A citation-based method for searching scientific literature

C Thomas Caskey, Manuel L Gonzalez-Garay, Stacey Pereira, Amy L McGuire. Annu Rev Med 2014
Times Cited: 10







List of co-cited articles
34 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Personalized genomic disease risk of volunteers.
Manuel L Gonzalez-Garay, Amy L McGuire, Stacey Pereira, C Thomas Caskey. Proc Natl Acad Sci U S A 2013
30
60

The diploid genome sequence of an individual human.
Samuel Levy, Granger Sutton, Pauline C Ng, Lars Feuk, Aaron L Halpern, Brian P Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F Kirkness, Gennady Denisov,[...]. PLoS Biol 2007
40

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
40

Clinical whole-exome sequencing for the diagnosis of mendelian disorders.
Yaping Yang, Donna M Muzny, Jeffrey G Reid, Matthew N Bainbridge, Alecia Willis, Patricia A Ward, Alicia Braxton, Joke Beuten, Fan Xia, Zhiyv Niu,[...]. N Engl J Med 2013
30

Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
30

The complete genome of an individual by massively parallel DNA sequencing.
David A Wheeler, Maithreyan Srinivasan, Michael Egholm, Yufeng Shen, Lei Chen, Amy McGuire, Wen He, Yi-Ju Chen, Vinod Makhijani, G Thomas Roth,[...]. Nature 2008
30

The sequence of the human genome.
J C Venter, M D Adams, E W Myers, P W Li, R J Mural, G G Sutton, H O Smith, M Yandell, C A Evans, R A Holt,[...]. Science 2001
30

Clinical assessment incorporating a personal genome.
Euan A Ashley, Atul J Butte, Matthew T Wheeler, Rong Chen, Teri E Klein, Frederick E Dewey, Joel T Dudley, Kelly E Ormond, Aleksandra Pavlovic, Alexander A Morgan,[...]. Lancet 2010
461
30

Deep sequencing of 10,000 human genomes.
Amalio Telenti, Levi C T Pierce, William H Biggs, Julia di Iulio, Emily H M Wong, Martin M Fabani, Ewen F Kirkness, Ahmed Moustafa, Naisha Shah, Chao Xie,[...]. Proc Natl Acad Sci U S A 2016
158
30

Whole-genome sequencing identifies common-to-rare variants associated with human blood metabolites.
Tao Long, Michael Hicks, Hung-Chun Yu, William H Biggs, Ewen F Kirkness, Cristina Menni, Jonas Zierer, Kerrin S Small, Massimo Mangino, Helen Messier,[...]. Nat Genet 2017
148
30

Plasma metabolomic profiles enhance precision medicine for volunteers of normal health.
Lining Guo, Michael V Milburn, John A Ryals, Shaun C Lonergan, Matthew W Mitchell, Jacob E Wulff, Danny C Alexander, Anne M Evans, Brandi Bridgewater, Luke Miller,[...]. Proc Natl Acad Sci U S A 2015
92
30

ClinVar: public archive of interpretations of clinically relevant variants.
Melissa J Landrum, Jennifer M Lee, Mark Benson, Garth Brown, Chen Chao, Shanmuga Chitipiralla, Baoshan Gu, Jennifer Hart, Douglas Hoffman, Jeffrey Hoover,[...]. Nucleic Acids Res 2016
30

Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays.
Radoje Drmanac, Andrew B Sparks, Matthew J Callow, Aaron L Halpern, Norman L Burns, Bahram G Kermani, Paolo Carnevali, Igor Nazarenko, Geoffrey B Nilsen, George Yeung,[...]. Science 2010
747
20

A map of human genome variation from population-scale sequencing.
Gonçalo R Abecasis, David Altshuler, Adam Auton, Lisa D Brooks, Richard M Durbin, Richard A Gibbs, Matt E Hurles, Gil A McVean. Nature 2010
20

