Bisio, Mattia Lion, Jennifer Jordan, Gilberto Fronza, Paola Menichini, Michael A Resnick, Alberto Inga. PLoS One 2011
37
11

Evolution. Systematic humanization of yeast genes reveals conserved functions and genetic modularity.
Aashiq H Kachroo, Jon M Laurent, Christopher M Yellman, Austin G Meyer, Claus O Wilke, Edward M Marcotte. Science 2015
196
11

From the baker to the bedside: yeast models of Parkinson's disease.
Regina Menezes, Sandra Tenreiro, Diana Macedo, Cláudia N Santos, Tiago F Outeiro. Microb Cell 2015
37
11

Efforts to make and apply humanized yeast.
Jon M Laurent, Jonathan H Young, Aashiq H Kachroo, Edward M Marcotte. Brief Funct Genomics 2016
42
11

Cytochrome c release and mitochondria involvement in programmed cell death induced by acetic acid in Saccharomyces cerevisiae.
Paula Ludovico, Fernando Rodrigues, Agostinho Almeida, Manuel T Silva, Antoni Barrientos, Manuela Côrte-Real. Mol Biol Cell 2002
288
8

ADP/ATP carrier is required for mitochondrial outer membrane permeabilization and cytochrome c release in yeast apoptosis.
Clara Pereira, Nadine Camougrand, Stéphen Manon, Maria João Sousa, Manuela Côrte-Real. Mol Microbiol 2007
113
8


Achievements and perspectives in yeast acetic acid-induced programmed cell death pathways.
Nicoletta Guaragnella, Lucia Antonacci, Salvatore Passarella, Ersilia Marra, Sergio Giannattasio. Biochem Soc Trans 2011
34
8

The role of mitochondria in yeast programmed cell death.
Nicoletta Guaragnella, Maša Zdralević, Lucia Antonacci, Salvatore Passarella, Ersilia Marra, Sergio Giannattasio. Front Oncol 2012
47
8

Mitochondrial signaling: the retrograde response.
Ronald A Butow, Narayan G Avadhani. Mol Cell 2004
644
8

Targeting the DNA repair defect in BRCA mutant cells as a therapeutic strategy.
Hannah Farmer, Nuala McCabe, Christopher J Lord, Andrew N J Tutt, Damian A Johnson, Tobias B Richardson, Manuela Santarosa, Krystyna J Dillon, Ian Hickson, Charlotte Knights,[...]. Nature 2005
8

Tumor cell energy metabolism and its common features with yeast metabolism.
R Diaz-Ruiz, S Uribe-Carvajal, A Devin, M Rigoulet. Biochim Biophys Acta 2009
89
8

Silencing of BRCA2 decreases anoikis and its heterologous expression sensitizes yeast cells to acetic acid-induced programmed cell death.
Nicoletta Guaragnella, Ersilia Marra, Alvaro Galli, Loredana Moro, Sergio Giannattasio. Apoptosis 2014
4
75

The role of mitochondria in apoptosis*.
Chunxin Wang, Richard J Youle. Annu Rev Genet 2009
982
8

Stress-related mitochondrial components and mitochondrial genome as targets of anticancer therapy.
Sergio Giannattasio, Nicoletta Guaragnella, Arnaldo A Arbini, Loredana Moro. Chem Biol Drug Des 2013
15
20

Protein kinase A and Sch9 cooperatively regulate induction of autophagy in Saccharomyces cerevisiae.
Tomohiro Yorimitsu, Shadia Zaman, James R Broach, Daniel J Klionsky. Mol Biol Cell 2007
174
8

Discovery of a new small-molecule inhibitor of p53-MDM2 interaction using a yeast-based approach.
Mariana Leão, Clara Pereira, Alessandra Bisio, Yari Ciribilli, Ana M Paiva, Neuza Machado, Andreia Palmeira, Miguel X Fernandes, Emília Sousa, Madalena Pinto,[...]. Biochem Pharmacol 2013
41
8

Human p53 induces cell death and downregulates thioredoxin expression in Saccharomyces cerevisiae.
Ines Yacoubi Hadj Amor, Kamel Smaoui, Ines Chaabène, Imed Mabrouk, Lamia Djemal, Henda Elleuch, Michèle Allouche, Raja Mokdad-Gargouri, Ali Gargouri. FEMS Yeast Res 2008
24
12

