A citation-based method for searching scientific literature

Valentina Ly, Avril Hatherell, Esther Kim, Ainsley Chan, Mark F Belmonte, Dana F Schroeder. Plant Sci 2013
Times Cited: 7







List of co-cited articles
69 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




DNA repair and recombination in higher plants: insights from comparative genomics of Arabidopsis and rice.
Sanjay K Singh, Sujit Roy, Swarup Roy Choudhury, Dibyendu N Sengupta. BMC Genomics 2010
42
42

Arabidopsis replication protein A 70a is required for DNA damage response and telomere length homeostasis.
Yoshiyuki Takashi, Yuki Kobayashi, Kan Tanaka, Katsunori Tamura. Plant Cell Physiol 2009
22
42

A higher plant has three different types of RPA heterotrimeric complex.
Toyotaka Ishibashi, Seisuke Kimura, Kengo Sakaguchi. J Biochem 2006
38
42


ATR and ATM play both distinct and additive roles in response to ionizing radiation.
Kevin M Culligan, Clare E Robertson, Julia Foreman, Peter Doerner, Anne B Britt. Plant J 2006
230
42

Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice.
Randall W Shultz, Vinaya M Tatineni, Linda Hanley-Bowdoin, William F Thompson. Plant Physiol 2007
104
42

Nucleotide excision repair in eukaryotes.
Orlando D Schärer. Cold Spring Harb Perspect Biol 2013
450
28

DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks.
Wanda M Waterworth, Jaroslav Kozak, Claire M Provost, Clifford M Bray, Karel J Angelis, Christopher E West. BMC Plant Biol 2009
44
28

Single-nucleotide and long-patch base excision repair of DNA damage in plants.
Dolores Córdoba-Cañero, Teresa Morales-Ruiz, Teresa Roldán-Arjona, Rafael R Ariza. Plant J 2009
37
28

Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis.
Cyril Charbonnel, Elisabeth Allain, Maria Eugenia Gallego, Charles I White. DNA Repair (Amst) 2011
72
28

Regulation and role of Arabidopsis CUL4-DDB1A-DDB2 in maintaining genome integrity upon UV stress.
Jean Molinier, Esther Lechner, Eva Dumbliauskas, Pascal Genschik. PLoS Genet 2008
77
28


Plant genome engineering with sequence-specific nucleases.
Daniel F Voytas. Annu Rev Plant Biol 2013
242
28


From bacteria to plants: a compendium of mismatch repair assays.
Claudia P Spampinato, Rodrigo L Gomez, Celina Galles, Luciana D Lario. Mutat Res 2009
24
28

Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.
Alma Balestrazzi, Massimo Confalonieri, Anca Macovei, Mattia Donà, Daniela Carbonera. Plant Cell Rep 2011
48
28

RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.
Anja Mannuss, Stefanie Dukowic-Schulze, Stefanie Suer, Frank Hartung, Michael Pacher, Holger Puchta. Plant Cell 2010
73
28

Repairing breaks in the plant genome: the importance of keeping it together.
Wanda M Waterworth, Georgina E Drury, Clifford M Bray, Christopher E West. New Phytol 2011
107
28

Poly(ADP-ribose)polymerases are involved in microhomology mediated back-up non-homologous end joining in Arabidopsis thaliana.
Qi Jia, Amke den Dulk-Ras, Hexi Shen, Paul J J Hooykaas, Sylvia de Pater. Plant Mol Biol 2013
53
28


Gene regulation in response to DNA damage.
Anja Mannuss, Oliver Trapp, Holger Puchta. Biochim Biophys Acta 2012
33
28


DNA damage response in plants: conserved and variable response compared to animals.
Kaoru Okamoto Yoshiyama, Kengo Sakaguchi, Seisuke Kimura. Biology (Basel) 2013
84
28

Evolution of mutation rates: phylogenomic analysis of the photolyase/cryptochrome family.
José Ignacio Lucas-Lledó, Michael Lynch. Mol Biol Evol 2009
57
28

Eukaryotic class II cyclobutane pyrimidine dimer photolyase structure reveals basis for improved ultraviolet tolerance in plants.
Kenichi Hitomi, Andrew S Arvai, Junpei Yamamoto, Chiharu Hitomi, Mika Teranishi, Tokuhisa Hirouchi, Kazuo Yamamoto, Shigenori Iwai, John A Tainer, Jun Hidema,[...]. J Biol Chem 2012
27
28