Real-time DNA sequencing from single polymerase molecules.
John Eid, Adrian Fehr, Jeremy Gray, Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman,[...]. Science 2009
20

Finding the missing heritability of complex diseases.
Teri A Manolio, Francis S Collins, Nancy J Cox, David B Goldstein, Lucia A Hindorff, David J Hunter, Mark I McCarthy, Erin M Ramos, Lon R Cardon, Aravinda Chakravarti,[...]. Nature 2009
20

A public resource facilitating clinical use of genomes.
Madeleine P Ball, Joseph V Thakuria, Alexander Wait Zaranek, Tom Clegg, Abraham M Rosenbaum, Xiaodi Wu, Misha Angrist, Jong Bhak, Jason Bobe, Matthew J Callow,[...]. Proc Natl Acad Sci U S A 2012
117
20


Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy.
James R Lupski, Jeffrey G Reid, Claudia Gonzaga-Jauregui, David Rio Deiros, David C Y Chen, Lynne Nazareth, Matthew Bainbridge, Huyen Dinh, Chyn Jing, David A Wheeler,[...]. N Engl J Med 2010
519
20

ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
20


Targeted enrichment beyond the consensus coding DNA sequence exome reveals exons with higher variant densities.
Matthew N Bainbridge, Min Wang, Yuanqing Wu, Irene Newsham, Donna M Muzny, John L Jefferies, Thomas J Albert, Daniel L Burgess, Richard A Gibbs. Genome Biol 2011
144
20

The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine.
Jason L Vassy, Denise M Lautenbach, Heather M McLaughlin, Sek Won Kong, Kurt D Christensen, Joel Krier, Isaac S Kohane, Lindsay Z Feuerman, Jennifer Blumenthal-Barby, J Scott Roberts,[...]. Trials 2014
101
20

'Someday it will be the norm': physician perspectives on the utility of genome sequencing for patient care in the MedSeq Project.
Jason L Vassy, Kurt D Christensen, Melody J Slashinski, Denise M Lautenbach, Sridharan Raghavan, Jill Oliver Robinson, Jennifer Blumenthal-Barby, Lindsay Zausmer Feuerman, Lisa Soleymani Lehmann, Michael F Murray,[...]. Per Med 2015
27
20

Actionable, pathogenic incidental findings in 1,000 participants' exomes.
Michael O Dorschner, Laura M Amendola, Emily H Turner, Peggy D Robertson, Brian H Shirts, Carlos J Gallego, Robin L Bennett, Kelly L Jones, Mari J Tokita, James T Bennett,[...]. Am J Hum Genet 2013
268
20

Health behavior changes after genetic risk assessment for Alzheimer disease: The REVEAL Study.
Serena Chao, J Scott Roberts, Theresa M Marteau, Rebecca Silliman, L Adrienne Cupples, Robert C Green. Alzheimer Dis Assoc Disord 2008
152
20

A new initiative on precision medicine.
Francis S Collins, Harold Varmus. N Engl J Med 2015
20

We screen newborns, don't we?: realizing the promise of public health genomics.
James P Evans, Jonathan S Berg, Andrew F Olshan, Terry Magnuson, Barbara K Rimer. Genet Med 2013
44
20

Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): a policy statement of the American College of Medical Genetics and Genomics.
Sarah S Kalia, Kathy Adelman, Sherri J Bale, Wendy K Chung, Christine Eng, James P Evans, Gail E Herman, Sophia B Hufnagel, Teri E Klein, Bruce R Korf,[...]. Genet Med 2017
799
20


Restriction spectrum imaging: An evolving imaging biomarker in prostate MRI.
Ryan L Brunsing, Natalie M Schenker-Ahmed, Nathan S White, J Kellogg Parsons, Christopher Kane, Joshua Kuperman, Hauke Bartsch, Andrew Karim Kader, Rebecca Rakow-Penner, Tyler M Seibert,[...]. J Magn Reson Imaging 2017
18
20