An AIF orthologue regulates apoptosis in yeast.
Silke Wissing, Paula Ludovico, Eva Herker, Sabrina Büttner, Silvia M Engelhardt, Thorsten Decker, Alexander Link, Astrid Proksch, Fernando Rodrigues, Manuela Corte-Real,[...]. J Cell Biol 2004
307
8

Mitochondrial fission proteins regulate programmed cell death in yeast.
Yihru Fannjiang, Wen-Chih Cheng, Sarah J Lee, Bing Qi, Jonathan Pevsner, J Michael McCaffery, R Blake Hill, Gorka Basañez, J Marie Hardwick. Genes Dev 2004
242
8

A caspase-related protease regulates apoptosis in yeast.
Frank Madeo, Eva Herker, Corinna Maldener, Silke Wissing, Stephan Lächelt, Mark Herlan, Markus Fehr, Kirsten Lauber, Stephan J Sigrist, Sebastian Wesselborg,[...]. Mol Cell 2002
663
8

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a specific substrate of yeast metacaspase.
A Silva, B Almeida, B Sampaio-Marques, M I R Reis, S Ohlmeier, F Rodrigues, A do Vale, P Ludovico. Biochim Biophys Acta 2011
34
8

Mitochondrial degradation in acetic acid-induced yeast apoptosis: the role of Pep4 and the ADP/ATP carrier.
Clara Pereira, Susana Chaves, Sara Alves, Bénédict Salin, Nadine Camougrand, Stéphen Manon, Maria João Sousa, Manuela Côrte-Real. Mol Microbiol 2010
63
8

Life with 6000 genes.
A Goffeau, B G Barrell, H Bussey, R W Davis, B Dujon, H Feldmann, F Galibert, J D Hoheisel, C Jacq, M Johnston,[...]. Science 1996
8

Harnessing the power of yeast to unravel the molecular basis of neurodegeneration.
Sandra Tenreiro, Matthias C Munder, Simon Alberti, Tiago F Outeiro. J Neurochem 2013
66
8

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
8

Functional profiling of the Saccharomyces cerevisiae genome.
Guri Giaever, Angela M Chu, Li Ni, Carla Connelly, Linda Riles, Steeve Véronneau, Sally Dow, Ankuta Lucau-Danila, Keith Anderson, Bruno André,[...]. Nature 2002
8

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.
E A Winzeler, D D Shoemaker, A Astromoff, H Liang, K Anderson, B Andre, R Bangham, R Benito, J D Boeke, H Bussey,[...]. Science 1999
8

Screening patients for heterozygous p53 mutations using a functional assay in yeast.
C Ishioka, T Frebourg, Y X Yan, M Vidal, S H Friend, S Schmidt, R Iggo. Nat Genet 1993
237
8

Transactivation specificity is conserved among p53 family proteins and depends on a response element sequence code.
Yari Ciribilli, Paola Monti, Alessandra Bisio, H Thien Nguyen, Abdul S Ethayathulla, Ana Ramos, Giorgia Foggetti, Paola Menichini, Daniel Menendez, Michael A Resnick,[...]. Nucleic Acids Res 2013
32
9

Studying p53 family proteins in yeast: induction of autophagic cell death and modulation by interactors and small molecules.
Mariana Leão, Sara Gomes, Cláudia Bessa, Joana Soares, Liliana Raimundo, Paola Monti, Gilberto Fronza, Clara Pereira, Lucília Saraiva. Exp Cell Res 2015
14
21

Dominant-negative features of mutant TP53 in germline carriers have limited impact on cancer outcomes.
Paola Monti, Chiara Perfumo, Alessandra Bisio, Yari Ciribilli, Paola Menichini, Debora Russo, David M Umbach, Michael A Resnick, Alberto Inga, Gilberto Fronza. Mol Cancer Res 2011
48
8

Characterization of the p53 mutants ability to inhibit p73 beta transactivation using a yeast-based functional assay.
Paola Monti, Paola Campomenosi, Yari Ciribilli, Raffaella Iannone, Anna Aprile, Alberto Inga, Mitsuhiro Tada, Paola Menichini, Angelo Abbondandolo, Gilberto Fronza. Oncogene 2003
32
9

Dominant-negative p53 mutations selected in yeast hit cancer hot spots.
R K Brachmann, M Vidal, J D Boeke. Proc Natl Acad Sci U S A 1996
135
8

Oxygen stress: a regulator of apoptosis in yeast.
F Madeo, E Fröhlich, M Ligr, M Grey, S J Sigrist, D H Wolf, K U Fröhlich. J Cell Biol 1999
781
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.