The requirement for recombination factors differs considerably between different pathways of homologous double-strand break repair in somatic plant cells.
Nadine Roth, Jacqueline Klimesch, Stefanie Dukowic-Schulze, Michael Pacher, Anja Mannuss, Holger Puchta. Plant J 2012
45
28


Molecular mechanisms of ultraviolet radiation-induced DNA damage and repair.
Rajesh P Rastogi, Richa, Ashok Kumar, Madhu B Tyagi, Rajeshwar P Sinha. J Nucleic Acids 2010
509
28

Mismatch recognition function of Arabidopsis thaliana MutSγ.
Rodrigo Gómez, Claudia P Spampinato. DNA Repair (Amst) 2013
15
28

Rapid generation of rice mutants via the dominant negative suppression of the mismatch repair protein OsPMS1.
Jie Xu, Meiru Li, Lei Chen, Guojiang Wu, Hongqing Li. Theor Appl Genet 2012
8
28

Postreplicative mismatch repair.
Josef Jiricny. Cold Spring Harb Perspect Biol 2013
206
28

Role of AtMSH7 in UV-B-induced DNA damage recognition and recombination.
Luciana Daniela Lario, Pablo Botta, Paula Casati, Claudia Patricia Spampinato. J Exp Bot 2015
16
28

Effects of suppressing the DNA mismatch repair system on homeologous recombination in tomato.
Sheh May Tam, John B Hays, Roger T Chetelat. Theor Appl Genet 2011
28
28

Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice.
Ayako Nishizawa-Yokoi, Satoko Nonaka, Hiroaki Saika, Yong-Ik Kwon, Keishi Osakabe, Seiichi Toki. New Phytol 2012
39
28


Regulation of plant MSH2 and MSH6 genes in the UV-B-induced DNA damage response.
Luciana D Lario, Elena Ramirez-Parra, Crisanto Gutierrez, Paula Casati, Claudia P Spampinato. J Exp Bot 2011
35
28


Characterization and comparative sequence analysis of the DNA mismatch repair MSH2 and MSH7 genes from tomato.
Sheh May Tam, Sompid Samipak, Anne Britt, Roger T Chetelat. Genetica 2009
8
28


Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants.
Cyril Charbonnel, Maria E Gallego, Charles I White. Plant J 2010
63
28

Rice UV-damaged DNA binding protein homologues are most abundant in proliferating tissues.
Toyotaka Ishibashi, Seisuke Kimura, Taichi Yamamoto, Tomoyuki Furukawa, Kei-ichi Takata, Yukinobu Uchiyama, Junji Hashimoto, Kengo Sakaguchi. Gene 2003
30
28

Cyclobutane pyrimidine dimer (CPD) photolyase repairs ultraviolet-B-induced CPDs in rice chloroplast and mitochondrial DNA.
Masaaki Takahashi, Mika Teranishi, Hiroyuki Ishida, Junji Kawasaki, Atsuko Takeuchi, Tomoyuki Yamaya, Masao Watanabe, Amane Makino, Jun Hidema. Plant J 2011
33
28

Three DNA polymerases, recruited by different mechanisms, carry out NER repair synthesis in human cells.
Tomoo Ogi, Siripan Limsirichaikul, René M Overmeer, Marcel Volker, Katsuya Takenaka, Ross Cloney, Yuka Nakazawa, Atsuko Niimi, Yoshio Miki, Nicolaas G Jaspers,[...]. Mol Cell 2010
255
28

The DNA repair protein XRCC1 functions in the plant DNA demethylation pathway by stimulating cytosine methylation (5-meC) excision, gap tailoring, and DNA ligation.
María Isabel Martínez-Macías, Dolores Córdoba-Cañero, Rafael R Ariza, Teresa Roldán-Arjona. J Biol Chem 2013
20
28

Yeast mutator phenotype enforced by Arabidopsis PMS1 expression.
Celina Galles, Claudia P Spampinato. Mol Biol Rep 2013
5
40

Characterization of the plant homolog of Nijmegen breakage syndrome 1: Involvement in DNA repair and recombination.
Noriyuki Akutsu, Kenta Iijima, Takeo Hinata, Hiroshi Tauchi. Biochem Biophys Res Commun 2007
25
28

Arabidopsis ARP endonuclease functions in a branched base excision DNA repair pathway completed by LIG1.
Dolores Córdoba-Cañero, Teresa Roldán-Arjona, Rafael R Ariza. Plant J 2011
32
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.