Whole genome sequencing in support of wellness and health maintenance.
Chirag J Patel, Ambily Sivadas, Rubina Tabassum, Thanawadee Preeprem, Jing Zhao, Dalia Arafat, Rong Chen, Alexander A Morgan, Gregory S Martin, Kenneth L Brigham,[...]. Genome Med 2013
33
20

Towards precision medicine.
Euan A Ashley. Nat Rev Genet 2016
236
20

Clinical Sequencing Exploratory Research Consortium: Accelerating Evidence-Based Practice of Genomic Medicine.
Robert C Green, Katrina A B Goddard, Gail P Jarvik, Laura M Amendola, Paul S Appelbaum, Jonathan S Berg, Barbara A Bernhardt, Leslie G Biesecker, Sawona Biswas, Carrie L Blout,[...]. Am J Hum Genet 2016
23
20

FASTSNP: an always up-to-date and extendable service for SNP function analysis and prioritization.
Hsiang-Yu Yuan, Jen-Jie Chiou, Wen-Hsien Tseng, Chia-Hung Liu, Chuan-Kun Liu, Yi-Jung Lin, Hui-Hung Wang, Adam Yao, Yuan-Tsong Chen, Chun-Nan Hsu. Nucleic Acids Res 2006
422
10

Accurate multiplex polony sequencing of an evolved bacterial genome.
Jay Shendure, Gregory J Porreca, Nikos B Reppas, Xiaoxia Lin, John P McCutcheon, Abraham M Rosenbaum, Michael D Wang, Kun Zhang, Robi D Mitra, George M Church. Science 2005
716
10

A combined functional annotation score for non-synonymous variants.
Margarida C Lopes, Chris Joyce, Graham R S Ritchie, Sally L John, Fiona Cunningham, Jennifer Asimit, Eleftheria Zeggini. Hum Hered 2012
67
10

Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0.
Yves Dehouck, Aline Grosfils, Benjamin Folch, Dimitri Gilis, Philippe Bogaerts, Marianne Rooman. Bioinformatics 2009
221
10




ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
10

Comprehensive statistical study of 452 BRCA1 missense substitutions with classification of eight recurrent substitutions as neutral.
S V Tavtigian, A M Deffenbaugh, L Yin, T Judkins, T Scholl, P B Samollow, D de Silva, A Zharkikh, A Thomas. J Med Genet 2006
473
10

Unlocking Mendelian disease using exome sequencing.
Christian Gilissen, Alexander Hoischen, Han G Brunner, Joris A Veltman. Genome Biol 2011
183
10

Comparing a few SNP calling algorithms using low-coverage sequencing data.
Xiaoqing Yu, Shuying Sun. BMC Bioinformatics 2013
69
10

Tools for mapping high-throughput sequencing data.
Nuno A Fonseca, Johan Rung, Alvis Brazma, John C Marioni. Bioinformatics 2012
136
10

Genome sequencing in microfabricated high-density picolitre reactors.
Marcel Margulies, Michael Egholm, William E Altman, Said Attiya, Joel S Bader, Lisa A Bemben, Jan Berka, Michael S Braverman, Yi-Ju Chen, Zhoutao Chen,[...]. Nature 2005
10

COSMIC (the Catalogue of Somatic Mutations in Cancer): a resource to investigate acquired mutations in human cancer.
Simon A Forbes, Gurpreet Tang, Nidhi Bindal, Sally Bamford, Elisabeth Dawson, Charlotte Cole, Chai Yin Kok, Mingming Jia, Rebecca Ewing, Andrew Menzies,[...]. Nucleic Acids Res 2010
405
10


MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data.
Gilad Wainreb, Haim Ashkenazy, Yana Bromberg, Alina Starovolsky-Shitrit, Turkan Haliloglu, Eytan Ruppin, Karen B Avraham, Burkhard Rost, Nir Ben-Tal. Nucleic Acids Res 2010
25
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.